Nina Baumgarten

发表

Computational prediction of CRISPR-impaired non-coding regulatory regions

Marcel H. Schulz, Florian Schmidt, Nina Baumgarten, 2020, bioRxiv.

Integrative analysis of epigenetics data identifies gene-specific regulatory elements

Marcel H. Schulz, Jilles Vreeken, Florian Schmidt, 2019, bioRxiv.

EpiRegio: analysis and retrieval of regulatory elements linked to genes

Marcel H. Schulz, Florian Schmidt, Sivarajan Karunanithi, 2020, Nucleic Acids Res..

The epigenetic modifier DOT1L regulates gene regulatory networks necessary for cardiac patterning and cardiomyocyte cell cycle withdrawal

Marcel H. Schulz, G. Condorelli, S. Heinz, 2022, bioRxiv.

Single cell sequencing reveals endothelial plasticity with transient mesenchymal activation after myocardial infarction

Marcel H. Schulz, Milena B. Furtado, N. Rosenthal, 2020, Nature Communications.

TF-Prioritizer: a java pipeline to prioritize condition-specific transcription factors

Marcel H. Schulz, David B. Blumenthal, J. Baumbach, 2022, bioRxiv.

TF-Prioritizer: a java pipeline to prioritize condition-specific transcription factors

Marcel H. Schulz, David B. Blumenthal, J. Baumbach, 2023, bioRxiv.

A statistical approach to identify regulatory DNA variations

Marcel H. Schulz, Nina Baumgarten, T. Kessler, 2023, bioRxiv.

TEPIC 2—an extended framework for transcription factor binding prediction and integrative epigenomic analysis

Nina Baumgarten, Marcel H. Schulz, Fabian Kern, 2018, Bioinform..

Improved linking of motifs to their TFs using domain information

Nina Baumgarten, Florian Schmidt, Marcel H Schulz, 2019, Bioinform..

DOT1L regulates chamber-specific transcriptional networks during cardiogenesis and mediates postnatal cell cycle withdrawal

Marcel H. Schulz, G. Condorelli, S. Heinz, 2022, Nature Communications.

Circular RNA circPLOD2 regulates pericyte function by targeting the transcription factor KLF4

Marcel H. Schulz, Ranjan Kumar Maji, S. Dimmeler, 2022, bioRxiv.

TF-Prioritizer: a Java pipeline to prioritize condition-specific transcription factors

Marcel H. Schulz, David B. Blumenthal, J. Baumbach, 2022, bioRxiv.

CVD-associated SNPs with regulatory potential drive pathologic non-coding RNA expression

Marcel H. Schulz, Fatemeh Behjati Ardakani, S. Dimmeler, 2023, bioRxiv.

BALL-SNPgp - from genetic variants toward computational diagnostics

Sabine C. Mueller, Christina Backes, Eckart Meese, 2016, Bioinform..

CVD-associated SNPs with regulatory potential reveal novel non-coding disease genes

Fatemeh Behjati Ardakani, S. Dimmeler, Nina Baumgarten, 2023, Human Genomics.