R. Erbe

Matrix factorization and transfer learning uncover regulatory biology across multiple single-cell ATAC-seq data sets

Alexander V. Favorov, Daria A. Gaykalova, E. Fertig, 2020, Nucleic acids research.

Matrix factorization and transfer learning uncover regulatory biology across multiple single-cell ATAC-seq data sets

Daria A. Gaykalova, A. Favorov, E. Fertig, 2020, bioRxiv.

Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma

Alexander V. Favorov, Daria A. Gaykalova, Ludmila V. Danilova, 2020, Epigenetics.

Spatial transcriptomics of FFPE pancreatic intraepithelial neoplasias reveals cellular and molecular alterations of progression to pancreatic ductal carcinoma

Luciane T. Kagohara, L. Wood, E. Jaffee, 2022, bioRxiv.

Transcriptomic forecasting with neural ODEs

E. Fertig, R. Erbe, G. Stein-O’Brien, 2022, bioRxiv.