A. Chakrabarti

发表

Towards kinetic modeling of genome-scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints.

Keng C. Soh, V. Hatzimanikatis, L. Miskovic, 2013, Biotechnology journal.

Identification of metabolic engineering targets for the enhancement of 1,4-butanediol production in recombinant E. coli using large-scale kinetic models.

Keng C. Soh, V. Hatzimanikatis, A. Burgard, 2016, Metabolic engineering.

Integrative phenotyping of glycemic responders upon clinical weight loss using multi-omics

A. Valsesia, A. Astrup, W. Saris, 2020, Scientific Reports.

The microbiota–gut–brain axis: pathways to better brain health. Perspectives on what we know, what we need to investigate and how to put knowledge into practice

P. Iozzo, A. Kraneveld, Dr David Vauzour, 2022, Cellular and Molecular Life Sciences.

Population heterogeneity in the epithelial to mesenchymal transition is controlled by NFAT and phosphorylated Sp1

Russell A. Gould, J. Varner, J. Butcher, 2015, bioRxiv.

Discovery and validation of temporal patterns involved in human brain ketometabolism in cerebral microdialysis fluids of traumatic brain injury patients

M. Eiden, B. Cuenoud, M. Masoodi, 2019, EBioMedicine.

Impact of multi-micronutrient supplementation on lipidemia of children and adolescents.

M. Eiden, M. Masoodi, J. Kaput, 2020, Clinical nutrition.

Differential Metabolism of Medium-Chain Fatty Acids in Differentiated Human-Induced Pluripotent Stem Cell-Derived Astrocytes

A. Wiederkehr, M. Masoodi, A. Chakrabarti, 2019, Front. Physiol..

Transcriptomics-driven lipidomics (TDL) identifies the microbiome-regulated targets of ileal lipid metabolism

Stephen J. Bruce, M. Membrez, Jay Siddharth, 2017, npj Systems Biology and Applications.

Exploring Valine Metabolism in Astrocytic and Liver Cells: Lesson from Clinical Observation in TBI Patients for Nutritional Intervention

A. Wiederkehr, M. Masoodi, A. Chakrabarti, 2020, Biomedicines.

Mechanistic Modeling and Analysis of the Mammalian Unfolded Protein Response

Jeffrey D. Varner, Anirikh Chakrabarti, Lina Aboulmouna, 2016, bioRxiv.

Menstrual cycle rhythmicity: metabolic patterns in healthy women

T. Hankemeier, J. van der Greef, L. Brennan, 2018, Scientific Reports.

Effect of erythritol and xylitol on Streptococcus pyogenes causing peritonsillar abscesses

R. Mändar, P. Kasenõmm, A. Chakrabarti, 2021, Scientific Reports.

Complete Genome Sequence of Escherichia coli Strain M8, Isolated from ob/ob Mice

M. Membrez, Jay Siddharth, C. Chou, 2017, Genome Announcements.

Perspective: Leveraging the Gut Microbiota to Predict Personalized Responses to Dietary, Prebiotic, and Probiotic Interventions

S. Gibbons, Thomas Gurry, J. Lampe, 2022, Advances in nutrition.

Multiscale Models of Breast Cancer Progression

A. Stroock, J. Varner, S. Verbridge, 2012, Annals of Biomedical Engineering.

Computational Modeling and Analysis of Insulin Induced Eukaryotic Translation Initiation

Jeffrey D. Varner, Anirikh Chakrabarti, Satyaprakash Nayak, 2011, PLoS Comput. Biol..

Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1

Jeffrey D. Varner, Anirikh Chakrabarti, Jonathan T. Butcher, 2015, bioRxiv.

Ensembles of signal transduction models using Pareto Optimal Ensemble Techniques (POETs).

Sang Ok Song, Anirikh Chakrabarti, Jeffrey D Varner, 2010, Biotechnology journal.

Integrative phenotyping of glycemic responders upon clinical weight loss using multi-omics

A. Valsesia, A. Astrup, W. Saris, 2020, Scientific Reports.

A review of the mammalian unfolded protein response

J. Varner, A. Chakrabarti, Aaron W Chen, 2011, Biotechnology and bioengineering.

Systems Analysis Of Core Architectures Regulating Cellular Responses Under Stress In Eukaryotes

Anirikh Chakrabarti, A. Chakrabarti, 2012 .

Menstrual cycle rhythmicity: metabolic patterns in healthy women

T. Hankemeier, J. van der Greef, L. Brennan, 2018, Scientific Reports.

Aging and sarcopenia associate with specific interactions between gut microbes, serum biomarkers and host physiology in rats

Jay Siddharth, M. Masoodi, J. Feige, 2017, Aging.

Saccharomyces cerevisiae fermentation product improves robustness of equine gut microbiome upon stress

E. Ganda, E. Khafipour, B. Kozlowicz, 2023, Frontiers in Veterinary Science.

Modeling The Unfolded Protein Response And Its Connection To Cellular Stress

Anirikh Chakrabarti, A. Chakrabarti, 2009 .

Physicochemical regulation of endothelial sprouting in a 3D microfluidic angiogenesis model.

A. Stroock, J. Varner, S. Verbridge, 2013, Journal of biomedical materials research. Part A.

Resolving microbial membership using Abundance and Variability In Taxonomy (‘AVIT )

C. Lauber, Z. Pataky, A. Golay, 2016, Scientific Reports.

Cohort Specific Effects of Cereal-bar Supplementation in Overweight Patients With or Without Type 2 Diabetes Mellitus

Z. Pataky, A. Golay, Jay Siddharth, 2016, bioRxiv.

Title : Cohort Specific Effects Fiber Supplementation in Overweight Patients With 1 or Without Type 2 Diabetes Mellitus 2 3 Short Title : Cohort specific effects of diet supplementation 4 5 6 7

C. Lauber, Z. Pataky, A. Golay, 2017 .

Exploration of singular and synergistic effect of xylitol and erythritol on causative agents of dental caries

R. Mändar, A. Chakrabarti, S. Kõljalg, 2020, Scientific Reports.

Transcriptomics-driven lipidomics (TDL) identifies the microbiome-regulated targets of ileal lipid metabolism

Stephen J. Bruce, M. Membrez, Jay Siddharth, 2017, npj Systems Biology and Applications.