I. Jakovlić

发表

The complete mitochondrial genome of parasitic nematode Camallanus cotti: extreme discontinuity in the rate of mitogenomic architecture evolution within the Chromadorea class

H. Zou, Gui-tang Wang, Dong Zhang, 2017, BMC Genomics.

Mitochondrial architecture rearrangements produce asymmetrical nonadaptive mutational pressures that subvert the phylogenetic reconstruction in Isopoda

F. Al-Misned, S. Mahboob, K. Al-Ghanim, 2019, bioRxiv.

Mitochondrial Architecture Rearrangements Produce Asymmetrical Nonadaptive Mutational Pressures That Subvert the Phylogenetic Reconstruction in Isopoda

F. Al-Misned, S. Mahboob, K. Al-Ghanim, 2019, bioRxiv.

Population size may shape the accumulation of functional mutations following domestication

Shuhong Zhao, Xinyun Li, I. Jakovlić, 2018, BMC Evolutionary Biology.

Sequencing of the complete mitochondrial genome of a fish-parasitic flatworm Paratetraonchoides inermis (Platyhelminthes: Monogenea): tRNA gene arrangement reshuffling and implications for phylogeny

S. Wu, H. Zou, Ming Li, 2017, Parasites & Vectors.

Adhesion and colonization properties of potentially probiotic Bacillus paralicheniformis strain FA6 isolated from grass carp intestine

Fan Xiong, S. Wu, I. Jakovlić, 2019, Fisheries Science.

Chemotactic effect of &bgr;‐defensin 1 on macrophages in Megalobrama amblycephala

Xiaoling Liu, I. Jakovlić, Jianguo Su, 2018, Fish & shellfish immunology.

1H NMR-based metabolomics approach reveals metabolic alterations in response to dietary imbalances in Megalobrama amblycephala

I. Jakovlić, Weimin Wang, Yu-Hua Zhao, 2017, Metabolomics.

Dietary Bile Salt Types Influence the Composition of Biliary Bile Acids and Gut Microbiota in Grass Carp

Fan Xiong, S. Wu, H. Zou, 2018, Front. Microbiol..

Blunt Snout Bream (Megalobrama amblycephala) MyD88 and TRAF6: Characterisation, Comparative Homology Modelling and Expression

I. Jakovlić, Weimin Wang, N. T. Tran, 2015, International journal of molecular sciences.

Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea).

S. Wu, H. Zou, Ming Li, 2019, International journal of biological macromolecules.

Dietary betaine reduces liver lipid accumulation via improvement of bile acid and trimethylamine-N-oxide metabolism in blunt-snout bream.

Jia Xu, I. Jakovlić, Weimin Wang, 2019, Food & function.

Reproductive strategy of the invasive sharpbelly, Hemiculter leucisculus (Basilewsky 1855), in Erhai Lake, China.

D. Huang, I. Jakovlić, T. Wang, 2016 .

Inverted base composition skews and discontinuous mitochondrial genome architecture evolution in the Enoplea (Nematoda)

H. Zou, Ming Li, I. Jakovlić, 2022, BMC genomics.

Disentangling the interplay of positive and negative selection forces that shaped mitochondrial genomes of Gammarus pisinnus and Gammarus lacustris

X. Ge, Jian Zhu, F. Al-Misned, 2020, Royal Society Open Science.

The nanopore sequencing of a Chinese rhesus macaque revealed patterns of methylation, recombination, and selection for structural variations

Hao Yang, C. Fan, I. Jakovlić, 2022, bioRxiv.

Positive selection-driven fixation of a hominin-specific amino acid mutation related to dephosphorylation in IRF9

I. Jakovlić, Jianhai Chen, Xuefei He, 2022, BMC Ecology and Evolution.

Drivers of interlineage variability in mitogenomic evolutionary rates in flatworms (Platyhelminthes) are multifactorial

H. Zou, Dong Zhang, I. Jakovlić, 2022, bioRxiv.

Identification, origin and evidence for retained functionality of two IκBα paralogs in Megalobrama amblycephala.

Han Liu, I. Jakovlić, Weimin Wang, 2016, Developmental and comparative immunology.

Tandem duplication of two tRNA genes in the mitochondrial genome of Tagiades vajuna (Lepidoptera: Hesperiidae)

I. Jakovlić, Yi-ping Li, Xiangqun Yuan, 2017 .

Host's P85α genotype restructures the gut microbiota and regulates fat metabolism in gibel carp

S. Wu, H. Zou, Ming Li, 2022, Aquaculture.

Effects of the total fish meal replacement by soybean meal on growth parameters, serum biochemistry, and hepatic and intestinal histology of juvenile blunt snout bream (Megalobrama amblycephala)

I. Jakovlić, Weimin Wang, Yu-Hua Zhao, 2018, Journal of Applied Aquaculture.

Impacts of diet on hindgut microbiota and short-chain fatty acids in grass carp (Ctenopharyngodon idellus )

S. Wu, H. Zou, Wen X Li, 2017 .

PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

Jin Zhang, Dong Zhang, Hong Zou, 2018, bioRxiv.

The first report of diablo in Megalobrama amblycephala: characterization, phylogenetic analysis, functional annotation and expression

I. Jakovlić, Weimin Wang, N. T. Tran, 2017, Journal of Genetics.

Three new Diplozoidae mitogenomes expose unusual compositional biases within the Monogenea class: implications for phylogenetic studies

S. Wu, H. Zou, Ming Li, 2018, BMC Evolutionary Biology.

Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae)

H. Zou, I. Jakovlić, R. Chen, 2017, Journal of Helminthology.

Molecular cloning and expression of toll-like receptor 4 (tlr4) in the blunt snout bream (Megalobrama amblycephala).

Han Liu, I. Jakovlić, Weimin Wang, 2016, Developmental and comparative immunology.

Homoplasy or plesiomorphy? Reconstruction of the evolutionary history of mitochondrial gene order rearrangements in the subphylum Neodermata.

S. Wu, H. Zou, Ming Li, 2019, International journal for parasitology.

Mitochondrial genomes of two diplectanids (Platyhelminthes: Monogenea) expose paraphyly of the order Dactylogyridea and extensive tRNA gene rearrangements

S. Wu, H. Zou, Ming Li, 2018, Parasites & Vectors.

Mitochondrial Genomes of Two Thaparocleidus Species (Platyhelminthes: Monogenea) Reveal the First rRNA Gene Rearrangement among the Neodermata

S. Wu, H. Zou, Ming Li, 2019, International journal of molecular sciences.

Life history traits and implications for conservation of rock carp Procypris rabaudi Tchang, an endemic fish in the upper Yangtze River, China

I. Jakovlić, Xin Gao, Huan-zhang Liu, 2015, Fisheries Science.

A chromosome-level genome assembly of Cairina moschata and comparative genomic analyses

W. Sung, Xiaoyong Du, I. Jakovlić, 2021, BMC genomics.

Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus

Fan Xiong, S. Wu, H. Zou, 2019, AMB Express.

Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus

Fan Xiong, S. Wu, H. Zou, 2018, AMB Express.

Identification of neuropeptides from eyestalk transcriptome profiling analysis of female oriental river prawn (Macrobrachium nipponense) under hypoxia and reoxygenation conditions.

X. Ge, H. Fu, H. Qiao, 2019, Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.

Sequencing of the complete mitochondrial genomes of eight freshwater snail species exposes pervasive paraphyly within the Viviparidae family (Caenogastropoda)

Dong Zhang, I. Jakovlić, Weimin Wang, 2017, PloS one.

Morphology is not a reliable taxonomic tool for the genus Lernaea: molecular data and experimental infection reveal that L. cyprinacea and L. cruciata are conspecific

S. Wu, H. Zou, Ming Li, 2019, Parasites & Vectors.

Dietary habits of invasive Ponto-Caspian gobies in the Croatian part of the Danube River basin and their potential impact on benthic fish communities.

G. Jakšić, I. Jakovlić, M. Piria, 2016, The Science of the total environment.

Gene expression patterns indicate that a high-fat-high-carbohydrate diet causes mitochondrial dysfunction in fish.

I. Jakovlić, Weimin Wang, Shaokui Yi, 2019, Genome.

The complete mitochondrial genome of Cymothoa indica has a highly rearranged gene order and clusters at the very base of the Isopoda clade

F. Al-Misned, S. Mahboob, K. Al-Ghanim, 2018, PloS one.

First record of round goby, Neogobius melanostomus (Pallas, 1814) in the Sava River, Croatia

I. Jakovlić, N. Šprem, M. Piria, 2011 .

Life tables and elasticity analyses of Yangtze River fish species with implications for conservation and management

I. Jakovlić, X. Gao, Huan-zhang Liu, 2017, Reviews in Fish Biology and Fisheries.

Evidence for Adaptive Selection in the Mitogenome of a Mesoparasitic Monogenean Flatworm Enterogyrus malmbergi

S. Wu, H. Zou, Ming Li, 2019, Genes.

Architectural instability, inverted skews and mitochondrial phylogenomics of Isopoda: outgroup choice affects the long-branch attraction artefacts

H. Zou, Ming Li, Dong Zhang, 2020, Royal Society Open Science.

Basal position of two new complete mitochondrial genomes of parasitic Cymothoida (Crustacea: Isopoda) challenges the monophyly of the suborder and phylogeny of the entire order

S. Wu, H. Zou, Ming Li, 2018, Parasites & Vectors.

Morphology is not a reliable taxonomic tool for the genus Lernaea: molecular data and experimental infection reveal that L. cyprinacea and L. cruciata are conspecific

S. Wu, H. Zou, Ming Li, 2019, Parasites & Vectors.

Recent invasion and low level of divergence between diploid and triploid forms of Carassius auratus complex in Croatia

I. Jakovlić, J. Gui, 2011, Genetica.

The mitochondrial genome of Heterosentis pseudobagri (Wang & Zhang, 1987) Pichelin & Cribb, 1999 reveals novel aspects of tRNA genes evolution in Acanthocephala

I. Jakovlić, Hao Wu, R. Song, 2023, BMC Genomics.

Using PhyloSuite for molecular phylogeny and tree‐based analyses

H. Zou, I. Jakovlić, Hong Zhang, 2023, iMeta.

Slow crabs ‐ fast genomes: Locomotory capacity predicts skew magnitude in crustacean mitogenomes

Jianquan Liu, H. Zou, Dong Zhang, 2021, Molecular ecology.

Characterization and expression of Megalobrama amblycephala toll-like receptor 22 involved in the response to Aeromonas hydrophila.

I. Jakovlić, F. Zhan, R. Lai, 2017, Journal of fish biology.

Evolutionary history of inversions in the direction of architecture-driven mutational pressures in crustacean mitochondrial genomes

H. Zou, Dong Zhang, I. Jakovlić, 2020, bioRxiv.

Evolutionary History of Inversions in Directional Mutational Pressures in Crustacean Mitochondrial Genomes: Implications for Evolutionary Studies.

H. Zou, Dong Zhang, I. Jakovlić, 2021, Molecular phylogenetics and evolution.

Mitochondrial genomes of two diplectanids (Platyhelminthes: Monogenea) expose paraphyly of the order Dactylogyridea and extensive tRNA gene rearrangements

S. Wu, H. Zou, Ming Li, 2018, Parasites & Vectors.

Sequencing of the complete mitochondrial genome of a fish-parasitic flatworm Paratetraonchoides inermis (Platyhelminthes: Monogenea): tRNA gene arrangement reshuffling and implications for phylogeny

S. Wu, H. Zou, Ming Li, 2017, Parasites & Vectors.

The missing human baculum: a victim of conspecific aggression and budding self‐awareness?

I. Jakovlić, 2021 .

Evolutionary rates of mitochondrial sequences and gene orders in Spirurina (Nematoda) are episodic but synchronised

H. Zou, Ming Li, I. Jakovlić, 2022, Water Biology and Security.

The complete mitochondrial genome of parasitic nematode Camallanus cotti: extreme discontinuity in the rate of mitogenomic architecture evolution within the Chromadorea class

H. Zou, Dong Zhang, I. Jakovlić, 2017, BMC Genomics.

Transcriptomics, metabolomics and histology indicate that high-carbohydrate diet negatively affects the liver health of blunt snout bream (Megalobrama amblycephala)

Han Liu, I. Jakovlić, Weimin Wang, 2017, BMC Genomics.

Identification, characterization and expression in response to Aeromonas hydrophila challenge of five interferon regulatory factors in Megalobrama amblycephala

I. Jakovlić, Weimin Wang, F. Zhan, 2019, Fish & shellfish immunology.

Parasitism and locomotory capacity calibrate the mitogenomic evolutionary rates in Bilateria

H. Zou, Xiang Liu, I. Jakovlić, 2023, bioRxiv.

Disrupted architecture and fast evolution of the mitochondrial genome of Argeia pugettensis (Isopoda): implications for speciation and fitness

I. Jakovlić, Jianmei An, Junli Jia, 2020, BMC Genomics.

Expression of Hox paralog group 13 genes in adult and developing Megalobrama amblycephala.

I. Jakovlić, Weimin Wang, Ivan Jakovlić, 2016, Gene expression patterns : GEP.

Expression and functional characterization of interferon regulatory factors (irf2, irf7 and irf9) in the blunt snout bream (Megalobrama amblycephala)

Han Liu, I. Jakovlić, Weimin Wang, 2017, Developmental and comparative immunology.

Molecular identification and functional characterisation of the interferon regulatory factor 1 in the blunt snout bream (Megalobrama amblycephala).

Han Liu, I. Jakovlić, Weimin Wang, 2016, Fish & shellfish immunology.

The Role of Intestinal Microbiota in Regulating the Metabolism of Bile Acids Is Conserved Across Vertebrates

Fan Xiong, S. Wu, H. Zou, 2022, Frontiers in Microbiology.

In silico characterisation, homology modelling and structure-based functional annotation of blunt snout bream (Megalobrama amblycephala) Hsp70 and Hsc70 proteins

I. Jakovlić, Weimin Wang, N. T. Tran, 2015, Journal of animal science and technology.

Population size may shape the accumulation of functional mutations following domestication

Shuhong Zhao, Xinyun Li, I. Jakovlić, 2018, BMC Evolutionary Biology.

Metabolite and gene expression profiles suggest a putative mechanism through which high dietary carbohydrates reduce the content of hepatic betaine in Megalobrama amblycephala

Jia Xu, I. Jakovlić, Jun-tao Li, 2018, Metabolomics.

Succession and Fermentation Products of Grass Carp (Ctenopharyngodon idellus) Hindgut Microbiota in Response to an Extreme Dietary Shift

Fan Xiong, S. Wu, H. Zou, 2017, Front. Microbiol..

Regulation of lipid metabolism by gut microbiota in aquatic animals

S. Wu, H. Zou, I. Jakovlić, 2023, Reviews in Aquaculture.

Basal position of two new complete mitochondrial genomes of parasitic Cymothoida (Crustacea: Isopoda) challenges the monophyly of the suborder and phylogeny of the entire order

S. Wu, H. Zou, Ming Li, 2018, Parasites & Vectors.

Distribution, abundance and condition of invasive Ponto-Caspian gobies Ponticola kessleri (Günther, 1861), Neogobius fluviatilis (Pallas, 1814), and Neogobius melanostomus (Pallas, 1814) in the Sava River basin, Croatia.

I. Jakovlić, N. Šprem, M. Piria, 2015 .

Adhesion and colonization properties of potentially probiotic Bacillus paralicheniformis strain FA6 isolated from grass carp intestine

Fan Xiong, S. Wu, I. Jakovlić, 2019, Fisheries Science.

Life history traits and implications for conservation of rock carp Procypris rabaudi Tchang, an endemic fish in the upper Yangtze River, China

Huanzhang Liu, Jun Wang, I. Jakovlić, 2015, Fisheries Science.

Life History Traits, Elasticity Analyses, and Phenotypic Plasticity of Squaliobarbus curriculus in the Pearl River Estuary, China

I. Jakovlić, Peng Wu, Yong Liu, 2021, Frontiers in Environmental Science.

Inverted base composition skews and discontinuous mitochondrial genome architecture evolution in the Enoplea (Nematoda)

H. Zou, Ming Li, I. Jakovlić, 2022, BMC genomics.