A. Yakhnin

发表

Effects of Mutations in the l-Tryptophan Binding Pocket of the trp RNA-binding Attenuation Protein ofBacillus subtilis *

P. Babitzke, A. Yakhnin, J. Trimble, 2000, The Journal of Biological Chemistry.

trp RNA-Binding Attenuation Protein-5′ Stem-Loop RNA Interaction Is Required for Proper Transcription Attenuation Control of the Bacillus subtilis trpEDCFBAOperon

P. Babitzke, A. Yakhnin, H. Du, 2000, Journal of bacteriology.

Mechanism of NusG‐stimulated pausing, hairpin‐dependent pause site selection and intrinsic termination at overlapping pause and termination sites in the Bacillus subtilis trp leader

P. Babitzke, A. Yakhnin, 2010, Molecular microbiology.

Function of the Bacillus subtilis transcription elongation factor NusG in hairpin-dependent RNA polymerase pausing in the trp leader

P. Babitzke, A. Yakhnin, H. Yakhnin, 2008, Proceedings of the National Academy of Sciences.

A Model for the Origin of Life through Rearrangements among Prebiotic Phosphodiester Polymers

A. Yakhnin, 2013, Origins of Life and Evolution of Biospheres.

NusG Is a Sequence-specific RNA Polymerase Pause Factor That Binds to the Non-template DNA within the Paused Transcription Bubble*

K. Murakami, P. Babitzke, A. Yakhnin, 2016, The Journal of Biological Chemistry.

NusG/Spt5: are there common functions of this ubiquitous transcription elongation factor?

P. Babitzke, A. Yakhnin, 2014, Current opinion in microbiology.

The trp RNA-Binding Attenuation Protein of Bacillus subtilis Regulates Translation of the Tryptophan Transport Gene trpP (yhaG) by Blocking Ribosome Binding

P. Babitzke, A. Yakhnin, H. Yakhnin, 2004, Journal of bacteriology.

Modular Organization of the NusA- and NusG-Stimulated RNA Polymerase Pause Signal That Participates in the Bacillus subtilis trp Operon Attenuation Mechanism

P. Babitzke, A. Yakhnin, Smarajit Mondal, 2017, Journal of bacteriology.

Expression of the Bacillus subtilis trpEDCFBAOperon Is Influenced by Translational Coupling and Rho Termination Factor

J. Babiarz, P. Babitzke, A. Yakhnin, 2001, Journal of bacteriology.

Specificity Determinants for the Pyruvate Dehydrogenase Component Reaction Mapped with Mutated and Prosthetic Group Modified Lipoyl Domains*

M. Zółkiewski, T. Roche, A. Yakhnin, 2000, The Journal of Biological Chemistry.

Requirements for the Adaptor Protein Role of Dihydrolipoyl Acetyltransferase in the Up-regulated Function of the Pyruvate Dehydrogenase Kinase and Pyruvate Dehydrogenase Phosphatase*

T. Roche, A. Yakhnin, D. Yang, 1998, The Journal of Biological Chemistry.

Nascent RNA sequencing identifies a widespread sigma70-dependent pausing regulated by Gre factors in bacteria

M. Kashlev, P. FitzGerald, A. Yakhnin, 2020, Nature Communications.

Transcriptome-Wide Effects of NusA on RNA Polymerase Pausing in Bacillus subtilis

M. Kashlev, P. Babitzke, A. Yakhnin, 2022, Journal of bacteriology.

NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA

M. Kashlev, P. Babitzke, A. Yakhnin, 2021, eLife.

NusG-dependent RNA polymerase pausing is a frequent function of this universally conserved transcription elongation factor

M. Kashlev, P. Babitzke, A. Yakhnin, 2020, Critical reviews in biochemistry and molecular biology.

NusG controls transcription pausing and RNA polymerase translocation throughout the Bacillus subtilis genome

M. Kashlev, C. Mcintosh, P. FitzGerald, 2020, Proceedings of the National Academy of Sciences.

NusG-Dependent RNA Polymerase Pausing and Tylosin-Dependent Ribosome Stalling Are Required for Tylosin Resistance by Inducing 23S rRNA Methylation in Bacillus subtilis

M. Kashlev, P. Babitzke, A. Yakhnin, 2019, mBio.

RNA polymerase pausing regulates translation initiation by providing additional time for TRAP-RNA interaction.

P. Babitzke, A. Yakhnin, H. Yakhnin, 2006, Molecular cell.

A Model for the Origin of Protein Synthesis as Coreplicational Scanning of Nascent RNA

A. Yakhnin, 2007, Origins of Life and Evolution of Biospheres.

Translation Control of trpG from Transcripts Originating from the Folate Operon Promoter of Bacillus subtilis Is Influenced by Translation-Mediated Displacement of Bound TRAP, While Translation Control of Transcripts Originating from a Newly Identified trpG Promoter Is Not

P. Babitzke, A. Yakhnin, Paul Babitzke, 2006, Journal of bacteriology.

Ribosomal protein L10(L12)4 autoregulates expression of the Bacillus subtilis rplJL operon by a transcription attenuation mechanism

P. Babitzke, A. Yakhnin, H. Yakhnin, 2015, Nucleic acids research.

NusA-dependent transcription termination prevents misregulation of global gene expression

I. Albert, A. Sebastian, P. Babitzke, 2016, Nature Microbiology.

CsrA activates flhDC expression by protecting flhDC mRNA from RNase E‐mediated cleavage

Christopher A. Vakulskas, P. Babitzke, T. Romeo, 2013, Molecular microbiology.

NusG is an intrinsic transcription termination factor that stimulates motility and coordinates global gene expression with NusA

M. Kashlev, P. Babitzke, A. Yakhnin, 2020, bioRxiv.

Complex regulation of the global regulatory gene csrA: CsrA‐mediated translational repression, transcription from five promoters by Eσ70 and EσS, and indirect transcriptional activation by CsrA

P. Babitzke, T. Romeo, A. Yakhnin, 2011, Molecular microbiology.

NusA-stimulated RNA polymerase pausing and termination participates in the Bacillus subtilis trp operon attenuation mechanism in vitro

P. Babitzke, A. Yakhnin, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Green fluorescent protein purification by organic extraction.

L. Vinokurov, A. Yakhnin, Y. B. Alakhov, 1998, Protein expression and purification.

Gel mobility shift assays to detect protein-RNA interactions.

P. Babitzke, A. Yakhnin, H. Yakhnin, 2012, Methods in molecular biology.

Role of RNA structure in transcription attenuation in Bacillus subtilis: the trpEDCFBA operon as a model system.

Philip C Bevilacqua, P. Bevilacqua, P. Babitzke, 2003, Methods in enzymology.

Protein kinase C in rod outer segments: effects of phosphorylation of the phosphodiesterase inhibitory subunit.

J. Cunnick, A. Yakhnin, D. Takemoto, 1996, The Biochemical journal.

EGFP as a fusion partner for the expression and organic extraction of small polypeptides.

L. Vinokurov, A. Yakhnin, A. Gorokhovatsky, 2003, Protein expression and purification.

A Model for the Origin of Life through Rearrangements among Prebiotic Phosphodiester Polymers

A. Yakhnin, 2013, Origins of Life and Evolution of Biospheres.

Mechanism of NusG‐stimulated pausing, hairpin‐dependent pause site selection and intrinsic termination at overlapping pause and termination sites in the Bacillus subtilis trp leader

P. Babitzke, A. Yakhnin, 2010, Molecular microbiology.

The trp RNA‐binding attenuation protein (TRAP) of Bacillus subtilis regulates translation initiation of ycbK, a gene encoding a putative efflux protein, by blocking ribosome binding

P. Babitzke, A. Yakhnin, H. Yakhnin, 2006, Molecular microbiology.