Camilo Valdes

发表

Dynamics of Pseudomonas aeruginosa genome evolution

B. Birren, S. Lory, J. Galagan, 2008, Proceedings of the National Academy of Sciences.

Novel Approach for Microbiome Analysis Using Bacterial Replication Rates and Causal Inference with Applications

G. Narasimhan, K. Mathee, Camilo Valdes, 2020, bioRxiv.

Modeling association in microbial communities with clique loglinear models

B. Clarke, A. Dobra, J. Clarke, 2018, The Annals of Applied Statistics.

Ensemble Modeling Approach Targeting Heterogeneous RNA-Seq data: Application to Melanoma Pseudogenes

L. Poliseno, E. Capobianco, Zhijie Jiang, 2017, Scientific Reports.

Methods to detect transcribed pseudogenes: RNA-Seq discovery allows learning through features.

E. Capobianco, Camilo Valdes, 2014, Methods in molecular biology.

Detecting bacterial genomes in a metagenomic sample using NGS reads

B. Clarke, J. Clarke, Camilo Valdes, 2015 .

Microbiome Visualization Microbiome Maps: Hilbert Curve Visualizations of Metagenomic Proﬁles

G. Narasimhan, Camilo Valdes, Hajeong Lee, 2021 .

A novel approach for combining the metagenome, metaresistome, metareplicome and causal inference to determine the microbes and their antibiotic resistance gene repertoire that contribute to dysbiosis

G. Narasimhan, K. Mathee, Camilo Valdes, 2022, Microbial genomics.

Time series modeling of cell cycle exit identifies Brd4 dependent regulation of cerebellar neurogenesis

M. Hatten, C. Chiang, J. Rodríguez-Blanco, 2019, Nature Communications.

Ensemble Modeling Approach Targeting Heterogeneous RNA-Seq data: Application to Melanoma Pseudogenes

L. Poliseno, E. Capobianco, Zhijie Jiang, 2017, Scientific Reports.

Characteristics of cross-hybridization and cross-alignment of expression in pseudo-xenograft samples by RNA-Seq and microarrays

Camilo Valdes, Jennifer Clarke, Nicholas F. Tsinoremas, 2013, Journal of Clinical Bioinformatics.

A Bayes testing approach to metagenomic profiling in bacteria

Adrian Dobra, Bertrand Clarke, Camilo Valdes, 2015 .

Microbiome maps: Hilbert curve visualizations of metagenomic profiles

G. Narasimhan, Camilo Valdes, Hajeong Lee, 2022, bioRxiv.

Large scale microbiome profiling in the cloud

Camilo Valdes, Giri Narasimhan, Vitalii Stebliankin, 2019, Bioinform..

Identification of BRAF 3'UTR Isoforms in Melanoma.

L. Poliseno, Francesco Russo, E. Capobianco, 2015, The Journal of investigative dermatology.

Existing and Potential Statistical and Computational Approaches for the Analysis of 3D CT Images of Plant Roots

Zheng Xu, Jennifer Clarke, Camilo Valdes, 2018 .

Time series modeling of cell cycle exit identifies Brd4 dependent regulation of cerebellar neurogenesis

M. Hatten, C. Chiang, J. Rodríguez-Blanco, 2019, Nature Communications.