Menachem Fromer

发表

A computational framework to empower probabilistic protein design

Menachem Fromer, Chen Yanover, 2008, ISMB.

SPRINT: side-chain prediction inference toolbox for multistate protein design

Amir Harel, Michal Linial, Yair Weiss, 2010, Bioinform..

An LP View of the M-best MAP problem

Amir Globerson, Menachem Fromer, A. Globerson, 2009, NIPS.

Tradeoff Between Stability and Multispecificity in the Design of Promiscuous Proteins

Menachem Fromer, Julia M. Shifman, M. Fromer, 2009, PLoS Comput. Biol..

When Less Is More: Improving Classification of Protein Families with a Minimal Set of Global Features

Michal Linial, Roy Varshavsky, Menachem Fromer, 2007, WABI.

PANDORA: analysis of protein and peptide sets through the hierarchical integration of annotations

Michal Linial, Regev Schweiger, Nadav Rappoport, 2010, Nucleic Acids Res..

A functional hierarchical organization of the protein sequence space

Michal Linial, Menachem Fromer, Noam Kaplan, 2004, BMC Bioinformatics.

ProtoNet 4.0: A hierarchical classification of one million protein sequences

Ori Sasson, Nathan Linial, Elon Portugaly, 2004, Nucleic Acids Res..

Geometric Interpretation of Gene Expression by Sparse Reconstruction of Transcript Profiles

Nathan Linial, Michal Linial, Menachem Fromer, 2011, RECOMB.

Recovering key biological constituents through sparse representation of gene expression

Nathan Linial, Michal Linial, Menachem Fromer, 2011, Bioinform..

zCall: a rare variant caller for array-based genotyping: Genetics and population analysis

Patrick F. Sullivan, Menachem Fromer, Benjamin M. Neale, 2012, Bioinform..

Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space

Elon Portugaly, Michal Linial, Menachem Fromer, 2008, ISMB.

Exposing the co-adaptive potential of protein-protein interfaces through computational sequence design

Michal Linial, Menachem Fromer, 2010, Bioinform..

Dead‐end elimination for multistate protein design

Menachem Fromer, Chen Yanover, Julia M. Shifman, 2007, J. Comput. Chem..

Accurate prediction for atomic‐level protein design and its application in diversifying the near‐optimal sequence space

Menachem Fromer, Chen Yanover, C. Yanover, 2009, Proteins.

Prediction of Low Energy Protein Side Chain Configurations Using Markov Random Fields

Menachem Fromer, Chen Yanover, 2012 .