A. Weimann

发表

De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes

P. B. Pope, A. Mchardy, A. Weimann, 2013, Biotechnology for Biofuels.

Producing polished prokaryotic pangenomes with the Panaroo pipeline

J. Corander, J. Parkhill, S. Bentley, 2020, Genome Biology.

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

Bernard Henrissat, Olivier Lespinet, Alice C McHardy, 2016, Nature Communications.

Inference of phenotype-defining functional modules of protein families for microbial plant biomass degraders

P. B. Pope, A. Mchardy, A. Weimann, 2014, bioRxiv.

Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning‐enabled molecular diagnostics

A. Oliver, Ehsaneddin Asgari, M. Mofrad, 2019, bioRxiv.

Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes

V. Zverlov, W. Schwarz, A. Pühler, 2017, Biotechnology for Biofuels.

Inference of phenotype-defining functional modules of protein families for microbial plant biomass degraders

A. Mchardy, A. Weimann, S. Konietzny, 2014, bioRxiv.

Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning‐enabled molecular diagnostics

A. Oliver, Ehsaneddin Asgari, M. Mofrad, 2020, EMBO molecular medicine.

From genomes to phenotypes: Traitar, the microbial trait analyzer

A. Mchardy, A. Bremges, J. Frank, 2016, bioRxiv.

Phagosomal RNA sensing through TLR8 controls susceptibility to tuberculosis

P. MacAry, M. Hibberd, J. Bryant, 2022, bioRxiv.

Mycobacterium abscessus pathogenesis identified by phenogenomic analyses

Marcin J. Skwark, T. Blundell, J. Parkhill, 2022, Nature Microbiology.

Mutational spectra analysis reveals bacterial niche and transmission routes

Gemma G. R. Murray, T. Blundell, A. P. Pandurangan, 2022, bioRxiv.

Protein antibiotics: mind your language

A. Weimann, Annapaula Correia, 2020, Nature reviews. Microbiology.

From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer

Alice C. McHardy, Andreas Bremges, Aaron Weimann, 2016, mSystems.

Metagenomics and CAZyme Discovery.

Alice C McHardy, Andreas Bremges, Aaron Weimann, 2017, Methods in molecular biology.

Producing polished prokaryotic pangenomes with the Panaroo pipeline

Christopher Beaudoin, Stephen D. Bentley, Julian Parkhill, 2020, Genome Biology.

Using Multidimensional Scaling for Visualizing Similarities of Protein Domains

Thomas Lengauer, Ingolf Sommer, Aaron Weimann, 2009 .

Erratum: Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

Emiel Ver Loren van Themaat, B. Henrissat, A. Mchardy, 2016, Nature Communications.

Stepwise pathogenic evolution of Mycobacterium abscessus

T. Blundell, J. Parkhill, J. Bryant, 2021, Science.

The pathobiology of Mycobacterium abscessus revealed through phenogenomic analysis

Marcin J. Skwark, T. Blundell, J. Parkhill, 2021, bioRxiv.

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

Philipp C. Münch, B. Henrissat, A. Mchardy, 2016, Nature Communications.

Sequence-based modelling of bacterial genomes enables accurate antibiotic resistance prediction

A. Weimann, M. Brbić, R. A. Floto, 2024, bioRxiv.

Distributed under Creative Commons Cc-by 4.0 Seqenv: Linking Sequences to Environments through Text Mining

Lars Juhl Jensen, C. Quince, A. Eiler, 2022 .