A. Ikram

发表

Structure-Function Mutational Analysis and Prediction of the Potential Impact of High Risk Non-Synonymous Single-Nucleotide Polymorphism on Poliovirus 2A Protease Stability Using Comprehensive Informatics Approaches

F. M. Awan, Amna Younus, M. F. Bhatti, 2018, Genes.

Norovirus and rotavirus infections in children less than five years of age hospitalized with acute gastroenteritis in Indonesia

M. Peppelenbosch, C. Donato, A. Ikram, 2019, Archives of Virology.

Genomic surveillance reveals the emergence of SARS-CoV-2 Lineage A from Islamabad Pakistan

S. A. Haider, A. Ikram, N. Badar, 2021, medRxiv.

Model of the adaptive immune response system against HCV infection reveals potential immunomodulatory agents for combination therapy

Ayesha Obaid, Amjad Ali, A. Naz, 2018, Scientific Reports.

MicroRNA pharmacogenomics based integrated model of miR-17-92 cluster in sorafenib resistant HCC cells reveals a strategy to forestall drug resistance

Ayesha Obaid, Amjad Ali, A. Naz, 2017, Scientific Reports.

In Silico Identification and Conservation Analysis of B-cell and T-Cell Epitopes of Hepatitis C Virus 3a Genotype Enveloped Glycoprotein 2 From Pakistan: A Step Towards Heterologous Vaccine Design

A. Ikram, Sadia Anjum, M. Tahir, 2014, Hepatitis monthly.

The emerging role and significance of circular RNAs in viral infections and antiviral immune responses: possible implication as theranostic agents

Ayesha Obaid, Amjad Ali, Burton B. Yang, 2020, RNA biology.

Petri Net-Based Model of Helicobacter pylori Mediated Disruption of Tight Junction Proteins in Stomach Lining during Gastric Carcinoma

Ayesha Obaid, Amjad Ali, A. Naz, 2017, Front. Microbiol..

Human Coronavirus Spike Protein Based Multi-Epitope Vaccine against COVID-19 and Potential Future Zoonotic Coronaviruses by Using Immunoinformatic Approaches

Ayesha Obaid, S. Shamim, A. Naz, 2022, Vaccines.

Exploring NS3/4A, NS5A and NS5B proteins to design conserved subunit multi-epitope vaccine against HCV utilizing immunoinformatics approaches

R. Z. Paracha, Ayesha Obaid, Amjad Ali, 2018, Scientific Reports.

Identification of drug resistance and immune‐driven variations in hepatitis C virus (HCV) NS3/4A, NS5A and NS5B regions reveals a new approach toward personalized medicine

R. Z. Paracha, Ayesha Obaid, Amjad Ali, 2017, Antiviral research.

Phylogenetic and immunoinformatic analysis of VP4, VP7, and NSP4 genes of rotavirus strains circulating in children with acute gastroenteritis in Indonesia

C. Donato, A. Ikram, Q. Pan, 2019, Journal of medical virology.

Integrated analysis to study the interplay between post-translational modifications (PTM) in hepatitis C virus proteins and hepatocellular carcinoma (HCC) development

Ayesha Obaid, A. Naz, F. M. Awan, 2022, Scientific Reports.

Mutation-Structure-Function Relationship Based Integrated Strategy Reveals the Potential Impact of Deleterious Missense Mutations in Autophagy Related Proteins on Hepatocellular Carcinoma (HCC): A Comprehensive Informatics Approach

Ayesha Obaid, F. M. Awan, A. Ikram, 2017, International journal of molecular sciences.

Basal interferon signaling and therapeutic use of interferons in controlling rotavirus infection in human intestinal cells and organoids

M. Peppelenbosch, A. Ikram, Q. Pan, 2018, Scientific Reports.

Immunity against hepatitis E virus infection: Implications for therapy and vaccine development

M. Peppelenbosch, A. Ikram, Q. Pan, 2018, Reviews in medical virology.

Norovirus and rotavirus infections in children less than five years of age hospitalized with acute gastroenteritis in Indonesia

M. Peppelenbosch, C. Donato, A. Ikram, 2019, Archives of Virology.

Genotype-specific acquisition, evolution and adaptation of characteristic mutations in hepatitis E virus

M. Peppelenbosch, Jian-hua Zhou, A. Ikram, 2017, Virulence.

Systems-Level Understanding of Single-Cell Omics

Amjad Ali, Rehan Zafar Paracha, Ayesha Obaid, 2019, Single-Cell Omics.

Brain-protective mechanisms of autophagy associated circRNAs: Kick starting self-cleaning mode in brain cells via circRNAs as a potential therapeutic approach for neurodegenerative diseases

Ayesha Obaid, Burton B. Yang, A. Naz, 2023, Frontiers in Molecular Neuroscience.

MicroRNA pharmacogenomics based integrated model of miR-17-92 cluster in sorafenib resistant HCC cells reveals a strategy to forestall drug resistance

Ayesha Obaid, Amjad Ali, A. Naz, 2017, Scientific Reports.

The Role of miRNAs, circRNAs and Their Interactions in Development and Progression of Hepatocellular Carcinoma: An Insilico Approach

A. Ikram, Badr Alzahrani, Sana Khurshid, 2022, Genes.

Model of the adaptive immune response system against HCV infection reveals potential immunomodulatory agents for combination therapy

Ayesha Obaid, Amjad Ali, A. Naz, 2018, Scientific Reports.

Co-occurrence of heterozygous mutations in COL1A1 and SERPINF1 in a high-risk pregnancy complicated by osteogenesis imperfecta

M. Peppelenbosch, A. Ikram, Zhongren Ma, 2019, Journal of Genetics.

Exploring NS3/4A, NS5A and NS5B proteins to design conserved subunit multi-epitope vaccine against HCV utilizing immunoinformatics approaches

R. Z. Paracha, Ayesha Obaid, Amjad Ali, 2018, Scientific Reports.

Formal Modeling of the Key Determinants of Hepatitis C Virus (HCV) Induced Adaptive Immune Response Network: An Integrative Approach to Map the Cellular and Cytokine-Mediated Host Immune Regulations

Jamil Ahmad, Amjad Ali, Ayesha Obaid, 2018, ICCSA.

Inhibitory Potential of Phytochemicals on Interleukin-6-Mediated T-Cell Reduction in COVID-19 Patients: A Computational Approach

Mubashir Hassan, A. Naz, F. M. Awan, 2021, Bioinformatics and biology insights.

HEV prevalence and potential risk factors in a large multi-ethnic youth cohort in China

A. Ikram, Zhongren Ma, Lijiang Liu, 2021, Virology journal.

Cross-reactivity towards SARS-CoV-2: the potential role of low-pathogenic human coronaviruses

A. Ikram, Zhongren Ma, Q. Pan, 2020, The Lancet Microbe.

The Impact of Mutations on the Pathogenic and Antigenic Activity of SARS-CoV-2 during the First Wave of the COVID-19 Pandemic: A Comprehensive Immunoinformatics Analysis

F. M. Awan, A. Ikram, M. S. Hakim, 2021, Vaccines.

Mapping CircRNA–miRNA–mRNA regulatory axis identifies hsa_circ_0080942 and hsa_circ_0080135 as a potential theranostic agents for SARS-CoV-2 infection

Ayesha Obaid, Burton B. Yang, A. Naz, 2023, PloS one.

The impact of mutations on the structural and functional properties of SARS-CoV-2 proteins: A comprehensive bioinformatics analysis

Ayesha Obaid, A. Naz, F. M. Awan, 2021, bioRxiv.

An In Silico Deep Learning Approach to Multi-Epitope Vaccine Design: A Hepatitis E Virus Case Study

Tahreem Zaheer, A. Ikram, Sidra Rasheed, 2023, Vaccines.

Basal interferon signaling and therapeutic use of interferons in controlling rotavirus infection in human intestinal cells and organoids

M. Peppelenbosch, A. Ikram, Q. Pan, 2018, Scientific Reports.

Does Cross-neutralization of SARS-CoV-2 Only Relate to High Pathogenic Coronaviruses?

A. Ikram, Zhongren Ma, Q. Pan, 2020, Trends in Immunology.