J. Rogers

发表

Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses.

Edward L. Huttlin, Robert A. Grothe, S. Gygi, 2012, Analytical chemistry.

COMPARTMENTATION OF PROTEINS IN THE ENDOMEMBRANE SYSTEM OF PLANT CELLS.

T. Okita, J. Rogers, 1996, Annual review of plant physiology and plant molecular biology.

Functional Roles of the Extracellular Segments of the Sodium Channel α Subunit in Voltage-dependent Gating and Modulation by β1 Subunits*

John C. Rogers, William A. Catterall, W. Catterall, 1999, The Journal of Biological Chemistry.

Functional roles of the extracellular segments of the sodium channel alpha subunit in voltage-dependent gating and modulation by beta1 subunits.

W. Catterall, T. Scheuer, Y. Qu, 1999, The Journal of biological chemistry.

Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry-Based Assays.

Jeffrey R. Whiteaker, Matthew R. Meyer, Stefani N. Thomas, 2016, Clinical chemistry.

Carbonyl-reactive tandem mass tags for the proteome-wide quantification of N-linked glycans.

Bernhard Kuster, Karsten Kuhn, Ryan Bomgarden, 2012, Analytical chemistry.

TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples

Devin K. Schweppe, Edward L. Huttlin, S. Gygi, 2020, Nature Methods.

Modulation of cardiac Na+ channels expressed in a mammalian cell line and in ventricular myocytes by protein kinase C.

W. Catterall, T. Scheuer, Y. Qu, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Phosphorylation of S1505 in the cardiac Na+ channel inactivation gate is required for modulation by protein kinase C

W. Catterall, T. Scheuer, Y. Qu, 1996, The Journal of general physiology.

cAMP-dependent phosphorylation of two sites in the alpha subunit of the cardiac sodium channel.

W. Catterall, J. Rogers, B. Murphy, 1996, The Journal of biological chemistry.

Molecular Markers for Ion Compartmentation in Cells of Higher Plants

T. Flowers, J. Rogers, R. Leach, 1990 .

In Vitro Processing of Aleurain, a Barley Vacuolar Thiol Protease.

T. Baranski, J. Rogers, N. Galvin, 1990, The Plant cell.

Functional analysis of a Golgi-localized Kex2p-like protease in tobacco suspension culture cells.

J. Rogers, L. Jiang, L. Jiang, 1999, The Plant journal : for cell and molecular biology.

Internal Membranes in Maize Aleurone Protein Storage Vacuoles: Beyond Autophagy

J. Rogers, 2011, Plant Cell.

Automating mass spectrometry-based quantitative glycomics using aminoxy tandem mass tag reagents with SimGlycan.

Ningombam Sanjib Meitei, Arun Apte, J. Rogers, 2015, Journal of proteomics.

Comparison of the effects of N6-methyldeoxyadenosine and N5-methyldeoxycytosine on transcription from nuclear gene promoters in barley.

J. Rogers, S. W. Rogers, 1995, The Plant journal : for cell and molecular biology.

Quantitative Proteomics and Phosphoproteomics Support a Role for Mut9-Like Kinases in Multiple Metabolic and Signaling Pathways in Arabidopsis

Matthew R. Meyer, Dmitri A. Nusinow, B. Evans, 2020, bioRxiv.

Definition and functional implications of gibberellin and abscisic acid cis-acting hormone response complexes.

J. Rogers, S. W. Rogers, 1992, The Plant cell.

The cis-Acting Gibberellin Response Complex in High-pl [alpha]-Amylase Gene Promoters (Requirement of a Coupling Element for High-Level Transcription)

J. Rogers, S. W. Rogers, M. Lanahan, 1994, Plant physiology.

cis-acting DNA elements responsive to gibberellin and its antagonist abscisic acid.

K. Skriver, J. Rogers, J. Mundy, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Alpha tonoplast intrinsic protein is specifically associated with vacuole membrane involved in an autophagic process.

J. Rogers, G. Jauh, Y. Moriyasu, 2003, Plant & cell physiology.

Excretion of deoxyribonucleic acid by lymphocytes stimulated with phytohemagglutinin or antigen.

C. Valeri, S. Kornfeld, J. Rogers, 1972, Proceedings of the National Academy of Sciences of the United States of America.

Complexity of the Barley α-Amylase Gene Families: Determination of Gene Numbers for each Family and mRNA Levels for Individual Members

J. Rogers, B. Khursheed, 1990 .

Conserved amino acid sequence domains in alpha-amylases from plants, mammals, and bacteria.

J. Rogers, 1985, Biochemical and biophysical research communications.

Sorting of Lytic Enzymes in the Plant Golgi Apparatus

Liwen Jiang, J. Rogers, 2018 .

Compartmentation of proteins in the protein storage vacuole: A compound organelle in plant cells

Liwen Jiang, J. Rogers, 2001 .

Tonoplast Intrinsic Protein Isoforms as Markers for Vacuolar Functions

T. Phillips, J. Rogers, G. Jauh, 1999, Plant Cell.

Plant Cells Contain Two Functionally Distinct Vacuolar Compartments

C. Stanley, N. Paris, Russell L. Jones, 1996, Cell.

delta-Tonoplast intrinsic protein defines unique plant vacuole functions.

A. Fischer, C. Ryan, J. Rogers, 1998, Proceedings of the National Academy of Sciences of the United States of America.

Dual Labeling Biotin Switch Assay to Reduce Bias Derived From Different Cysteine Subpopulations A Method to Maximize S-Nitrosylation Detection

D. Kass, R. Cole, E. Crowgey, 2015 .

Multivesicular bodies: a mechanism to package lytic and storage functions in one organelle?

Liwen Jiang, J. Rogers, A. Erickson, 2002, Trends in cell biology.

Two barley alpha-amylase gene families are regulated differently in aleurone cells.

J. Rogers, 1985, The Journal of biological chemistry.

Barley alpha-amylase genes. Quantitative comparison of steady-state mRNA levels from individual members of the two different families expressed in aleurone cells.

J. Rogers, B. Khursheed, J. C. Rogers, 1988, The Journal of biological chemistry.

Nucleotide sequence analysis of alpha-amylase and thiol protease genes that are hormonally regulated in barley aleurone cells.

D. Dean, J. Rogers, R. Whittier, 1987, Nucleic acids research.

Integral Membrane Protein Sorting to Vacuoles in Plant Cells: Evidence for Two Pathways

Liwen Jiang, J. Rogers, 1998, The Journal of cell biology.

Development of a Human Cell-Free Expression System to Generate Stable-Isotope-Labeled Protein Standards for Quantitative Mass Spectrometry

Ryan D. Bomgarden, J. Rogers, S. Peterman, 2012 .

The Role of BP-80 and Homologs in Sorting Proteins to Vacuoles

Liwen Jiang, J. Rogers, 1999, Plant Cell.

Sorting of membrane proteins to vacuoles in plant cells

Liwen Jiang, J. Rogers, 1999 .

HRT, a Novel Zinc Finger, Transcriptional Repressor from Barley*

J. Mundy, K. Skriver, J. Rogers, 1998, The Journal of Biological Chemistry.

Fatty acid amide hydrolase inhibitors display broad selectivity and inhibit multiple carboxylesterases as off-targets

J. Brioni, A. Saraf, J. Rogers, 2007, Neuropharmacology.

Biogenesis of the Protein Storage Vacuole Crystalloid

T. Phillips, Liwen Jiang, J. Rogers, 2000, The Journal of cell biology.

Structural Requirements for Ligand Binding by a Probable Plant Vacuolar Sorting Receptor

Xiaofeng Cao, J. Rogers, L. Beevers, 2000, Plant Cell.

Molecular Cloning and Further Characterization of a Probable Plant Vacuolar Sorting Receptor

T. Kirsch, T. Phillips, N. Paris, 1997, Plant physiology.

Purification and initial characterization of a potential plant vacuolar targeting receptor.

T. Kirsch, N. Paris, J. Rogers, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Targeted MultiNotch MS3 Approach for Relative Quantification of N-Glycans Using Multiplexed Carbonyl-Reactive Isobaric Tags.

Lingjun Li, J. Rogers, Xuefei Zhong, 2018, Analytical chemistry.

Efficient removal of detergents from proteins and peptides in a spin column format.

M. Rosenblatt, P. Haney, J. Rogers, 2011, Analytical biochemistry.

Purification, crystallization and preliminary crystallographic studies of the ligand-binding domain of a plant vacuolar sorting receptor.

C. Kang, J. Rogers, S. W. Rogers, 2004, Acta crystallographica. Section D, Biological crystallography.

Selective expression of a probable amylase/protease inhibitor in barley aleurone cells: Comparison to the barley amylase/subtilisin inhibitor

J. Rogers, J. Mundy, 1986, Planta.

A role for caleosin in degradation of oil-body storage lipid during seed germination.

J. Browse, J. Rogers, Marianne Poxleitner, 2006, The Plant journal : for cell and molecular biology.

Aleurain: a barley thiol protease closely related to mammalian cathepsin H.

G. Heck, D. Dean, J. Rogers, 1985, Proceedings of the National Academy of Sciences of the United States of America.

Coordinate increase in major transcripts from the high pI alpha-amylase multigene family in barley aleurone cells stimulated with gibberellic acid.

C. Milliman, J. Rogers, 1984, The Journal of biological chemistry.

Inducible Plant Proteins: ABA- and GA-responsive gene expression

N. Raikhel, K. Skriver, J. Rogers, 1992 .

The protein storage vacuole

P. A. Rea, T. Phillips, M. Maeshima, 2001, The Journal of cell biology.

A unique family of proteins associated with internalized membranes in protein storage vacuoles of the Brassicaceae.

P. Dupree, M. Deery, J. Rogers, 2004, The Plant journal : for cell and molecular biology.

RNA complementary to α-amylase mRNA in barley

J. Rogers, 1988, Plant Molecular Biology.

Structure, Functional Properties and Vacuolar Targeting of the Barley Thiol Protease, Aleurain

J. Rogers, B. Holwerda, 1993 .

Plant RMR proteins: unique vacuolar sorting receptors that couple ligand sorting with membrane internalization

Liwen Jiang, J. Rogers, Hao Wang, 2011, The FEBS journal.

Caleosins: Ca2+-binding proteins associated with lipid bodies

H. Nielsen, J. Rogers, D. Murphy, 2000, Plant Molecular Biology.

Purification and characterization of aleurain : a plant thiol protease functionally homologous to Mammalian cathepsin h.

J. Rogers, B. Holwerda, B. C. Holwerda, 1992, Plant physiology.

Characterization of DNA excreted from phytohemagglutinin-stimulated lymphocytes

J. Rogers, 1976, The Journal of experimental medicine.

TMTpro-18plex: The Expanded and Complete Set of TMTpro Reagents for Sample Multiplexing.

S. Gygi, J. Paulo, T. Roberts, 2021, Journal of proteome research.

Molecular Determinants of High Affinity Binding of α-Scorpion Toxin and Sea Anemone Toxin in the S3-S4 Extracellular Loop in Domain IV of the Na+ Channel α Subunit*

W. Catterall, T. Scheuer, Y. Qu, 1996, The Journal of Biological Chemistry.

Selective Membrane Protein Internalization Accompanies Movement from the Endoplasmic Reticulum to the Protein Storage Vacuole Pathway in Arabidopsis

Liwen Jiang, J. Rogers, M. Oufattole, 2005, The Plant Cell Online.

Breast tumors educate the proteome of stromal tissue in an individualized but coordinated manner

Li Ding, David Fenyö, Jason M Held, 2017, Science Signaling.

Isolation and sequence analysis of a barley alpha-amylase cDNA clone.

C. Milliman, J. Rogers, 1983, The Journal of biological chemistry.

Sample multiplexing for targeted pathway proteomics in aging mice

Devin K Schweppe, Steven P Gygi, Devin K. Schweppe, 2020, Proceedings of the National Academy of Sciences.

A gibberellin response complex in cereal alpha-amylase gene promoters.

J. Rogers, T. Ho, T. Ho, 1992, The Plant cell.

The gibberellin response element: A DNA sequence in cereal a-amylase gene promoters that mediates GA and ABA effects

J. Rogers, J. Mundy, S. W. Rogers, 1992 .

Sorting of proteins to vacuoles in plant cells

J. Neuhaus, J. Rogers, 1998, Plant Molecular Biology.

Proaleurain vacuolar targeting is mediated by short contiguous peptide interactions.

H. Padgett, J. Rogers, B. Holwerda, 1992, The Plant cell.

Barley alpha-amylase genes and the thiol protease gene Aleurain: use of a single poly(A) addition signal associated with a conserved pentanucleotide at the cleavage site.

J. Rogers, B. Khursheed, 1989, Proceedings of the National Academy of Sciences of the United States of America.

Golgi-mediated vacuolar sorting in plant cells: RMR proteins are sorting receptors for the protein aggregation/membrane internalization pathway

J. Rogers, M. Oufattole, Joonho Park, 2007 .

A Kunitz-type cysteine protease inhibitor from cauliflower and Arabidopsis

B. Svensson, J. Rogers, M. Oufattole, 2006 .

Electrophysiological and Biochemical Evidence That DEG/ENaC Cation Channels Are Composed of Nine Subunits*

M. Welsh, P. Snyder, J. Rogers, 1998, The Journal of Biological Chemistry.

Voltage Sensor–Trapping Enhanced Activation of Sodium Channels by β-Scorpion Toxin Bound to the S3–S4 Loop in Domain II

W. Catterall, T. Scheuer, H. Rochat, 1998, Neuron.

Cloning and characterization of a gibberellin-induced RNase expressed in barley aleurone cells.

J. Rogers, S. W. Rogers, 1999, Plant physiology.

The protein storage vacuole: a unique compound organelle

P. A. Rea, T. Phillips, M. Maeshima, 2001 .

TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples

Devin K. Schweppe, Edward L. Huttlin, S. Gygi, 2020, Nature Methods.

Sample Preparation for Mass Spectrometry-Based Proteomics; from Proteomes to Peptides.

Ryan D. Bomgarden, J. Rogers, 2016, Advances in experimental medicine and biology.

Reducing agent-mediated precipitation of high-abundance plasma proteins.

Anita Saraf, Bhawani Singh, P. Jung, 2009, Analytical biochemistry.

Quantitative Proteomics and Phosphoproteomics Support a Role for Mut9-Like Kinases in Multiple Metabolic and Signaling Pathways in Arabidopsis

Dmitri A. Nusinow, B. Evans, T. Kutchan, 2021, Molecular & cellular proteomics : MCP.

TomahaqCompanion: A Tool for the Creation and Analysis of Isobaric Label Based Multiplexed Targeted Assays.

Jae Choi, Devin K Schweppe, Steven P Gygi, 2018, Journal of proteome research.

The importance of DNA methylation for stability of foreign DNA in barley

J. Rogers, S. W. Rogers, 1992, Plant Molecular Biology.

Association of Catsper1 or -2 with Cav3.3 Leads to Suppression of T-type Calcium Channel Activity*

J. Sullivan, J. Brioni, A. Saraf, 2006, Journal of Biological Chemistry.

Localization of Vacuolar Transport Receptors and Cargo Proteins in the Golgi Apparatus of Developing Arabidopsis Embryos

D. Robinson, J. Rogers, S. Hillmer, 2007, Traffic.

Compartmentation of plant cell proteins in separate lytic and protein storage vacuoles

J. Rogers, 1998 .

Proteomic Quantification and Site-Mapping of S-Nitrosylated Proteins Using Isobaric iodoTMT Reagents

Jiankun Cui, Jianlin Cheng, D. Lubahn, 2014, Journal of proteome research.

cAMP-dependent Phosphorylation of Two Sites in the α Subunit of the Cardiac Sodium Channel*

W. Catterall, J. Rogers, B. Murphy, 1996, The Journal of Biological Chemistry.

Trypsin-sensitive proteins associated with the process of unstable DNA release from human lymphocytes.

J. Rogers, R. Kawahara, 1981, Experimental cell research.

Capping of DNA on phytohemagglutinin-stimulated human lymphoblasts.

J. Rogers, J. Kerstiens, 1981, Journal of immunology.

Glucocorticoids inhibit trypsin-induced DNA release from phytohemagglutinin-stimulated blood lymphocytes.

J. Rogers, C. Distelhorst, 1979, Journal of Immunology.

Selective release of excreted DNA sequences from phytohemagglutinin-stimulated human peripheral blood lymphocytes. Effects of trypsin and divalent cations.

J. Rogers, C. Distelhorst, K. Cramer, 1978, The Journal of clinical investigation.

Persistence of cells capable of T-cell growth factor production in long-term human t-lymphoblast cultures.

J. Rogers, R. Kawahara, 1981, Immunological communications.

Identification of an intracellular precursor to DNA excreted by human lymphocytes.

J. Rogers, 1976, Proceedings of the National Academy of Sciences of the United States of America.

Modulation of Cardiac Na+ Channel Expression in Xenopus Oocytes by β1 Subunits (*)

W. Catterall, T. Scheuer, Y. Qu, 1995, The Journal of Biological Chemistry.

Quantitative phosphoproteomic analysis of the STAT3/IL-6/HIF1alpha signaling network: an initial study in GSC11 glioblastoma stem cells.

Howard Colman, Amol Prakash, Michael Greig, 2010, Journal of proteome research.

AminoxyTMT: A novel multi-functional reagent for characterization of protein carbonylation.

T. Griffin, Ryan D. Bomgarden, J. Rogers, 2016, BioTechniques.

Mass spectrometry-based quantitative proteomics for dissecting multiplexed redox cysteine modifications in nitric oxide-protected cardiomyocyte under hypoxia.

K. Khoo, Yi-Yun Chen, Ryan D. Bomgarden, 2014, Antioxidants & redox signaling.

Modulation of cardiac Na+ channel expression in Xenopus oocytes by beta 1 subunits.

W. Catterall, T. Scheuer, Y. Qu, 1995, The Journal of biological chemistry.

Molecular determinants of drug access to the receptor site for antiarrhythmic drugs in the cardiac Na+ channel.

W. Catterall, T. Scheuer, Y. Qu, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Cloning and Characterization of a Gibberellin-Induced RNase Expressed in Barley Aleurone Cells 1

J. Rogers, S. W. Rogers, 1999 .

Purification of a proaleurain maturation protease

J. Rogers, S. W. Rogers, C. Halls, 2005 .

Monoclonal antibodies to barley aleurain and homologs from other plants.

J. Rogers, M. Burks, S. W. Rogers, 1997, The Plant journal : for cell and molecular biology.

Multiple Vacuoles in Plant Cells

J. Rogers, 2008, Plant Physiology.

Quantitative LC-MS/MS Glycomic Analysis of Biological Samples Using AminoxyTMT.

Y. Mechref, Shiyue Zhou, J. Rogers, 2016, Analytical chemistry.

Capillary Electrophoresis-Electrospray Ionization-Mass Spectrometry for Quantitative Analysis of Glycans Labeled with Multiplex Carbonyl-Reactive Tandem Mass Tags.

Lingjun Li, J. Rogers, Zhengwei Chen, 2015, Analytical chemistry.

Evaluation of Advanced Precursor Determination for Tandem Mass Tag (TMT)-Based Quantitative Proteomics across Instrument Platforms.

S. Carr, Susan Klaeger, K. Clauser, 2018, Journal of Proteome Research.

Kinase Inhibitor Profi ling of TrkA-and TrkB-Expressing Neuroblastoma Cell Lines Using Desthiobiotin Nucleotide Probes

M. Rosenblatt, Ryan D. Bomgarden, R. Viner, 2011 .

Discovery, identification, and characterization of candidate pharmacodynamic markers of methionine aminopeptidase-2 inhibition.

S. Davidsen, P. Richardson, Qian Zhang, 2008, Journal of proteome research.