P. Souda

发表

Deconvolution and Database Search of Complex Tandem Mass Spectra of Intact Proteins

P. Pevzner, V. Bafna, P. Dorrestein, 2010, Molecular & Cellular Proteomics.

Protein-Sequence Polymorphisms and Post-translational Modifications in Proteins from Human Saliva using Top-Down Fourier-transform Ion Cyclotron Resonance Mass Spectrometry.

F. Halgand, D. Wong, J. Whitelegge, 2007, International journal of mass spectrometry.

Sequencing covalent modifications of membrane proteins.

J. Whitelegge, W. Cramer, J. Nishio, 2006, Journal of Experimental Botany.

Profiling of integral membrane proteins and their post translational modifications using high-resolution mass spectrometry.

Puneet Souda, J. Whitelegge, W. Cramer, 2011, Methods.

Confident assignment of intact mass tags to human salivary cystatins using top-down Fourier-transform ion cyclotron resonance mass spectrometry

F. Halgand, D. Wong, J. Whitelegge, 2010, Journal of the American Society for Mass Spectrometry.

Comparative Proteomic Analysis of Differentially Expressed Proteins in the Urine of Reservoir Hosts of Leptospirosis

J. Whitelegge, J. Nally, P. Souda, 2011, PloS one.

Drip, Ship, and Grip, then Slice and Dice: Comprehensive Stroke Center Management of Cervical and Intracranial Emboli

R. Jahan, J. Saver, J. Hinman, 2013, Front. Neurol..

Defining intact protein primary structures from saliva: a step toward the human proteome project.

F. Halgand, D. Wong, J. Whitelegge, 2012, Analytical chemistry.

Mass spectral analysis of the apolipoproteins on dog (Canis lupus familiaris) high density lipoproteins. Detection of apolipoprotein A-II.

F. Halgand, J. Whitelegge, S. Bassilian, 2008, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

Mass spectral analysis of the apolipoproteins on mouse high density lipoproteins. Detection of post-translational modifications.

V. Schumaker, L. Castellani, J. Whitelegge, 2006, Biochimica et biophysica acta.

Micro-heterogeneity of human saliva peptide P-C characterized by high-resolution top-down fourier-transform mass spectrometry

F. Halgand, D. Wong, J. Whitelegge, 2010, Journal of the American Society for Mass Spectrometry.

Detection of two distinct forms of apoC-I in great apes.

X. Xiao, O. Ryder, J. Whitelegge, 2010, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

Remodeling of the plasma membrane in preparation for sperm–egg recognition: roles of acrosomal proteins

R. Aitken, J. Whitelegge, N. Tanphaichitr, 2015, Asian journal of andrology.

Epithelial Junctions Depend on Intercellular Trans-interactions between the Na,K-ATPase β1 Subunits*

G. Sachs, J. Whitelegge, S. Bassilian, 2011, The Journal of Biological Chemistry.

Amide bonds assemble pili on the surface of bacilli

L. Marraffini, J. Whitelegge, O. Schneewind, 2008, Proceedings of the National Academy of Sciences.

Identification of Immunologically Relevant Proteins of Chlamydophila abortus Using Sera from Experimentally Infected Pregnant Ewes

J. Whitelegge, J. Nally, P. Souda, 2010, Clinical and Vaccine Immunology.

Characterization of the Endothelial Cell Cytoskeleton following HLA Class I Ligation

Mary E. Ziegler, E. Reed, J. Whitelegge, 2012, PloS one.

Mass spectral measurements of the apoHDL in horse (Equus caballus) cerebrospinal fluid.

J. Whitelegge, S. Bassilian, P. Souda, 2012, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

Evidence that YycJ is a novel 5'-3' double-stranded DNA exonuclease acting in Bacillus anthracis mismatch repair.

Upendra K. Kar, J. Hoch, Jeffrey H. Miller, 2013, DNA repair.

PYY(1-36) is the major form of PYY in rat distal small intestine: Quantification using high-resolution mass spectrometry

D. Keire, J. Whitelegge, S. Bassilian, 2010, Regulatory Peptides.

Proteomic Characterization of Pig Sperm Anterior Head Plasma Membrane Reveals Roles of Acrosomal Proteins in ZP3 Binding

R. Aitken, J. Whitelegge, N. Tanphaichitr, 2015, Journal of cellular physiology.

Magnetic hydrogel for better adsorption of heavy metals from aqueous solutions

P. Souda, Lisa Sreejith, 2015 .

Environmental sensitive hydrogel for purification of waste water: part 1: synthesis and characterization

P. Souda, Lisa Sreejith, 2014, Polymer Bulletin.

Top-down mass spectrometry of integral membrane proteins

F. Halgand, J. Whitelegge, V. Zabrouskov, 2006, Expert review of proteomics.

mzML—a Community Standard for Mass Spectrometry Data*

Lennart Martens, Henning Hermjakob, Fredrik Levander, 2010, Molecular & Cellular Proteomics.

The minimum information about a proteomics experiment (MIAPE)

Lennart Martens, Chris F. Taylor, John R Yates, 2007, Nature Biotechnology.

Mass spectrometry (LC-MS/MS) identified proteomic biosignatures of breast cancer in proximal fluid.

R. Saxton, Jianbo He, J. Whitelegge, 2012, Journal of proteome research.

Amniotic and allantoic fluids from experimentally infected sheep contain immunoglobulin specific for Chlamydophila abortus.

J. Whitelegge, J. Nally, B. Markey, 2011, Veterinary immunology and immunopathology.

The proteomes of human parotid and submandibular/sublingual gland salivas collected as the ductal secretions.

John R Yates, Tao Xu, Daniel Cociorva, 2008, Journal of proteome research.

A novel EF-hand protein, CRACR2A, is a cytosolic Ca2+ sensor that stabilizes CRAC channels in T cells

Y. Gwack, S. Srikanth, J. Whitelegge, 2010, Nature Cell Biology.

Mass spectral analyses of the two major apolipoproteins of great ape high density lipoproteins.

O. Ryder, J. Whitelegge, S. Bassilian, 2009, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

Molecular Dissection of Novel Trafficking and Processing of the Toxoplasma gondii Rhoptry Metalloprotease Toxolysin‐1

J. Whitelegge, P. Bradley, J. Dubremetz, 2012, Traffic.

Exercise affects energy metabolism and neural plasticity‐related proteins in the hippocampus as revealed by proteomic analysis

F. Gomez-Pinilla, J. Whitelegge, S. Vaynman, 2006, European Journal of Neuroscience.

Combined Phosphoproteomics and Bioinformatics Strategy in Deciphering Drug Resistant Related Pathways in Triple Negative Breast Cancer

J. Whitelegge, P. Souda, Huan-Ming Hsu, 2014, International journal of proteomics.

A Novel 3-Methylhistidine Modification of Yeast Ribosomal Protein Rpl3 Is Dependent upon the YIL110W Methyltransferase*

S. Clarke, J. Whitelegge, Kristofor J. Webb, 2010, The Journal of Biological Chemistry.

A Peroxidase-Dependent Apoplastic Oxidative Burst in Cultured Arabidopsis Cells Functions in MAMP-Elicited Defense1[W][OA]

F. Ausubel, P. Finch, J. Whitelegge, 2012, Plant Physiology.

NdhP and NdhQ: two novel small subunits of the cyanobacterial NDH-1 complex.

J. Whitelegge, W. Cramer, P. Souda, 2011, Biochemistry.

Phenotypic and Genomic Analysis of Hypervirulent Human-associated Bordetella bronchiseptica

J. Parkhill, Jeff F. Miller, S. Tomida, 2012, BMC Microbiology.

The mitochondrial inner membrane protein Mitofilin exists as a complex with SAM50, metaxins 1 and 2, coiled‐coil‐helix coiled‐coil‐helix domain‐containing protein 3 and 6 and DnaJC11

J. Xie, J. Whitelegge, R. Capaldi, 2007, FEBS letters.

D. Borchelt, J. Valentine, J. Whitelegge, 2013, Proceedings of the National Academy of Sciences.

COI1-dependent jasmonate signalling affects growth, metabolite production and cell wall protein composition in arabidopsis

P. Finch, J. Whitelegge, J. O’Brien, 2018, Annals of botany.

Cysteine string protein β is prominently associated with nerve terminals and secretory organelles in mouse brain

J. Whitelegge, S. Kohan, C. Gundersen, 2010, Brain Research.

Impairment of Mitochondria in Adult Mouse Brain Overexpressing Predominantly Full-Length, N-Terminally Acetylated Human α-Synuclein

Upendra K. Kar, G. Mathern, E. Masliah, 2013, PloS one.

Mass spectrometric measurements of the apolipoproteins of bovine (Bos taurus) HDL.

J. Whitelegge, S. Bassilian, C. Nebbia, 2012, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

Quantitative Proteomics Using Formalin-fixed, Paraffin-embedded Biopsy Tissues in Inflammatory Disease

I. Lopez, D. Elashoff, J. Whitelegge, 2019, Journal of proteomics & bioinformatics.

Data‐directed top‐down Fourier‐transform mass spectrometry of a large integral membrane protein complex: Photosystem II from Galdieria sulphuraria

P. Fromme, A. Weber, J. Whitelegge, 2010, Proteomics.

Poly (Acrylate -Acrylic acid-co-Maleic acid) hydrogel: A Cost Effective and Efficient Method for Removal of Metal Ions from Water

P. Souda, Lisa Sreejith, 2013 .

Recruitment of septin cytoskeletal proteins by botulinum toxin A protease determines its remarkable stability

George Sachs, Julian P Whitelegge, Puneet Souda, 2014, Journal of Cell Science.

Post-translational Modifications of Integral Membrane Proteins Resolved by Top-down Fourier Transform Mass Spectrometry with Collisionally Activated Dissociation*

J. Bowie, P. Ping, J. Whitelegge, 2010, Molecular & Cellular Proteomics.

Effect of Aldosterone on Na+ Transport in a Model Renal Epithelial Cell Line

B. Blazer-Yost, F. Witzmann, P. Souda, 2004 .

A Peroxidase-Dependent Apoplastic Oxidative Burst in Cultured Arabidopsis Cells Functions in MAMP-Elicited Defense1[W][OA]

F. Ausubel, P. Finch, P. Souda, 2012, Plant Physiology.

Confident assignment of intact mass tags to human salivary cystatins using top-down Fourier-transform ion cyclotron resonance mass spectrometry

F. Halgand, D. Wong, J. Whitelegge, 2010, Journal of the American Society for Mass Spectrometry.