N. Isabel

发表

Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.

Steven J. M. Jones, Shaun D. Jackman, Benjamin P. Vandervalk, 2015, The Plant journal : for cell and molecular biology.

Traits to stay, traits to move: a review of functional traits to assess sensitivity and adaptive capacity of temperate and boreal trees to climate change

Anthony R. Taylor, C. Messier, J. Kattge, 2016 .

Adaptive genetic variation to drought in a widely distributed conifer suggests a potential for increasing forest resilience in a drying climate.

M. Girardin, J. Bousquet, N. Isabel, 2020, The New phytologist.

Fitness dynamics within a poplar hybrid zone: II. Impact of exotic sex on native poplars in an urban jungle

T. Beardmore, P. Tanguay, Amanda D. Roe, 2014, Ecology and evolution.

Synchronisms between bud and cambium phenology in black spruce: early-flushing provenances exhibit early xylem formation

S. Rossi, N. Isabel, M. Perrin, 2017, Tree physiology.

High-throughput drone based remote sensing reliably tracks phenology in thousands of conifer seedlings.

Christopher Y. S. Wong, P. D’Odorico, I. Ensminger, 2020, The New phytologist.

Changes of carbon and nitrogen metabolites in white spruce (Picea glauca [Moench] Voss) of contrasted growth phenotypes

N. Isabel, Y. Castonguay, C. Dhont, 2011, Trees.

Bud break responds more strongly to daytime than night‐time temperature under asymmetric experimental warming

S. Rossi, N. Isabel, 2017, Global change biology.

Forest genomics: Advancing climate adaptation, forest health, productivity, and conservation

S. Aitken, N. Isabel, J. Holliday, 2019, Evolutionary applications.

The Landscape of Nucleotide Polymorphism among 13,500 Genes of the Conifer Picea glauca, Relationships with Functions, and Comparison with Medicago truncatula

J. MacKay, J. Beaulieu, J. Bousquet, 2013, Genome biology and evolution.

Megagametophyte-derived linkage maps of white spruce (Picea glauca) based on RAPD, SCAR and ESTP markers

J. Bousquet, N. Isabel, Y. Zhou, 2002, Theoretical and Applied Genetics.

History rather than hybridization determines population structure and adaptation in Populus balsamifera

N. Isabel, P. Meirmans, J. Godbout, 2017, Journal of evolutionary biology.

MORE STRONGLY TO DAYTIME THAN NIGHTTIME 1 TEMPERATURE UNDER ASYMMETRIC EXPERIMENTAL WARMING 2 Running head : bud break under asymmetric warming 3

S. Rossi, N. Isabel, 2017 .

Plant Genotype Influences Physicochemical Properties of Substrate as Well as Bacterial and Fungal Assemblages in the Rhizosphere of Balsam Poplar

E. Thiffault, A. Séguin, D. Lachance, 2020, bioRxiv.

RAPDs as an aid to evaluate the genetic integrity of somatic embryogenesis-derived populations of Picea mariana (Mill.) B.S.P.

F. Tremblay, J. Bousquet, N. Isabel, 1993, Theoretical and Applied Genetics.

Coping with environmental constraints: Geographically divergent adaptive evolution and germination plasticity in the transcontinental Populus tremuloides

Isabelle Giguére, B. Boyle, J. Laroche, 2022, PLANTS, PEOPLE, PLANET.

Development of a Traceability System Based on a SNP Array for Large-Scale Production of High-Value White Spruce (Picea glauca)

J. MacKay, A. Rainville, J. Bousquet, 2017, Front. Plant Sci..

Title: Gene copy number variations in adaptive evolution: the genomic distribution of gene CNVs revealed by genetic mapping and their adaptive role in an undomesticated species,

J. MacKay, N. Isabel, J. Prunier, 2020 .

Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce

J. Beaulieu, J. Bousquet, N. Isabel, 2019, Evolutionary applications.

A second-generation diagnostic single nucleotide polymorphism (SNP)-based assay, optimized to distinguish among eight poplar (Populus L.) species and their early hybrids

N. Isabel, M. Lamothe, S. L. Thompson, 2013, Tree Genetics & Genomes.

Somatic Embryogenesis in Red Spruce (Picea Rubens Sarg.)

F. Tremblay, N. Isabel, 1995 .

Complete congruence between gene diversity estimates derived from genotypic data at enzyme and random amplified polymorphic DNA loci in black spruce.

J. Beaulieu, J. Bousquet, N. Isabel, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Phenotypic Correlations Between Juvenile-Mature Wood Density and Growth in Black Spruce

Ahmed Koubaa, S. Zhang, J. Beaulieu, 2007 .

Rates of spontaneous hybridization and hybrid recruitment in co-existing exotic and native mature larch populations

J. Bousquet, N. Isabel, P. Meirmans, 2014, Tree Genetics & Genomes.

OCCURRENCE OF SOMACLONAL VARIATION AMONG SOMATIC EMBRYO-DERIVED WHITE SPRUCES (PICEA GLAUCA, PINACEAE)

F. Tremblay, J. Bousquet, N. Isabel, 1996 .

Tree rings provide a new class of phenotypes for genetic associations that foster insights into adaptation of conifers to climate change

Martin P. Girardin, Isabelle Duchesne, Nathalie Isabel, 2018, The New phytologist.

Combining QTL Mapping and Transcriptomics to Decipher the Genetic Architecture of Phenolic Compounds Metabolism in the Conifer White Spruce

A. Hammerbacher, B. Boyle, J. Laroche, 2021, Frontiers in Plant Science.

Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce

F. Gagnon, J. Bousquet, N. Isabel, 2008, BMC Genomics.

The evolutionary implications of knox-I gene duplications in conifers: correlated evidence from phylogeny, gene mapping, and analysis of functional divergence.

J. Bousquet, N. Isabel, C. Guillet-Claude, 2004, Molecular biology and evolution.

A metapopulation model for the introgression from genetically modified plants into their wild relatives

J. Bousquet, N. Isabel, P. Meirmans, 2008, Evolutionary applications.

Comparative genome mapping among Picea glauca, P. mariana × P. rubens and P. abies, and correspondence with other Pinaceae

S. Jeandroz, J. Bousquet, N. Isabel, 2006, Theoretical and Applied Genetics.

Development of high‐density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners

P. Rigault, F. Gagnon, J. Cooke, 2013, Molecular ecology resources.

A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

Philippe Rigault, Jean Bousquet, Jérôme Laroche, 2012, BMC Biology.

QTL mapping in white spruce: gene maps and genomic regions underlying adaptive traits across pedigrees, years and environments

K. Ritland, J. Bousquet, N. Isabel, 2011, BMC Genomics.

A composite linkage map from two crosses for the species complex Picea mariana × Picea rubens and analysis of synteny with other Pinaceae

J. Bousquet, N. Isabel, S. Beauseigle, 2005, Theoretical and Applied Genetics.

Repeated unidirectional introgression towards Populus balsamifera in contact zones of exotic and native poplars

N. Isabel, P. Périnet, M. Lamothe, 2010, Molecular ecology.

UvA-DARE ( Digital Academic Repository ) Repeated unidirectional introgression towards Populus balsamifera in contact zones of exotic and native

N. Isabel, P. Meirmans, P. Périnet, 2009 .

A set of polymorphic EST‐derived markers for Picea species

N. Isabel, P. Meirmans, M. Lamothe, 2006 .

Genomic Diversity Evaluation of Populus trichocarpa Germplasm for Rare Variant Genetic Association Studies

J. Klápště, N. Isabel, J. Prunier, 2020, Frontiers in Genetics.

A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

P. Rigault, J. Laroche, J. Bousquet, 2012, BMC Biology.

Screening of large numbers of seed families of Pinus strobus L. for somatic embryogenesis from immature and mature zygotic embryos

N. Isabel, E. Garin, A. Plourde, 1998, Plant Cell Reports.

Effect of sugars, amino acids, and culture technique on maturation of somatic embryos of Pinus strobus on medium with two gellan gum concentrations

M. Bernier-Cardou, K. Klimaszewska, N. Isabel, 2000, Plant Cell, Tissue and Organ Culture.

Evidence of Somaclonal Variation in Somatic Embryo-Derived Plantlets of White Spruce (Picea Glauca (Moench) Voss

F. Tremblay, J. Bousquet, N. Isabel, 1995 .

Direct evidence for biased gene diversity estimates from dominant random amplified polymorphic DNA (RAPD) fingerprints

J. Beaulieu, J. Bousquet, N. Isabel, 1999 .

Thermal acclimation of photosynthetic activity and RuBisCO content in two hybrid poplar clones

A. DesRochers, N. Isabel, Lahcen Benomar, 2018, bioRxiv.

Gene copy number variations involved in balsam poplar (Populus balsamifera L.) adaptive variations

R. Guy, Isabelle Giguére, J. MacKay, 2018, Molecular ecology.

Gene copy number variations in adaptive evolution: The genomic distribution of gene copy number variations revealed by genetic mapping and their adaptive role in an undomesticated species, white spruce (Picea glauca)

J. MacKay, J. Bousquet, N. Isabel, 2017, Molecular ecology.

Complete Chloroplast Genome Sequence of a White Spruce (Picea glauca, Genotype WS77111) from Eastern Canada

Steven J. M. Jones, I. Birol, Yongjun Zhao, 2019, Microbiology Resource Announcements.

Salmonid Chromosome Evolution as Revealed by a Novel Method for Comparing RADseq Linkage Maps

L. Bernatchez, C. Audet, É. Normandeau, 2016, bioRxiv.

Novel Method for Comparing RADseq Linkage Maps Reveals Chromosome Evolution in Salmonids

L. Bernatchez, C. Audet, É. Normandeau, 2016 .

A second-generation diagnostic single nucleotide polymorphism (SNP)-based assay, optimized to distinguish among eight poplar (Populus L.) species and their early hybrids

N. Isabel, M. Lamothe, S. L. Thompson, 2013, Tree Genetics & Genomes.

Anthropogenic signature in the incidence and distribution of an emerging pathogen of poplars

R. Hamelin, N. Feau, B. Dhillon, 2016, Biological Invasions.

When exotic poplars and native Populus balsamifera L. meet on the Canadian Prairies: Spontaneous hybridization and establishment of interspecific hybrids

J. Bousquet, N. Isabel, W. Schroeder, 2012 .

An efficient single nucleotide polymorphism assay to diagnose the genomic identity of poplar species and hybrids on the Canadian prairies

N. Isabel, W. Schroeder, S. L. Thompson, 2011 .

Complex patterns of hybridization between exotic and native North American poplar species.

D. Khasa, J. Bousquet, N. Isabel, 2010, American journal of botany.

Species-specific single nucleotide polymorphism markers for detecting hybridization and introgression in poplarThis article is one of a selection of papers published in the Special Issue on Poplar Research in Canada.

N. Isabel, P. Meirmans, P. Périnet, 2007 .

Linkage Maps of the dwarf and Normal Lake Whitefish (Coregonus clupeaformis) Species Complex and Their Hybrids Reveal the Genetic Architecture of Population Divergence

L. Bernatchez, S. Rogers, N. Isabel, 2007, Genetics.

Finding common ground: Toward comparable indicators of adaptive capacity of tree species to a changing climate

I. Aubin, Samuel Royer-Tardif, N. Isabel, 2021, Ecology and evolution.

A high‐resolution reference genetic map positioning 8.8 K genes for the conifer white spruce: structural genomics implications and correspondence with physical distance

I. Birol, J. Bohlmann, F. Gagnon, 2017, The Plant journal : for cell and molecular biology.

ntEdit: scalable genome sequence polishing

René L. Warren, Steven J. M. Jones, Inanc Birol, 2019, bioRxiv.

The heterogeneous levels of linkage disequilibrium in white spruce genes and comparative analysis with other conifers

F. Gagnon, J. Bousquet, N. Isabel, 2011, Heredity.

Annual aboveground carbon uptake enhancements from assisted gene flow in boreal black spruce forests are not long-lasting

M. Girardin, X. Guo, N. Isabel, 2021, Nature Communications.

The timing of bud break in warming conditions: variation among seven sympatric conifer species from Eastern Canada

S. Rossi, N. Isabel, 2017, International Journal of Biometeorology.

Fitness dynamics within a poplar hybrid zone: I. Prezygotic and postzygotic barriers impacting a native poplar hybrid stand

T. Beardmore, P. Tanguay, Amanda D. Roe, 2014, Ecology and evolution.

The genomic architecture and association genetics of adaptive characters using a candidate SNP approach in boreal black spruce

F. Gagnon, J. Beaulieu, J. Bousquet, 2013, BMC Genomics.

Molecular Evolution of Regulatory Genes in Spruces from Different Species and Continents: Heterogeneous Patterns of Linkage Disequilibrium and Selection but Correlated Recent Demographic Changes

J. MacKay, J. Bousquet, N. Isabel, 2010, Journal of Molecular Evolution.

Efficient screening for expressed sequence tag polymorphisms (ESTPs) by DNA pool sequencing and denaturing gradient gel electrophoresis (DGGE) in spruces

J. Bousquet, N. Isabel, Betty Pelgas, 2004, Molecular Breeding.

Contrasting patterns of genetic diversity across the ranges of Pinus monticola and P. strobus: a comparison between eastern and western North American postglacial colonization histories.

N. Isabel, S. Nadeau, K. Ritland, 2015, American journal of botany.

Testing the ‘Hybrid Susceptibility’ and ‘Phenological Sink’ Hypotheses Using the P. balsamifera – P. deltoides Hybrid Zone and Septoria Leaf Spot [Septoria musiva]

B. Thomas, K. Floate, N. Isabel, 2013, PloS one.

Genomic prediction for hastening and improving efficiency of forward selection in conifer polycross mating designs: an example from white spruce

J. Beaulieu, J. Bousquet, N. Isabel, 2020, Heredity.

The challenge of separating signatures of local adaptation from those of isolation by distance and colonization history: The case of two white pines

S. Aitken, N. Isabel, P. Meirmans, 2016, Ecology and evolution.

TRANSITION FROM JUVENILE TO MATURE WOOD IN BLACK SPRUCE (PICEA MARIANA (MILL.) B.S.P.)

Ahmed Koubaa, S. Zhang, J. Beaulieu, 2007 .

Breeding for adaptation to climate change: genomic selection for drought response in a white spruce multi‐site polycross test

J. Beaulieu, J. Bousquet, N. Isabel, 2022, Evolutionary applications.

Connecting tree‐ring phenotypes, genetic associations and transcriptomics to decipher the genomic architecture of drought adaptation in a widespread conifer

M. Girardin, G. Parent, J. MacKay, 2021, Molecular ecology.

Species-diagnostic markers in Larix spp. based on RAPDs and nuclear, cpDNA, and mtDNA gene sequences, and their phylogenetic implications

L. Pâques, J. Bousquet, N. Isabel, 2005, Tree Genetics & Genomes.

How to put forest and conservation genomics into motion for and with Indigenous communities?

N. Isabel, I. Porth, Jean-Michel Beaudoin, 2021, The Forestry Chronicle.

Cross-species amplification of mitochondrial DNA sequence-tagged-site markers in conifers: the nature of polymorphism and variation within and among species in Picea

J. Beaulieu, J. Bousquet, N. Isabel, 2003, Theoretical and Applied Genetics.

Chemotyping and identification of protected Dalbergiatimber using gas chromatography quadrupole time of flight mass spectrometry.

N. Isabel, P. Evans, P. Brunswick, 2019, Journal of chromatography. A.

Strong overestimation of water‐use efficiency responses to rising CO2 in tree‐ring studies

H. Hartmann, Y. Bergeron, M. Girardin, 2020, Global change biology.

Plant-herbivore interactions in a trispecific hybrid swarm of Populus: assessing support for hypotheses of hybrid bridges, evolutionary novelty and genetic similarity.

T. Whitham, K. Floate, N. Isabel, 2016, The New phytologist.

How useful is genomic data for predicting maladaptation to future climate?

M. Whitlock, S. Yeaman, S. Aitken, 2023, bioRxiv.

The genomic architecture and association genetics of adaptive characters using a candidate SNP approach in boreal black spruce

F. Gagnon, J. Beaulieu, J. Bousquet, 2013, BMC Genomics.

Geographic scale and disturbance influence intraspecific trait variability in leaves and roots of North American understorey plants

Anne C. S. McIntosh, F. W. Bell, Jennie R. McLaren, 2019, Functional Ecology.

The impact of reconstructed soils following oil sands exploitation on aspen and its associated belowground microbiome

É. Yergeau, A. Séguin, D. Lachance, 2018, Scientific Reports.

The clonal root system of balsam poplar in upland sites of Quebec and Alberta

F. Tremblay, A. DesRochers, B. Thomas, 2016, Ecology and evolution.

Responses of bud-break phenology to daily-asymmetric warming: daytime warming intensifies the advancement of bud break

Jianguo Huang, Shaokang Zhang, Hai Ren, 2019, International Journal of Biometeorology.

Going with the flow: Intraspecific variation may act as a natural ally to counterbalance the impacts of global change for the riparian species Populus deltoides

N. Isabel, Marie-Claude Gros-Louis, J. Godbout, 2019, Evolutionary applications.

Sequence-tagged-site (STS) markers of arbitrary genes: the amount and nature of variation revealed in Norway spruce

J. Bousquet, N. Isabel, D. J. Perry, 1999, Heredity.

Spruce giga-genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes.

Richard A. Moore, I. Birol, Yongjun Zhao, 2022, The Plant journal : for cell and molecular biology.

Gene mapping in white spruce (P. glauca): QTL and association studies integrating population and expression data

P. Rigault, J. Cooke, J. MacKay, 2011, BMC Proceedings.

A roadmap of apical bud formation in white spruce identifies potential regulators of time to bud set

J. Cooke, N. Isabel, S. Abrams, 2011 .

Responses of bud-break phenology to daily-asymmetric warming: daytime warming intensifies the advancement of bud break

Jianguo Huang, Shaokang Zhang, Hai Ren, 2019, International Journal of Biometeorology.

How useful is genomic data for predicting maladaptation to future climate?

M. Whitlock, S. Yeaman, S. Aitken, 2023, bioRxiv.

Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.

Benjamin P. Vandervalk, I. Birol, Gordon Robertson, 2015, The Plant journal : for cell and molecular biology.

The impact of reconstructed soils following oil sands exploitation on aspen and its associated belowground microbiome

É. Yergeau, A. Séguin, D. Lachance, 2018, Scientific Reports.

COMPARING GC×GC-TOFMS-BASED METABOLOMIC PROFILING AND WOOD ANATOMY FOR FORENSIC IDENTIFICATION OF FIVE MELIACEAE (MAHOGANY) SPECIES

A. Cloutier, N. Isabel, J. Harynuk, 2023, Wood and Fiber Science.

A practical study of CITES wood species identification by untargeted DART/QTOF, GC/QTOF and LC/QTOF together with machine learning processes and statistical analysis

Peter Gasson, Philip D. Evans, Isabelle Duchesne, 2021 .