Mingxiang Teng

发表

Modeling and correct the GC bias of tumor and normal WGS data for SCNA based tumor subclonal population inferring

Yadong Wang, Yan-Shuo Chu, Mingxiang Teng, 2018, BMC Bioinformatics.

Pysubsim-tree: A package for simulating tumor genomes according to tumor evolution history

Yadong Wang, Ling Wang, Yan-Shuo Chu, 2017, 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Editorial: System Biology Methods and Tools for Integrating Omics Data

Mingxiang Teng, Lei Deng, Liang Cheng, 2020, Frontiers in Genetics.

WDNfinder: A method for minimum driver node set detection and analysis in directed and weighted biological network

Yadong Wang, Jie Li, Yan-Shuo Chu, 2017, J. Bioinform. Comput. Biol..

On the widespread and critical impact of systematic bias and batch effects in single-cell RNA-Seq data

Mingxiang Teng, Stephanie C. Hicks, Rafael A Irizarry, 2015 .

A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer

Yadong Wang, Yunlong Liu, Pearlly Yan, 2011, BMC Systems Biology.

regSNPs: a strategy for prioritizing regulatory single nucleotide substitutions

Yadong Wang, Yunlong Liu, Mingxiang Teng, 2012, Bioinform..

rHAT: fast alignment of noisy long reads with regional hashing

Yadong Wang, Mingxiang Teng, Bo Liu, 2016, Bioinform..

Empirical bayes model comparisons for differential methylation analysis

Yadong Wang, Yunlong Liu, Curtis Balch, 2011, GENSiPS.

Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research

Yunlong Liu, Pearlly Yan, Tim Hui-Ming Huang, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine.

Bioinformatics Database Integration Based on Biomedical Ontology

Mingxiang Teng, Liran Juan, Shuang Qiu, 2011 .

2009 Ohio Collaborative Conference on Bioinformatics OCCBIO 2009 Table of Contents

Mingxiang Teng, Weixing Feng, Xu Han, 2009 .

miR2Disease: a manually curated database for microRNA deregulation in human disease

Yadong Wang, Yunlong Liu, Mingxiang Teng, 2008, Nucleic Acids Res..

Simulating genetically heterozygous genomes in the tumour tissue according to its clonal evolution history

Yan-Shuo Chu, Mingxiang Teng, Yadong Wang, 2019, Int. J. Comput. Biol. Drug Des..

DMcompress: Dynamic Markov models for bacterial genome compression

Yadong Wang, Yang Bai, Mingxiang Teng, 2016, 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A practical guide to methods controlling false discoveries in computational biology

Mingxiang Teng, Alejandro Reyes, Ayshwarya Subramanian, 2018, Genome Biology.

The personal genome browser: visualizing functions of genetic variants

Yadong Wang, Jie Li, Mingxiang Teng, 2014, Nucleic Acids Res..

Prioritization of disease microRNAs through a human phenome-microRNAome network

Yadong Wang, Yunlong Liu, Mingxiang Teng, 2010, BMC Systems Biology.

Pre-SCNAClonal: Efficient GC bias correction for SCNA based tumor subclonal populations inferring

Yadong Wang, Yongtian Wang, Yan-Shuo Chu, 2017, 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Family genome browser: visualizing genomes with pedigree information

Yadong Wang, Yongtian Wang, Mingxiang Teng, 2015, Bioinform..

Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-Seq data

Mingxiang Teng, Rafael A. Irizarry, 2016 .

TIMEx: tumor-immune microenvironment deconvolution web-portal for bulk transcriptomics using pan-cancer scRNA-seq signatures

Mingxiang Teng, Kyubum Lee, Christine H. Chung, 2021, Bioinform..

Perspectives on ENCODE

Xintao Wei, Christopher B. Burge, Jason Liu, 2020, Nature.

Erratum: A benchmark for RNA-seq quantification pipelines [Genome Biol. (2016), 17, 74], DOI: 10.1186/s13059-016-0940-1

Xintao Wei, Mingxiang Teng, Rafael A. Irizarry, 2016 .

Prioritizing single-nucleotide variations that potentially regulate alternative splicing

Mingxiang Teng, Guohua Wang, Yunlong Liu, 2011, BMC proceedings.

Empirical Bayes Model Comparisons for Differential Methylation Analysis

Kenneth P. Nephew, Mingxiang Teng, Guohua Wang, 2012, Comparative and functional genomics.

Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-seq data.

Mingxiang Teng, Rafael A Irizarry, 2017, Genome research.

Identification of regulatory regions of bidirectional genes in cervical cancer

Mingxiang Teng, Guohua Wang, Liran Juan, 2013, BMC Medical Genomics.

xIP-seq Platform: An Integrative Framework for High-Throughput Sequencing Data Analysis

Mingxiang Teng, Xin Wang, Guohua Wang, 2009, 2009 Ohio Collaborative Conference on Bioinformatics.

The Influence of cis-Regulatory Elements on DNA Methylation Fidelity

Kenneth P. Nephew, Mingxiang Teng, Lang Li, 2012, PloS one.