D. Rozen

发表

Parallel changes in gene expression after 20,000 generations of evolution in Escherichia coli

R. Lenski, T. Cooper, D. Rozen, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Non-inherited antibiotic resistance

B. Levin, D. Rozen, 2006, Nature Reviews Microbiology.

Heterogeneous Adaptive Trajectories of Small Populations on Complex Fitness Landscapes

Andreas Handel, J. D. de Visser, A. Handel, 2008, PloS one.

cAMP signaling in Dictyostelium. Complexity of cAMP synthesis, degradation and detection.

M. Meima, S. Saran, P. Schaap, 2002, Journal of muscle research and cell motility.

Molecular Phylogeny and Evolution of Morphology in the Social Amoebas

Thomas Winckler, Daniel E Rozen, S. Baldauf, 2006, Science.

Long‐Term Experimental Evolution in Escherichia coli. VIII. Dynamics of a Balanced Polymorphism

Daniel E Rozen, R. Lenski, D. Rozen, 2000, The American Naturalist.

Allele-specific collateral and fitness effects determine the dynamics of fluoroquinolone resistance evolution

D. Rozen, J. V. van Hasselt, A. Liakopoulos, 2020, bioRxiv.

Pherotype Polymorphism in Streptococcus pneumoniae Has No Obvious Effects on Population Structure and Recombination

Omar E. Cornejo, I. Roberts, D. Rozen, 2017, Genome biology and evolution.

Use of Permanent Wall-Deficient Cells as a System for the Discovery of New-to-Nature Metabolites

Güniz Özer Bergman, D. Claessen, A. Kros, 2020, Microorganisms.

Conserved collateral susceptibility networks in diverse clinical strains of Escherichia coli

A. Roberts, J. Kloos, P. Johnsen, 2018, bioRxiv.

Distance-dependent danger responses in bacteria.

G. V. van Wezel, D. Rozen, S. Westhoff, 2017, Current opinion in microbiology.

Fitness effects and transmission of phoretic nematodes of the burying beetle, Nicrophorus vespilloides

D. Rozen, Yin Wang, 2017, bioRxiv.

A Streptococcus pneumoniae infection model in larvae of the wax moth Galleria mellonella

D. Rozen, B. Evans, 2012, European Journal of Clinical Microbiology & Infectious Diseases.

Manganese complex [Mn(CO)3(tpa-κ3N)]Br increases antibiotic sensitivity in multidrug resistant Streptococcus pneumoniae.

R. L. La Ragione, D. Rozen, U. Schatzschneider, 2020, Journal of global antimicrobial resistance.

Wars between microbes on roots and fruits [version 1; peer review: 3 approved]

B. Lugtenberg, D. Rozen, F. Kamilova, 2022 .

The why, what and how of predicting evolution across biology: from disease to biotechnology to biodiversity

Meike T. Wortel, Renske M. A. Vroomans, Michael M. Desai, 2021 .

Chapter Five Evolutionary origins of cAMP signalling in the social amoebas

S. Baldauf, P. Schaap, D. Rozen, 2007 .

Molecular computing: Does DNA compute?

A. Ellington, D. Rozen, S. McGrew, 1996, Current Biology.

Evolving resistance at sub-MIC antibiotics 1 1 2 3 4 The evolution of no-cost resistance at sub-MIC concentrations of 5 streptomycin in Streptomyces coelicolor 6 7 8

D. Rozen, G. P. Wezel, S. Westhoff, 2016 .

Mutational meltdown of putative microbial altruists in Streptomyces coelicolor colonies

D. Claessen, D. Rozen, Shraddha Shitut, 2022, Nature Communications.

Towards evolutionary predictions: Current promises and challenges

Meike T. Wortel, Renske M. A. Vroomans, Michael M. Desai, 2022, Evolutionary applications.

Antimicrobial strategies in burying beetles breeding on carrion

D. Rozen, P. Smiseth, D. Engelmoer, 2008, Proceedings of the National Academy of Sciences.

Antimicrobial secretions and social immunity in larval burying beetles, Nicrophorus vespilloides

A. Arce, D. Rozen, P. Smiseth, 2013, Animal Behaviour.

Mechanisms and fitness effects of antibacterial defences in a carrion beetle

P. Johnston, A. Arce, D. Rozen, 2012, Journal of evolutionary biology.

Egg survival is reduced by grave-soil microbes in the carrion beetle, Nicrophorus vespilloides

A. Vilcinskas, H. Vogel, D. Rozen, 2014, BMC Evolutionary Biology.

Fitness costs of phoretic nematodes in the burying beetle, Nicrophorus vespilloides

D. Rozen, Yin Wang, 2018, Ecology and evolution.

Gut Microbiota Colonization and Transmission in the Burying Beetle Nicrophorus vespilloides throughout Development

D. Rozen, Yin Wang, 2017, Applied and Environmental Microbiology.

Colonization and transmission of the gut microbiota 9 of the burying beetle , Nicrophorus vespilloides , 10 through development 11 12 13

D. Rozen, Yin Wang, 2017 .

Colonization and transmission of the gut microbiota of the burying beetle, Nicrophorus vespolloides, through development

D. Rozen, Yin Wang, 2016, bioRxiv.

Late‐life and intergenerational effects of larval exposure to microbial competitors in the burying beetle Nicrophorus vespilloides

A. Arce, D. Rozen, P. Smiseth, 2014, Journal of evolutionary biology.

Killing as means of promoting biodiversity.

D. Rozen, M. Abrudan, Sarah Brown, 2012, Biochemical Society transactions.

Expression of Streptococcus pneumoniae Bacteriocins Is Induced by Antibiotics via Regulatory Interplay with the Competence System

J. Veening, M. Kjos, I. Roberts, 2016, PLoS pathogens.

Evolutionary origin of cAMP-based chemoattraction in the social amoebae.

S. Baldauf, P. Schaap, D. Rozen, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Conserved collateral antibiotic susceptibility networks in diverse clinical strains of Escherichia coli

A. Roberts, J. Kloos, P. Johnsen, 2018, Nature Communications.

Evolution of genome fragility enables microbial division of labor

Roeland M. H. Merks, Renske M. A. Vroomans, R. Merks, 2021, bioRxiv.

Quantification of Social Behavior in D. discoideum Reveals Complex Fixed and Facultative Strategies

Jason B. Wolf, J. Wolf, D. Rozen, 2009, Current Biology.

Clonal Interference and the Periodic Selection of New Beneficial Mutations in Escherichia coli

J. D. de Visser, D. Rozen, 2006, Genetics.

Generating Heterokaryotic Cells via Bacterial Cell-Cell Fusion

M. Giera, D. Claessen, A. Kros, 2021, bioRxiv.

Fitness Trade-Offs Modify Community Composition Under Contrasting Disturbance Regimes in Pseudomonas fluorescens Microcosms

D. Rozen, D. Engelmoer, 2009, Evolution; international journal of organic evolution.

Significant variation in transformation frequency in Streptococcus pneumoniae

D. Rozen, B. Evans, 2013, The ISME Journal.

Reversible bacteriophage resistance by shedding the bacterial cell wall

Marjolein E. Crooijmans, D. Claessen, A. Briegel, 2021, bioRxiv.

Understanding Microbial Divisions of Labor

D. Claessen, D. Rozen, Zheren Zhang, 2016, Front. Microbiol..

Fitness Trade-offs Result in the Illusion of Social Success

Katie Parkinson, Daniel Rozen, Diogo Melo, 2015, Current Biology.

Bacterial solutions to multicellularity: a tale of biofilms, filaments and fruiting bodies

Dennis Claessen, Lotte Søgaard-Andersen, Oscar P. Kuipers, 2014, Nature Reviews Microbiology.

Limits to adaptation in asexual populations

J. D. de Visser, D. Rozen, 2005, Journal of evolutionary biology.

Mutational meltdown of microbial altruists in Streptomyces coelicolor colonies

D. Claessen, D. Rozen, Shraddha Shitut, 2020, bioRxiv.

Antibiotic production in Streptomyces is organized by a division of labor through terminal genomic differentiation

G. V. van Wezel, D. Claessen, Y. Choi, 2020, Science Advances.

The genetic architecture underlying prey-dependent performance in a microbial predator

J. Wolf, N. Gruenheit, D. Rozen, 2022, Nature Communications.

Socially mediated induction and suppression of antibiosis during bacterial coexistence

G. V. van Wezel, D. Rozen, Fokko Smakman, 2015, Proceedings of the National Academy of Sciences.

The impact of population size on the evolution of asexual microbes on smooth versus rugged fitness landscapes

A. Handel, D. Rozen, 2009, BMC Evolutionary Biology.

Using click chemistry to study microbial ecology and evolution

S. V. van Kasteren, D. Rozen, 2023, ISME Communications.

Next‐generation sequencing as a tool to study microbial evolution

N. Colegrave, M. Brockhurst, D. Rozen, 2011, Molecular ecology.

Long-Term Experimental Evolution in Escherichia coli. XIII. Phylogenetic History of a Balanced Polymorphism

Richard E. Lenski, Dominique Schneider, R. Lenski, 2005, Journal of Molecular Evolution.

Comment on "High Deleterious Genomic Mutation Rate in Stationary Phase of Escherichia coli"

J. D. de Visser, D. Rozen, 2004, Science.

Death and cannibalism in a seasonal environment facilitate bacterial coexistence.

Dominique Schneider, Daniel E Rozen, R. Lenski, 2009, Ecology letters.

The effect of population structure on the adaptive radiation of microbial populations evolving in spatially structured environments.

J. D. de Visser, R. Hoekstra, D. Rozen, 2006, Ecology letters.

Fitness Effects of Fixed Beneficial Mutations in Microbial Populations

P. Gerrish, J. G. D. Visser, D. Rozen, 2002, Current Biology.

Steady at the wheel: conservative sex and the benefits of bacterial transformation

P. Johnsen, D. Rozen, O. Ambur, 2016, bioRxiv.

Conservative Sex and the Benefits of Transformation in Streptococcus pneumoniae

D. Rozen, I. Donaldson, D. Engelmoer, 2013, PLoS pathogens.

The genetic architecture underlying prey-dependent performance in a microbial predator

R. Chisholm, J. Wolf, N. Gruenheit, 2022, Nature Communications.

Fitness Costs of Fluoroquinolone Resistance in Streptococcus pneumoniae

B. Levin, D. Rozen, L. McGee, 2006, Antimicrobial Agents and Chemotherapy.

evolution of clonal suicide : population dynamics and the Streptococcus pneumoniae Oscillations in continuous culture populations of Supplementary data

Omar E. Cornejo, R. May, B. Levin, 2009 .

Oscillations in continuous culture populations of Streptococcus pneumoniae: population dynamics and the evolution of clonal suicide

Omar E. Cornejo, R. May, B. Levin, 2008, Proceedings of the Royal Society B: Biological Sciences.

The evolution of no-cost resistance at sub-MIC concentrations of streptomycin in Streptomyces coelicolor

D. Rozen, G. P. Wezel, S. Westhoff, 2016, The ISME Journal.

Variation in Streptococcus pneumoniae susceptibility to human antimicrobial peptides may mediate intraspecific competition

M. Brockhurst, D. Rozen, M. Habets, 2012, Proceedings of the Royal Society B: Biological Sciences.

Eavesdropping and crosstalk between secreted quorum sensing peptide signals that regulate bacteriocin production in Streptococcus pneumoniae

J. Veening, M. Kjos, I. Roberts, 2016, bioRxiv.

How ticks put the B in blood

D. Rozen, 2018, Journal of Experimental Biology.

Competition Sensing Changes Antibiotic Production in Streptomyces

Alexander M. Kloosterman, G. V. van Wezel, D. Rozen, 2021, mBio.

GENETIC VARIATION FOR ANTIBIOTIC PERSISTENCE IN ESCHERICHIA COLI

D. Rozen, Balint Stewart, 2012, Evolution; international journal of organic evolution.

Design principles of collateral sensitivity-based dosing strategies

P. H. van der Graaf, D. Rozen, J. V. van Hasselt, 2021, Nature Communications.

Spatial structure increases the benefits of antibiotic production in Streptomyces griseus

G. V. van Wezel, D. Rozen, S. Westhoff, 2018, bioRxiv.

Effect of carcass contamination on necrophagous invertebrate performance

Ellard R. Hunting, M. Schrama, D. Rozen, 2021, Ecological Processes.

cAMP signaling in Dictyostelium

M. Meima, S. Saran, P. Schaap, 2004, Journal of Muscle Research & Cell Motility.

Pherotype polymorphism in Streptococcus pneumoniae and its effects on population structure and recombination

Omar E. Cornejo, I. Roberts, D. Rozen, 2016, bioRxiv.

Diverse Ecological Strategies Are Encoded by Streptococcus pneumoniae Bacteriocin-Like Peptides

I. Roberts, D. Rozen, E. Miller, 2016, Genome biology and evolution.

A Streptococcus pneumoniae infection model in larvae of the wax moth Galleria mellonella

D. Rozen, B. Evans, 2012, European Journal of Clinical Microbiology & Infectious Diseases.

Gut microbiota in the burying beetle, Nicrophorus vespilloides, provide colonization resistance against larval bacterial pathogens

D. Rozen, Yin Wang, 2017, bioRxiv.

Ecological drivers of division of labour in Streptomyces.

Matthew F. Traxler, D. Rozen, 2022, Current opinion in microbiology.

Competition sensing alters antibiotic production in Streptomyces

Alexander M. Kloosterman, G. V. van Wezel, D. Rozen, 2020, bioRxiv.

Antibiotic production in Streptomyces is organized by a division of labour through terminal genomic differentiation

Dennis Claessen, Michael Liem, G. V. van Wezel, 2019, bioRxiv.

Wars between microbes on roots and fruits

B. Lugtenberg, D. Rozen, F. Kamilova, 2017, F1000Research.

Conserved collateral antibiotic susceptibility networks in diverse clinical strains of Escherichia coli

A. Roberts, J. Kloos, P. Johnsen, 2018, Nature Communications.

COMPETENCE INCREASES SURVIVAL DURING STRESS IN STREPTOCOCCUS PNEUMONIAE

D. Rozen, D. Engelmoer, Daniel J. P. Engelmoer, 2011, Evolution; international journal of organic evolution.

A RUB-DOWN FOR STRESSED FISH

D. Rozen, 2012, Journal of Experimental Biology.

Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus

D. Claessen, A. Briegel, A. Kropinski, 2022, Scientific Reports.

Manganese complex [Mn(CO)3(tpa-κ3N)]Br increases antibiotic sensitivity in multidrug resistant Streptococcus pneumoniae

R. L. La Ragione, D. Rozen, U. Schatzschneider, 2020, bioRxiv.

Does DNA compute? Molecular computing.

A. Ellington, D. Rozen, S. McGrew, 1996, Current Biology.

PLEIOTROPIC EFFECTS OF BENEFICIAL MUTATIONS IN ESCHERICHIA COLI

E. Ostrowski, D. Rozen, R. Lenski, 2005, Evolution; international journal of organic evolution.

Signal diffusion and the mitigation of social exploitation in pneumococcal competence signalling

D. Rozen, B. Evans, Jungwoo Yang, 2010, Proceedings of the Royal Society B: Biological Sciences.

Supporting Online Material Materials and Methods Figs. S1 to S6 Tables S1 to S4 References and Notes Scaling up Digital Circuit Computation with Dna Strand Displacement Cascades

Lulu Qian, Erik Winfree, M. DePristo, 2022 .

Polymorphic competence peptides do not restrict recombination in Streptococcus pneumoniae.

Omar E. Cornejo, D. Rozen, L. McGee, 2010, Molecular biology and evolution.

Eavesdropping and crosstalk between secreted quorum sensing peptide signals that regulate bacteriocin production in Streptococcus pneumoniae

J. Veening, M. Kjos, I. Roberts, 2018, The ISME Journal.

Bacterial solutions to multicellularity: a tale of biofilms, filaments and fruiting bodies

O. Kuipers, D. Claessen, D. Rozen, 2014, Nature Reviews Microbiology.

Antibiotic production is organized by a division of 5 labour in Streptomyces

D. Claessen, D. Rozen, M. Liem, 2019 .

The impact of population size on the evolution of asexual microbes on smooth versus rugged fitness landscapes

A. Handel, D. Rozen, 2009, BMC Evolutionary Biology.

Spatial structure increases the benefits of antibiotic production in Streptomyces *

G. V. van Wezel, D. Rozen, S. Westhoff, 2019, Evolution; international journal of organic evolution.

Supporting Online Material Materials and Methods Figs. S1 to S6 Tables S1 to S4 References and Notes Scaling up Digital Circuit Computation with Dna Strand Displacement Cascades

Danna R. Gifford, M. DePristo, R. Lenski, 2022 .

Supplementary Online Material: Oscillations in Continuous Culture Populations of Streptococcus pneumoniae: Population Dynamics and the Evolution of Clonal Suicide

Omar E. Cornejo, R. May, B. Levin, 2008 .

SQUIDS IN HEAT

D. Rozen, 2011, Journal of Experimental Biology.