J. Claesen

发表

Computational methods and challenges in hydrogen/deuterium exchange mass spectrometry.

T. Burzykowski, J. Claesen, 2017, Mass spectrometry reviews.

Comparison of the Mahalanobis Distance and Pearson’s χ2 Statistic as Measures of Similarity of Isotope Patterns

T. Burzykowski, D. Valkenborg, J. Claesen, 2014, Journal of The American Society for Mass Spectrometry.

Reply to the Comment on:

T. Burzykowski, P. Dittwald, D. Valkenborg, 2012, Journal of The American Society for Mass Spectrometry.

BRAIN: a universal tool for high-throughput calculations of the isotopic distribution for mass spectrometry.

A. Gambin, T. Burzykowski, P. Dittwald, 2013, Analytical chemistry.

A hidden Markov-model for gene mapping based on whole-genome next generation sequencing data

T. Burzykowski, J. Claesen, 2015, Statistical applications in genetics and molecular biology.

A "Refined Hydrogen Rule" and a "Refined Hydrogen and Halogen Rule" for Organic Molecules.

T. Burzykowski, D. Valkenborg, J. Claesen, 2020, Journal of the American Society for Mass Spectrometry.

Soil microbial community structure and functionality changes in response to long‐term metal and radionuclide pollution

Mohamed Mysara, N. Boon, N. Leys, 2021, Environmental microbiology.

Gene Expression Signature Differentiates Histology But Not Progression Status of Early-Stage NSCLC1

J. Nikliński, W. Niklińska, M. Moniuszko, 2017, Translational oncology.

Made available by Hasselt University Library in https://documentserver.uhasselt.be COMPUTATIONAL METHODS AND CHALLENGES IN HYDROGEN/DEUTERIUM EXCHANGE MASS SPECTROMETRY

J. Claesen, 2022 .

Gene Expression Signature Differentiates Histology But Not Progression Status of Early-Stage NSCLC 1

J. Nikliński, W. Niklińska, M. Moniuszko, 2017 .

Microwave assisted and conventional pyrolysis of MDF – Characterization of the produced biochars

P. Adriaensens, P. Samyn, R. Carleer, 2019, Journal of Analytical and Applied Pyrolysis.

Modeling the positive testing rate of COVID-19 in South Africa using a semi-parametric smoother for binomial data

Rahul Shome, Z. Shkedy, S. Manda, 2020, Frontiers in Public Health.

Copper Resistance Mediates Long-Term Survival of Cupriavidus metallidurans in Wet Contact With Metallic Copper

N. Leys, R. Van Houdt, J. Claesen, 2020, Frontiers in Microbiology.

Fractionated irradiation of MCF7 breast cancer cells rewires a gene regulatory circuit towards a treatment‐resistant stemness phenotype

W. D. De Vos, K. Laukens, R. Quintens, 2022, Molecular oncology.

Statistical models for high-throughput proteomic and genomic data

Jürgen Claesen, J. Claesen, 2013 .

Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis

Lieven Clement, Jürgen Claesen, Johan M Thevelein, 2012, Genome research.

Accurate prediction of metagenome-assembled genome completeness by MAGISTA, a random forest model built on alignment-free intra-bin statistics

P. Vandamme, Mohamed Mysara, N. Leys, 2022, Environmental Microbiome.

Fecal Amino Acid Analysis in Newly Diagnosed Pediatric Inflammatory Bowel Disease: A Multicenter Case-Control Study

M. Benninga, N. D. de Boer, T. D. de Meij, 2021, Inflammatory bowel diseases.

Effects of environmental parameters on Lemna minor growth: An integrated experimental and modelling approach.

J. Vives i Batlle, J. Vangronsveld, N. Horemans, 2021, Journal of environmental management.

The isotope distribution: A rose with thorns.

A. Rockwood, M. Gorshkov, D. Valkenborg, 2023, Mass spectrometry reviews.

De novo prediction of the elemental composition of peptides and proteins based on a single mass.

T. Burzykowski, D. Valkenborg, J. Claesen, 2019, Journal of mass spectrometry : JMS.

Effects of oral contraception with ethinylestradiol and drospirenone on oxidative stress in women 18-35 years old.

J. Foidart, D. de Groote, J. Claesen, 2009, Contraception.

Intestinal mucositis precedes dysbiosis in a mouse model for pelvic irradiation

Mohamed Mysara, S. Baatout, S. Lebeer, 2021, ISME Communications.

Deuteros 2.0: peptide-level significance testing of data from hydrogen deuterium exchange mass spectrometry

Andy M. Lau, Argyris Politis, Kjetil Hansen, 2020, Bioinform..

On the Fine Isotopic Distribution and Limits to Resolution in Mass Spectrometry

A. Rockwood, A. Gambin, P. Dittwald, 2015, Journal of The American Society for Mass Spectrometry.

Predicting the number of sulfur atoms in peptides and small proteins based on the observed aggregated isotope distribution

T. Burzykowski, D. Valkenborg, J. Claesen, 2021, Rapid communications in mass spectrometry : RCM.

An Efficient Method to Calculate the Aggregated Isotopic Distribution and Exact Center-Masses

Piotr Dittwald, Tomasz Burzykowski, Dirk Valkenborg, 2012, Journal of The American Society for Mass Spectrometry.

The Analysis of Peptide-Centric Mass-Spectrometry Data Utilizing Information About the Expected Isotope Distribution

T. Burzykowski, D. Valkenborg, J. Claesen, 2017 .

POPPeT: a New Method to Predict the Protection Factor of Backbone Amide Hydrogens

J. Claesen, Argyris Politis, 2018, Journal of The American Society for Mass Spectrometry.

A Nonhomogeneous Hidden Markov Model for Gene Mapping Based on Next-Generation Sequencing Data

Tomasz Burzykowski, Fatemeh Zamanzad Ghavidel, Jürgen Claesen, 2015, J. Comput. Biol..

A Conceptual Framework for Abundance Estimation of Genomic Targets in the Presence of Ambiguous Short Sequencing Reads

T. Burzykowski, J. Claesen, K. Górczak, 2019, J. Comput. Biol..

A Multivariate Negative-Binomial Model with Random Effects for Differential Gene-Expression Analysis of Correlated mRNA Sequencing Data

D. Plewczyński, T. Burzykowski, J. Claesen, 2019, J. Comput. Biol..

Differences in the Elemental Isotope Definition May Lead to Errors in Modern Mass-Spectrometry-Based Proteomics.

F. Sobott, T. Burzykowski, Frederik Lermyte, 2015, Analytical chemistry.

A varying-coefficient model for the analysis of methylation sequencing data

J. Claesen, K. Górczak, Tomasz Burzykowski, 2024, Comput. Biol. Chem..

MIND: A double-linear model to accurately determine monoisotopic precursor mass in high-resolution top-down proteomics.

K. Laukens, J. Hooyberghs, F. Sobott, 2019, Analytical chemistry.

Experimental Design in Quantitative Proteomics.

Dirk Valkenborg, Jürgen Claesen, Tomasz Burzykowski, 2019, Methods in molecular biology.