D. Salunke

发表

Functional mapping of apidaecin through secondary structure correlation.

R. C. Dutta, S. Nagpal, D. Salunke, 2008, The international journal of biochemistry & cell biology.

Maturation of an antibody response is governed by modulations in flexibility of the antigen-combining site.

K. Rao, D. Salunke, V. Manivel, 2000, Immunity.

Docking, thermodynamics and molecular dynamics (MD) studies of a non-canonical protease inhibitor, MP-4, from Mucuna pruriens

D. Salunke, H. Kaur, D. Nair, 2018, Scientific Reports.

Exploring the different states of wild-type T-cell receptor and mutant conformational changes towards understanding the antigen recognition

S. Tripathi, D. Salunke, 2019, Journal of biomolecular structure & dynamics.

Plasticity within the Antigen-Combining Site May Manifest as Molecular Mimicry in the Humoral Immune Response1

M. Goel, S. Kaur, Lavanya Krishnan, 2004, The Journal of Immunology.

Site-directed mutation affecting polyomavirus capsid self-assembly in vitro

R. Garcea, D. Salunke, D. Caspar, 1987, Nature.

Cloning, expression and efficient refolding of carbohydrate-peptide mimicry recognizing single chain antibody 2D10.

Lavanya Krishnan, D. Salunke, J. Batra, 2010, Protein expression and purification.

Structural Evaluation of a Mimicry-Recognizing Paratope: Plasticity in Antigen–Antibody Interactions Manifests in Molecular Mimicry

D. Salunke, V. Gaur, K. Kaur, 2013, The Journal of Immunology.

Salivary proteome signatures in the early and middle stages of human pregnancy with term birth outcome

N. Tandon, A. Garg, P. Majumder, 2020, Scientific Reports.

Structural transformations in protein crystals caused by controlled dehydration

R. Kodandapani, M. Vijayan, D. Salunke, 1985, Journal of Biosciences.

Design of a functionally equivalent nonglycosylated analog of the glycopeptide antibiotic formaecin I

D. Salunke, K. Kaur, S. Pandey, 2006, Protein science : a publication of the Protein Society.

Deciphering evolution of immune recognition in antibodies

D. Mohanty, D. Salunke, H. Kaur, 2018, BMC Structural Biology.

Structure-guided identification of function: role of Capsicum annuum vicilin during oxidative stress.

D. Salunke, D. Nair, M. Shikhi, 2018, The Biochemical journal.

A Pregnancy Cohort to Study Multidimensional Correlates of Preterm Birth in India: Study Design, Implementation, and Baseline Characteristics of the Participants

P. Majumder, D. Salunke, S. Bhatnagar, 2019, American journal of epidemiology.

Structural Flexibility of Multifunctional HABP1 May Be Important for Regulating Its Binding to Different Ligands*

B. Jha, K. Datta, D. Salunke, 2003, Journal of Biological Chemistry.

Limited conformational flexibility in the paratope may be responsible for degenerate specificity of HIV epitope recognition.

D. Salunke, A. Bhowmick, 2013, International immunology.

Putative Bioactive Motif of Tritrpticin Revealed by an Antibody with Biological Receptor-Like Properties

D. Salunke, S. Lomash, Raghava Sharma, 2013, PloS one.

Studies on glutathione S-transferases important for sperm function: evidence of catalytic activity-independent functions.

S. Totey, D. Salunke, C. Shaha, 1998, The Biochemical journal.

Monoclonal antibodies to gonadotropin-releasing hormone (GnRH) inhibit binding of the hormone to its receptor.

Sunil Gangadharan, A. Karande, S. Nagpal, 2002, Hybridoma and hybridomics.

Sperm plasma-membrane-associated glutathione S-transferases as gamete recognition molecules.

S. Totey, D. Salunke, C. Shaha, 2002, Journal of cell science.

Secretion of glutathione S-transferase isoforms in the seminiferous tubular fluid, tissue distribution and sex steroid binding by rat GSTM1.

D. Salunke, C. Shaha, S. Aravinda, 1999, The Biochemical journal.

Structure–function analyses involving palindromic analogs of tritrypticin suggest autonomy of anti‐endotoxin and antibacterial activities

S. Nagpal, D. Salunke, K. Kaur, 2008, Protein science : a publication of the Protein Society.

Structural and functional studies of differentially O‐glycosylated analogs of a thrombin inhibitory peptide – variegin

D. Salunke, Ashish Kumar, K. Kaur, 2017, Journal of peptide science : an official publication of the European Peptide Society.

Active site geometry of oxalate decarboxylase from Flammulina velutipes: Role of histidine‐coordinated manganese in substrate recognition

D. Jain, S. Chakraborty, A. Datta, 2002, Protein science : a publication of the Protein Society.

X‐ray characterisation of an additional binding site in lysozyme

M. Vijayan, D. Salunke, B. Veerapandian, 1985, FEBS letters.

Mycobacterium tuberculosis secretory proteins CFP‐10, ESAT‐6 and the CFP10:ESAT6 complex inhibit lipopolysaccharide‐induced NF‐κB transactivation by downregulation of reactive oxidative species (ROS) production

P. Sharma, D. Salunke, S. Basu, 2008, Immunology and cell biology.

Crystal structure of nonspecific lipid transfer protein from Solanum melongena

D. Salunke, Abha Jain, 2017, Proteins.

Evidence for clustered mannose as a new ligand for hyaluronan-binding protein (HABP1) from human fibroblasts

K. Datta, D. Salunke, Rajeev Kumar, 2001, Journal of Biosciences.

MP-4 Contributes to Snake Venom Neutralization by Mucuna pruriens Seeds through an Indirect Antibody-mediated Mechanism*

D. Salunke, D. Nair, Ashish Kumar, 2016, The Journal of Biological Chemistry.

Crystallization and preliminary X-ray diffraction analysis of biotin acetyl-CoA carboxylase ligase (BirA) from Mycobacterium tuberculosis.

A. Surolia, A. Tyagi, R. Gupta, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Structural and Functional Consequences of Peptide-Carbohydrate Mimicry

D. Jain, D. Salunke, K. Kaur, 2000, The Journal of Biological Chemistry.

ResponseFacilitates Molecular Mimicry in Antibody Paratope Plasticity in Diverse Modes

Lavanya Krishnan, D. Salunke, S. Lomash, 2007 .

Preparation and preliminary X‐ray studies of three acidic pH crystal forms of the anti‐T lectin from peanut (Arachis hypogaea)

A. Surolia, M. I. Khan, M. Vijayan, 1983 .

Crystallization and preliminary X-ray studies of the anti-T lectin from peanut (Arachis hypogaea).

A. Surolia, M. I. Khan, M. Vijayan, 1982, Journal of molecular biology.

Antibody multispecificity: A necessary evil?

D. Salunke, D. Nair, Deepika Jaiswal, 2022, Molecular Immunology.

High resolution structural and functional analysis of a hemopexin motif protein from Dolichos

D. Salunke, Ashish Kumar, S. Sharma, 2019, Scientific Reports.

Vaginal Microbiome of Pregnant Indian Women: Insights into the Genome of Dominant Lactobacillus Species

A. Garg, P. Majumder, G. Nair, 2020, Microbial Ecology.

Identification and Characterization of EhCaBP2

Alok Bhattacharya, Narendra Padhan, Dinakar M Salunke, 2004, Journal of Biological Chemistry.

Crystal Structure of Bfr A from Mycobacterium tuberculosis: Incorporation of Selenomethionine Results in Cleavage and Demetallation of Haem

A. Tyagi, R. Gupta, D. Salunke, 2009, PloS one.

The structure of MP-4 from Mucuna pruriens at 2.22 Å resolution.

Amit Kumar, D. Salunke, D. Nair, 2020, Acta crystallographica. Section F, Structural biology communications.

Structure of MP-4 from Mucuna pruriens at 2.22 Angstroms

A. Jain, D. Salunke, A. Kumar, 2020 .

Purification, identification and preliminary crystallographic studies of an allergenic protein from Solanum melongena.

D. Salunke, Abha Jain, 2015, Acta Crystallographica Section F Structural Biology Communications.

Crystal structure of the vicilin from Solanum melongena reveals existence of different anionic ligands in structurally similar pockets

Dinakar M. Salunke, Ashish Kumar, D. Salunke, 2016, Scientific Reports.

Crystal Structure and Functional Insights of Hemopexin Fold Protein from Grass Pea1[W][OA]

D. Salunke, I. Qureshi, V. Gaur, 2010, Plant Physiology.

Purification, identification and preliminary crystallographic studies of a 2S albumin seed protein from Lens culinaris.

Pankaj Gupta, D. Salunke, V. Gaur, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Purification, identification and preliminary crystallographic studies of Pru du amandin, an allergenic protein from Prunus dulcis.

Dinakar M Salunke, D. Salunke, D. Sethi, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Purification, identification and preliminary crystallographic studies of an allergenic protein from Lathyrus sativus.

D. Salunke, I. Qureshi, D. Sethi, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Purification, identification and preliminary crystallographic characterization of a novel seed protein from Vigna unguiculata.

D. Salunke, K. Kaur, V. Chanana, 2004, Acta crystallographica. Section D, Biological crystallography.

Polymorphism in the assembly of polyomavirus capsid protein VP1.

R. Garcea, D. Salunke, D. Caspar, 1989, Biophysical journal.

Self-assembly of purified polyomavirus capsid protein VP1

Robert L. Garcea, Dinakar M. Salunke, R. Garcea, 1986, Cell.

Disulfide bond formation through Cys186 facilitates functionally relevant dimerization of trimeric hyaluronan-binding protein 1 (HABP1)/p32/gC1qR.

B. Jha, K. Datta, D. Salunke, 2002, European journal of biochemistry.

Disul ® de bond formation through Cys 186 facilitates functionally relevant dimerization of trimeric hyaluronan-binding protein 1 ( HABP 1 ) / p 32 / gC 1 qR

B. Jha, K. Datta, D. Salunke, 2001 .

Structural insights into the lipid transfer mechanism of a non-specific lipid transfer protein.

S. Tripathi, D. Salunke, Z. K. Madni, 2019, The Plant journal : for cell and molecular biology.

Arrangement of subunits in peanut lectin. Rotation function and chemical cross-linking studies.

A. Surolia, M. I. Khan, M. Vijayan, 1985, The Journal of biological chemistry.

Immunological implications of structural mimicry between a dodecapeptide and a carbohydrate moiety.

D. Jain, M. Goel, D. Salunke, 2001, Vaccine.

Structural basis of functional mimicry between carbohydrate and peptide ligands of con A.

D. Jain, M. Goel, D. Salunke, 2000, Biochemical and biophysical research communications.

Ligand-induced receptor dimerization may be critical for signal transduction by choriogonadotropin.

S. Nagpal, D. Salunke, G. Chavali, 1997, Biophysical journal.

A Testicular Protein Important for Fertility Has Glutathione S-Transferase Activity and Is Localized Extracellularly in the Seminiferous Tubules (*)

C. Dey, S. Totey, D. Salunke, 1995, The Journal of Biological Chemistry.

pH and Cation-induced Thermodynamic Stability of Human Hyaluronan Binding Protein 1 Regulates Its Hyaluronan Affinity*

A. Surolia, B. Jha, R. Rana, 2004, Journal of Biological Chemistry.

Mechanism of specific target recognition and RNA hydrolysis by ribonucleolytic toxin restrictocin.

S. Bagga, D. Salunke, S. Nayak, 2001, Biochemistry.

Plasticity in structure and interactions is critical for the action of indolicidin, an antibacterial peptide of innate immune origin

Deepti Jain, Sushma Nagpal, D. Jain, 2002, Protein science : a publication of the Protein Society.

Helix-loop-helix motif in GnRH associated peptide is critical for negative regulation of prolactin secretion.

S. Nagpal, D. Salunke, G. Chavali, 1997, Journal of molecular biology.

Analysis of sequence signature defining functional specificity and structural stability in helix‐loop‐helix proteins

D. Salunke, C. Vijayalakshmi, G. Chavali, 2001, Proteins.

Antibody specificity and promiscuity.

Dinakar M Salunke, Deepti Jain, D. Jain, 2019, The Biochemical journal.

Antigen exposure leads to rigidification of germline antibody combining site

Dinakar M. Salunke, Jasmita Gill, Praapti Jayaswal, 2014, J. Bioinform. Comput. Biol..

StructuralImmunology:Mechanismsof AntigenRecognition

Lavanya Krishnan, D. Salunke, A. Bhowmick, 2007 .

Differential epitope positioning within the germline antibody paratope enhances promiscuity in the primary immune response.

Dinakar M Salunke, A. Agarwal, D. Salunke, 2006, Immunity.

Precocious ovarian recrudescence and induced off–season spawning of Heteropneustes fossilis by D‐Lys6 salmon gonadotropin releasing hormone analog (sGnRH‐A)

D. Salunke, L. Garg, T. Krishnan, 1994 .

A novel computer modeling approach to the structures of small bioactive peptides: The structure of gonadotropin releasing hormone

D. Salunke, G. P. Talwar, H. Gupta, 1993, Proteins.

Molecular Mimicry Antibody Interactions Manifests in − Antigen Mimicry-Recognizing Paratope : Plasticity in Structural Evaluation of a

D. Salunke, V. Gaur, K. Kaur, 2013 .

Crystal Structure and Functional Insights of Hemopexin Fold Protein from Grass Pea 1(W)(OA)

A. Marg, D. Salunke, I. Qureshi, 2010 .

Antibody promiscuity: Understanding the paradigm shift in antigen recognition

D. Salunke, H. Kaur, 2015, IUBMB life.

Structural Immunology: Mechanisms of Antigen Recognition

Lavanya Krishnan, D. Salunke, A. Bhowmick, 2012 .

Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response

D. Salunke, T. Khan, 2012, The Journal of Immunology.

Response Basis of Degeneracy in the Primary Humoral Structural Elucidation of the Mechanistic

D. Salunke, T. Khan, 2012 .

Epitope Recognition by Diverse Antibodies Suggests Conformational Convergence in an Antibody Response1

B. Nayak, D. Salunke, Kanury Rao, 2002, The Journal of Immunology.

Comparison of first trimester dating methods for gestational age estimation and their implication on preterm birth classification in a North Indian cohort

G. Kang, R. Rengaswamy, A. Garg, 2021, BMC pregnancy and childbirth.

Comparison of first trimester dating methods for gestational age estimation and their implication on preterm birth classification in a North Indian cohort

G. Kang, R. Rengaswamy, A. Garg, 2020, BMC Pregnancy and Childbirth.

Crystal Structure of an Antibody Bound to an Immunodominant Peptide Epitope: Novel Features in Peptide-Antibody Recognition1

D. Salunke, Kanury Rao, D. Nair, 2000, The Journal of Immunology.

Adjustable Locks and Flexible Keys: Plasticity of Epitope–Paratope Interactions in Germline Antibodies

D. Salunke, T. Khan, 2014, The Journal of Immunology.

Structure-Function Analysis of Tritrypticin, an Antibacterial Peptide of Innate Immune Origin*

D. Salunke, K. Kaur, Vibha Gupta, 1999, The Journal of Biological Chemistry.

The variable domain glycosylation in a monoclonal antibody specific to GnRH modulates antigen binding.

D. Salunke, S. Khurana, V. Raghunathan, 1997, Biochemical and biophysical research communications.

Structural mobility and transformations in globular proteins

M. Vijayan, D. Salunke, 1984, Journal of Biosciences.

Antibodies Can Exploit Molecular Crowding to Bind New Antigens at Noncanonical Paratope Positions

Dinakar M. Salunke, D. Salunke, Ashish Kumar, 2016 .

Comparative Structural Proteomics of Allergenic Proteins from Plant Pollen

Alka Dwevedi, D. Salunke, J. Gill, 2014 .

Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.

D. Salunke, Abha Jain, M. Shikhi, 2019, Biochemical and biophysical research communications.

Humoral Immune Response May Manifest as Molecular Mimicry in the Plasticity within the Antigen-Combining Site

M. Goel, S. Kaur, Lavanya Krishnan, 2004 .

Macromolecular structures: Quality assessment and biological interpretation

Dinakar M Salunke, Deepak T Nair, D. Salunke, 2017, IUBMB life.

Analysis of the Quality of Macromolecular Structures

Dinakar M. Salunke, D. Salunke, 2017, bioRxiv.

Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta

G. J. Swaminathan, J. Nagaraju, D. Jain, 2001, The Journal of Biological Chemistry.

Response to Comment on Three X-ray Crystal Structure Papers

D. Salunke, V. Gaur, K. Kaur, 2016, The Journal of Immunology.

An Antibody as Surrogate Receptor Reveals Determinants of Activity of an Innate Immune Peptide Antibiotic*

D. Salunke, S. Lomash, Sushma Nagpal, 2010, The Journal of Biological Chemistry.

Genetic variants associated with spontaneous preterm birth in women from India: a prospective cohort study

A. Garg, P. Majumder, B. Das, 2023, The Lancet regional health. Southeast Asia.

The Primary Antibody Repertoire Represents a Linked Network of Degenerate Antigen Specificities1

Dinakar M. Salunke, D. Salunke, Kanury Rao, 2002, The Journal of Immunology.

Specificities a Linked Network of Degenerate Antigen The Primary Antibody Repertoire Represents

D. Salunke, Kanury Rao, V. Manivel, 2002 .

Liquid-like movements in crystalline insulin

J. Clarage, D. Salunke, D. Caspar, 1988, Nature.

Plasticity in protein-peptide recognition: crystal structures of two different peptides bound to concanavalin A.

D. Jain, D. Salunke, K. Kaur, 2001, Biophysical journal.

Epitope‐directed anti‐SARS‐CoV‐2 scFv engineered against the key spike protein region could block membrane fusion

D. Salunke, V. Gaur, Deepika Jaiswal, 2023, Protein science : a publication of the Protein Society.

Topological Analysis of the Functional Mimicry between a Peptide and a Carbohydrate Moiety*

D. Salunke, K. Kaur, S. Khurana, 1997, The Journal of Biological Chemistry.

Crystallization and molecular packing analysis of barstar crystals.

J. Udgaonkar, D. Salunke, V. Gupta, 1994, Journal of Molecular Biology.

Antibodies against Elapidae and Viperidae snake venoms: in vivo neutralization and mechanistic insights

Amit Kumar, D. Salunke, Shivam Chaturvedi, 2023, bioRxiv.

Docking, thermodynamics and molecular dynamics (MD) studies of a non-canonical protease inhibitor, MP-4, from Mucuna pruriens

D. Salunke, H. Kaur, D. Nair, 2018, Scientific Reports.

Crystal structure of the amino acid-vitamin complex lysine pantothenate

D. Salunke, Mamannamana Vijayan, 1984 .

Role of antibody paratope conformational flexibility in the manifestation of molecular mimicry.

Lavanya Krishnan, D. Salunke, K. Kaur, 2008, Biophysical journal.

Structural Ordering of Disordered Ligand-Binding Loops of Biotin Protein Ligase into Active Conformations as a Consequence of Dehydration

A. Surolia, A. Tyagi, R. Gupta, 2010, PloS one.

Salivary proteome signatures in the early and middle stages of human pregnancy with term birth outcome

N. Tandon, A. Garg, P. Majumder, 2020, Scientific Reports.

Multiple target sites for designing candidate drugs.

D. Salunke, 2018, The Biochemical journal.

A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein

M. S. Rajala, D. Salunke, V. Gaur, 2023, Journal of Biomedical Science.

Mimicry of Native Peptide Antigens by the Corresponding Retro-Inverso Analogs Is Dependent on Their Intrinsic Structure and Interaction Propensities 1

D. Rajagopal, D. Salunke, Kanury Rao, 2003, The Journal of Immunology.

Crystallographic Study of Novel Transthyretin Ligands Exhibiting Negative-Cooperativity between Two Thyroxine Binding Sites

A. Surolia, R. R. Singh, Sarika Gupta, 2012, PloS one.

Porphyrin binding to jacalin is facilitated by the inherent plasticity of the carbohydrate-binding site: novel mode of lectin-ligand interaction.

M. Goel, M. J. Swamy, D. Salunke, 2004, Acta crystallographica. Section D, Biological crystallography.

Functional Equality in the Absence of Structural Similarity

D. Jain, M. Goel, M. J. Swamy, 2001, The Journal of Biological Chemistry.

Enhanced binding of a rationally designed peptide ligand of concanavalin a arises from improved geometrical complementarity.

D. Jain, D. Salunke, K. Kaur, 2001, Biochemistry.

Dynamics of lipid displacement inside the hydrophobic cavity of a nonspecific lipid transfer protein from Solanum melongena

Amit Kumar, D. Salunke, Deepika Jaiswal, 2022, Journal of biomolecular structure & dynamics.

Cloning, expression, purification, crystallization and preliminary X-ray crystallographic analysis of bacterioferritin A from Mycobacterium tuberculosis.

A. Tyagi, R. Gupta, D. Salunke, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Paratope Plasticity in Diverse Modes Facilitates Molecular Mimicry in Antibody Response1

Lavanya Krishnan, D. Salunke, S. Lomash, 2007, The Journal of Immunology.

Structural insight into probable lipid transfer mechanism of non-specific lipid transfer protein via intermediate structures in Solanum melongena

S. Tripathi, D. Salunke, Z. K. Madni, 2019 .

Contributory presentations/posters

Diederichs, Bosco K. Ho, Hironori K. Nakamura, 1999, Journal of Biosciences.

Cross-clade antibody reactivity may attenuate the ability of influenza virus to evade the immune response.

D. Salunke, Sheenam Verma, Sharad Vashisht, 2019, Molecular immunology.

Analysis of sequence signature defining functional specificity and structural stability in helix-loop-helix proteinsG.B. Chavali and C. Vijayalakshmi have contributed equally to the work

D. Salunke, C. Vijayalakshmi, G. Chavali, 2001 .

Limited conformational flexibility in the paratope may be responsible for degenerate specificity of HIV epitope recognition.

D. Salunke, A. Bhowmick, 2013, International immunology.

The structure of a haemopexin-fold protein from cow pea (Vigna unguiculata) suggests functional diversity of haemopexins in plants.

D. Salunke, V. Gaur, Abha Jain, 2011, Acta crystallographica. Section F, Structural biology and crystallization communications.

Features in Peptide-Antibody Recognition Immunodominant Peptide Epitope: Novel Crystal Structure of an Antibody Bound to an

D. Salunke, D. Nair, Kavita . Singh, 2011 .