Shawn Jones

发表

A genomic-library based discovery of a novel, possibly synthetic, acid-tolerance mechanism in Clostridium acetobutylicum involving non-coding RNAs and ribosomal RNA processing.

E. Papoutsakis, J. Borden, Shawn Jones, 2010, Metabolic engineering.

Small RNAs in the Genus Clostridium

E. Papoutsakis, Shawn Jones, D. Indurthi, 2011, mBio.

Parallel labeling experiments validate Clostridium acetobutylicum metabolic network model for (13)C metabolic flux analysis.

Maciek R Antoniewicz, Jungik Choi, M. Antoniewicz, 2014, Metabolic engineering.

Complex and extensive post-transcriptional regulation revealed by integrative proteomic and transcriptomic analysis of metabolite stress response in Clostridium acetobutylicum

Keerthi P. Venkataramanan, E. Terry Papoutsakis, Kelvin H. Lee, 2015, Biotechnology for Biofuels.

Fixation of CO2 and CO on a diverse range of carbohydrates using anaerobic, non-photosynthetic mixotrophy

P. Munasinghe, Bryan P. Tracy, Shawn Jones, 2018, FEMS microbiology letters.

The Clostridium Sporulation Programs: Diversity and Preservation of Endospore Differentiation

E. Papoutsakis, M. Al-Hinai, Shawn Jones, 2015, Microbiology and Molecular Reviews.

Recent advances in single cell protein use as a feed ingredient in aquaculture.

Alon Karpol, Bryan P. Tracy, Shawn Jones, 2020, Current opinion in biotechnology.

Acetogenic mixotrophy: novel options for yield improvement in biofuels and biochemicals production.

A. G. Fast, Bryan P. Tracy, Shawn Jones, 2015, Current opinion in biotechnology.

CO2 fixation by anaerobic non-photosynthetic mixotrophy for improved carbon conversion

Eleftherios T. Papoutsakis, Maciek R. Antoniewicz, E. Papoutsakis, 2016, Nature Communications.

SpoIIE Is Necessary for Asymmetric Division, Sporulation, and Expression of σF, σE, and σG but Does Not Control Solvent Production in Clostridium acetobutylicum ATCC 824

E. Papoutsakis, D. Hess, Bryan P. Tracy, 2011, Journal of bacteriology.

Inactivation of σF in Clostridium acetobutylicum ATCC 824 Blocks Sporulation Prior to Asymmetric Division and Abolishes σE and σG Protein Expression but Does Not Block Solvent Formation

E. Papoutsakis, S. Gaida, Bryan P. Tracy, 2011, Journal of bacteriology.

Clostridia: the importance of their exceptional substrate and metabolite diversity for biofuel and biorefinery applications.

E. Papoutsakis, A. G. Fast, Bryan P. Tracy, 2012, Current opinion in biotechnology.

σK of Clostridium acetobutylicum Is the First Known Sporulation-Specific Sigma Factor with Two Developmentally Separated Roles, One Early and One Late in Sporulation

E. Papoutsakis, M. Al-Hinai, Shawn Jones, 2013, Journal of bacteriology.

The transcriptional program underlying the physiology of clostridial sporulation

E. Papoutsakis, R. Senger, C. Paredes, 2008, Genome Biology.

Sporulation in Separated Roles, One Early and One Late Factor with Two Developmentally First Known Sporulation-Specific Sigma of Clostridium acetobutylicum Is the K σ

M. Al-Hinai, Shawn Jones, T. Eleftherios, 2014 .

Inactivation of σE and σG in Clostridium acetobutylicum Illuminates Their Roles in Clostridial-Cell-Form Biogenesis, Granulose Synthesis, Solventogenesis, and Spore Morphogenesis

Eleftherios T. Papoutsakis, E. Papoutsakis, Bryan P. Tracy, 2011, Journal of bacteriology.

The Clostridium small RNome that responds to stress: the paradigm and importance of toxic metabolite stress in C. acetobutylicum

E. Papoutsakis, B. Meyers, Matthew T. Ralston, 2013, BMC Genomics.

Computational Identification of Small RNAs in Clostridium acetobutylicum and Prediction of mRNA Targets

E. Papoutsakis, Shawn Jones, D. Indurthi, 2008 .

Workflow for quantitative proteomic analysis of Clostridium acetobutylicum ATCC 824 using iTRAQ tags.

Kelvin H. Lee, E. Papoutsakis, L. Choe, 2013, Methods.

Molecular aspects of butanol fermentation.

E. Papoutsakis, J. Borden, R. Senger, 2008 .

Clostridia: the importance of their exceptional substrate and metabolite diversity for biofuel and biorefinery applications.

E. Papoutsakis, Bryan P. Tracy, Shawn Jones, 2012, Current opinion in biotechnology.

Inactivation of σF in Clostridium acetobutylicum ATCC 824 Blocks Sporulation Prior to Asymmetric Division and Abolishes σE and σG Protein Expression but Does Not Block Solvent Formation

E. Papoutsakis, S. Gaida, Bryan P. Tracy, 2011, Journal of bacteriology.

Inactivation of σE and σG in Clostridium acetobutylicum Illuminates Their Roles in Clostridial-Cell-Form Biogenesis, Granulose Synthesis, Solventogenesis, and Spore Morphogenesis

E. Papoutsakis, Bryan P. Tracy, Shawn Jones, 2011, Journal of bacteriology.