Yao-ban Chan

发表

A novel alignment-free method for detection of lateral genetic transfer based on TF-IDF

M. Ragan, Yingnan Cong, Yao-ban Chan, 2016, Scientific Reports.

Using Evidence of Mixed Populations to Select Variables for Clustering Very High-Dimensional Data

P. Hall, Yao-ban Chan, 2010 .

Selected problems in lattice statistical mechanics

Yao-ban Chan, 2005 .

Reconciliation of a gene network and species tree.

C. Robin, Yao-ban Chan, 2019, Journal of theoretical biology.

Exploring lateral genetic transfer among microbial genomes using TF-IDF

Mark A. Ragan, Yao-ban Chan, Yingnan Cong, 2016, Scientific Reports.

The Multilocus Multispecies Coalescent: A Flexible New Model of Gene Family Evolution

Céline Scornavacca, N. Galtier, Qiuyi Li, 2020, bioRxiv.

A scalable method for identifying recombinants from unaligned sequences

K. Tiedje, Heejung Shim, G. Tonkin-Hill, 2020, bioRxiv.

Inferring incomplete lineage sorting, duplications, transfers and losses with reconciliations.

Vincent Ranwez, Céline Scornavacca, Céline Scornavacca, 2017, Journal of theoretical biology.

A Monte Carlo study of non-trapped self-avoiding walks

A. Rechnitzer, Yao-ban Chan, 2012 .

Robust nearest-neighbor methods for classifying high-dimensional data

Yao-ban Chan, Peter Hall, P. Hall, 2009 .

Upper bounds on the growth rates of independent sets in two dimensions via corner transfer matrices

A. Rechnitzer, Yao-ban Chan, 2018, Linear Algebra and its Applications.

Upper Bounds on Two-Dimensional Constraint Capacities via Corner Transfer Matrices

A. Rechnitzer, Yao-ban Chan, 2015 .

Upper bounds on the growth rates of hard squares and related models via corner transfer matrices

A. Rechnitzer, Yao-ban Chan, 2014, 1411.7442.

Accurate lower bounds on two-dimensional constraint capacities from corner transfer matrices

A. Rechnitzer, Yao-ban Chan, 2012, 1210.5189.

Series expansions from the corner transfer matrix renormalization group method: the hard-squares model

Yao-ban Chan, 2011, 1107.1677.

Mean unknotting times of random knots and embeddings

G. Slade, A. Owczarek, A. Rechnitzer, 2007 .

Accurate Lower Bounds on 2-D Constraint Capacities From Corner Transfer Matrices

Andrew Rechnitzer, Yao-Ban Chan, A. Rechnitzer, 2014, IEEE Transactions on Information Theory.

A natural stochastic extension of the sandpile model on a graph

Jean-François Marckert, Yao-ban Chan, Thomas Selig, 2012, J. Comb. Theory, Ser. A.

Reconciliation-based detection of co-evolving gene families

Céline Scornavacca, V. Ranwez, Yao-ban Chan, 2013, BMC Bioinformatics.

Unravelling var complexity: Relationship between DBLα types and var genes in Plasmodium falciparum

Yao-ban Chan, M. H. Tan, K. Day, 2023, Frontiers in Parasitology.

Evolutionary analyses of the major variant surface antigen-encoding genes reveal population structure of Plasmodium falciparum within and between continents

Thomas S. Rask, O. Branch, K. Tiedje, 2021, PLoS genetics.

Alignment-free inference of hierarchical and reticulate phylogenomic relationships

James M. Hogan, Mark A. Ragan, Yao-ban Chan, 2017, Briefings Bioinform..

Robust Inference of Genetic Exchange Communities from Microbial Genomes Using TF-IDF

Michael A. Langston, Mark A. Ragan, Yao-ban Chan, 2017, Front. Microbiol..

An accurate method for identifying recent recombinants from unaligned sequences

K. Tiedje, G. Tonkin-Hill, Qian Feng, 2022, Bioinform..

Series expansions from the corner transfer matrix renormalization group method: II. Asymmetry and high-density hard squares

Yao-ban Chan, 2013 .

The Multilocus Multispecies Coalescent: A Flexible New Model of Gene Family Evolution.

Céline Scornavacca, N. Galtier, Qiuyi Li, 2020, Systematic biology.

Bayesian inference of ancestral recombination graphs

D. Balding, J. Kelleher, Yao-ban Chan, 2022, PLoS Comput. Biol..

Inferring incomplete lineage sorting, duplications, transfers and losses with reconciliations.

Céline Scornavacca, Yao-ban Chan, Vincent Ranwez, 2017, Journal of theoretical biology.