Satra Nim

发表

A systematic approach to identify novel cancer drug targets using machine learning, inhibitor design and high-throughput screening

Philip M. Kim, J. Moffat, J. Wrana, 2014, Genome Medicine.

Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes

Tony Pawson, Roland Arnold, Rakesh Joshi, 2014, Proceedings of the National Academy of Sciences.

Strategies to Develop Inhibitors of Motif-Mediated Protein-Protein Interactions as Drug Leads.

Philip M. Kim, Michael Garton, Carles Corbi-Verge, 2017, Annual review of pharmacology and toxicology.

Method to generate highly stable D-amino acid analogs of bioactive helical peptides using a mirror image of the entire PDB

Philip M. Kim, C. Deber, Michael Garton, 2018, Proceedings of the National Academy of Sciences.

Discovery of short linear motif‐mediated interactions through phage display of intrinsically disordered regions of the human proteome

Norman E. Davey, Philip M. Kim, N. Davey, 2017, The FEBS journal.

Generation and Validation of Intracellular Ubiquitin Variant Inhibitors for USP7 and USP10.

J. Moffat, Taras Makhnevych, S. Sidhu, 2017, Journal of molecular biology.

Rapid and accurate structure‐based therapeutic peptide design using GPU accelerated thermodynamic integration

Philip M. Kim, Michael Garton, N. Tarasova, 2019, Proteins.

PepNN: a deep attention model for the identification of peptide binding sites

Philip M. Kim, Satra Nim, H. Wen, 2022, Communications biology.

Pooled screening for anti-proliferative inhibitors of protein-protein interactions

Philip M. Kim, J. Moffat, Jouhyun Jeon, 2016, Nature chemical biology.

Proangiogenic Effects of Protease-Activated Receptor 2 Are Tumor Necrosis Factor-α and Consecutively Tie2 Dependent

N. Heveker, X. Hou, T. Zhu, 2006, Arteriosclerosis, thrombosis, and vascular biology.

Targeting the Receptor-Binding Motif of SARS-CoV-2 with D-Peptides Mimicking the ACE2 Binding Helix: Lessons for Inhibiting Omicron and Future Variants of Concern

Philip M. Kim, P. A. Valiente, Satra Nim, 2022, J. Chem. Inf. Model..

Subcellular localization of coagulation factor II receptor-like 1 in neurons governs angiogenesis

M. Hollenberg, M. Montoya-Zavala, G. Andelfinger, 2014, Nature Medicine.

Protein engineering by highly parallel screening of computationally designed variants

Philip M. Kim, Carles Corbi-Verge, Philip M Kim, 2016, Science Advances.

Large-Scale Interaction Profiling of Protein Domains Through Proteomic Peptide-Phage Display Using Custom Peptidomes.

Philip M. Kim, Jouhyun Jeon, Satra Nim, 2017, Methods in molecular biology.

A universal deep-learning model for zinc finger design enables transcription factor reprogramming

Philip M. Kim, David M. Ichikawa, T. Hughes, 2023, Nature Biotechnology.

PepNN: a deep attention model for the identification of peptide binding sites

Philip M. Kim, Satra Nim, H. Wen, 2021, Communications Biology.

Alterations of beta-adrenoceptor responsiveness in postischemic myocardium after 72 h of reperfusion.

G. Rousseau, Satra Nim, M. Boucher, 2004, European journal of pharmacology.

Computational Design of Potent D-Peptide Inhibitors of SARS-CoV-2

Philip M. Kim, Y. P. Paudel, Albert Perez-Riba, 2021, Journal of medicinal chemistry.

Apoptosis Detected in the Amygdala Following Myocardial Infarction in the Rat

R. Godbout, G. Rousseau, Satra Nim, 2006, Biological Psychiatry.

Caveolin-1 regulation of dynamin-dependent, raft-mediated endocytosis of cholera toxin–B sub-unit occurs independently of caveolae

J. Dennis, I. Nabi, P. Lajoie, 2009, Journal of cellular and molecular medicine.

Early effects of spinal cord transection on skeletal muscle properties.

G. Rousseau, J. Fowles, Satra Nim, 2006, Applied physiology, nutrition, and metabolism = Physiologie appliquee, nutrition et metabolisme.

Disrupting the α-synuclein-ESCRT interaction with a peptide inhibitor mitigates neurodegeneration in preclinical models of Parkinson’s disease

Philip M. Kim, Suneil K. Kalia, L. Kay, 2023, Nature communications.

Computational Design of Potent and Selective d-Peptide Agonists of the Glucagon-like Peptide-2 Receptor.

Philip M. Kim, P. A. Valiente, Satra Nim, 2023, Journal of medicinal chemistry.