Marja Talikka

发表

Construction of a computable cell proliferation network focused on non-diseased lung cells

Manuel C. Peitsch, Carine Poussin, Julia Hoeng, 2011, BMC Systems Biology.

Systems Toxicology Approach to Unravel Early Indicators of Squamous Cell Carcinoma Rate in Rat Nasal Epithelium Induced by Formaldehyde Exposure

Manuel C. Peitsch, Julia Hoeng, Marja Talikka, 2019, PACBB.

Applying Systems Toxicology Methods to Drug Safety

Manuel C. Peitsch, Julia Hoeng, Marja Talikka, 2019 .

Community-Reviewed Biological Network Models for Toxicology and Drug Discovery Applications

Yang Xiang, Jennifer Park, Manuel C. Peitsch, 2016, Gene regulation and systems biology.

Systems toxicology meta-analysis—From aerosol exposure to nanotoxicology

Manuel C. Peitsch, Julia Hoeng, Marja Talikka, 2019, Current Opinion in Toxicology.

Construction of a Computable Network Model for DNA Damage, Autophagy, Cell Death, and Senescence

Manuel C. Peitsch, Julia Hoeng, Walter K. Schlage, 2013, Bioinformatics and biology insights.

On Crowd-verification of Biological Networks

Raquel Norel, Kahn Rhrissorrakrai, Manuel C. Peitsch, 2013, Bioinformatics and biology insights.

Developing Network-Based Systems Toxicology by Combining Transcriptomics Data with Literature Mining and Multiscale Quantitative Modeling

Julia Hoeng, Marja Talikka, Florian Martin, 2018, Bioinformatics in the Era of Post Genomics and Big Data.

Enhancement of COPD biological networks using a web-based collaboration interface.

Jennifer Park, Julia Hoeng, Marja Talikka, 2015, F1000Research.

Causal biological network database: a comprehensive platform of causal biological network models focused on the pulmonary and vascular systems

Jennifer Park, Manuel C. Peitsch, William Hayes, 2015, Database J. Biol. Databases Curation.

Construction of biological networks from unstructured information based on a semi-automated curation workflow

Juliane Fluck, Manuel C. Peitsch, Martin Hofmann-Apitius, 2015, Database J. Biol. Databases Curation.

Improved Knowledge Acquisition and Creation of Structured Knowledge for Systems Toxicology

Juliane Fluck, Julia Hoeng, Marja Talikka, 2016 .

Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge

Mario Lauria, Preetam Nandy, Erhan Bilal, 2013, Bioinform..

Quantification of biological network perturbations for mechanistic insight and diagnostics using two-layer causal models

Yang Xiang, Manuel C. Peitsch, Julia Hoeng, 2014, BMC Bioinformatics.

Divergence Weighted Independence Graphs for the Exploratory Analysis of Biological Expression Data

Yang Xiang, Manuel C. Peitsch, Joe Whittaker, 2013 .

A Systems-Based Approach to Toxicity Testing

Manuel C. Peitsch, Julia Hoeng, Marja Talikka, 2021 .

Systems Approaches for Toxicological Assessment of Nanomaterials

Manuel C. Peitsch, Julia Hoeng, Marja Talikka, 2021 .

An 8-Month Systems Toxicology Inhalation/Cessation Study in Apoe−/− Mice to Investigate Cardiovascular and Respiratory Exposure Effects of a Candidate Modified Risk Tobacco Product, THS 2.2, Compared With Conventional Cigarettes

Ashraf Elamin, Julia Hoeng, Marja Talikka, 2016, Toxicological sciences : an official journal of the Society of Toxicology.

The Response of Human Nasal and Bronchial Organotypic Tissue Cultures to Repeated Whole Cigarette Smoke Exposure

Marcel Geertz, Julia Hoeng, Carole Mathis, 2014, International journal of toxicology.

In vitro systems toxicology approach to investigate the effects of repeated cigarette smoke exposure on human buccal and gingival organotypic epithelial tissue cultures

Manuel C. Peitsch, Marcel Geertz, Julia Hoeng, 2014, Toxicology mechanisms and methods.

A vascular biology network model focused on inflammatory processes to investigate atherogenesis and plaque instability

Carine Poussin, Julia Hoeng, Stephan Gebel, 2014, Journal of Translational Medicine.

Comprehensive systems biology analysis of a 7-month cigarette smoke inhalation study in C57BL/6 mice

Manuel C. Peitsch, Kim Ekroos, Ashraf Elamin, 2016, Scientific Data.

Impact Assessment of Cigarette Smoke Exposure on Organotypic Bronchial Epithelial Tissue Cultures: A Comparison of Mono-Culture and Coculture Model Containing Fibroblasts

Manuel C. Peitsch, Julia Hoeng, Carole Mathis, 2015, Toxicological sciences : an official journal of the Society of Toxicology.

Classification of lung adenocarcinoma and squamous cell carcinoma samples based on their gene expression profile in the sbv IMPROVER Diagnostic Signature Challenge

Marja Talikka, Stéphanie Boué, Sol Efroni, 2013 .

Systems Approaches Evaluating the Perturbation of Xenobiotic Metabolism in Response to Cigarette Smoke Exposure in Nasal and Bronchial Tissues

Manuel C. Peitsch, Julia Hoeng, Walter K. Schlage, 2013, BioMed research international.

Semi-Automated Curation Allows Causal Network Model Building for the Quantification of Age-Dependent Plaque Progression in ApoE−/− Mouse

Manuel C. Peitsch, Julia Hoeng, Marja Talikka, 2016, Gene regulation and systems biology.

Construction of a Computable Network Model of Tissue Repair and Angiogenesis in the Lung

Manuel C. Peitsch, Julia Hoeng, Walter K. Schlage, 2013 .

Enhancement of COPD biological networks using a web-based collaboration interface

Manuel C. Peitsch, Julia Hoeng, Walter K. Schlage, 2015, F1000Research.

Manuel C. Peitsch, Ashraf Elamin, Julia Hoeng, 2015, Toxicological sciences : an official journal of the Society of Toxicology.

A 7-month cigarette smoke inhalation study in C57BL/6 mice demonstrates reduced lung inflammation and emphysema following smoking cessation or aerosol exposure from a prototypic modified risk tobacco product.

Ashraf Elamin, Julia Hoeng, Marja Talikka, 2015, Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.

A Modular Cell-Type Focused Inflammatory Process Network Model for Non-Diseased Pulmonary Tissue

Manuel C. Peitsch, Julia Hoeng, Walter K. Schlage, 2013, Bioinformatics and biology insights.

Quantitative assessment of biological impact using transcriptomic data and mechanistic network models.

Julia Hoeng, Stephan Gebel, Marja Talikka, 2013, Toxicology and applied pharmacology.

Novel approaches to develop community-built biological network models for potential drug discovery

Martin Hofmann-Apitius, Manuel C. Peitsch, Julia Hoeng, 2017, Expert opinion on drug discovery.

The species translation challenge—A systems biology perspective on human and rat bronchial epithelial cells

Theodore Sakellaropoulos, Leonidas G Alexopoulos, Erhan Bilal, 2014, Scientific Data.

Case study: the role of mechanistic network models in systems toxicology.

Julia Hoeng, Marja Talikka, Manuel C Peitsch, 2014, Drug discovery today.