Z. Du

发表

Microarray Analysis of Temperature‐Induced Transcriptome of Yersinia pestis

Ruifu Yang, Xiuqing Zhang, J. Bao, 2004, Microbiology and immunology.

Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans.

Huanming Yang, Jian Wang, Jun Wang, 2004, DNA research : an international journal for rapid publication of reports on genes and genomes.

Potent Neutralizing Antibodies against SARS-CoV-2 Identified by High-Throughput Single-Cell Sequencing of Convalescent Patients’ B Cells

X. Xie, X. Su, Wenjie Sun, 2020, Cell.

Real-Time Polymerase Chain Reaction for Detecting SARS Coronavirus, Beijing, 2003

Ruifu Yang, G. Palacios, T. Briese, 2004, Emerging infectious diseases.

Identification of Staphylococcus aureus and determination of its methicillin resistance by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Ruifu Yang, Yajun Song, Jin Wang, 2002, Analytical chemistry.

Antibody responses to individual proteins of SARS coronavirus and their neutralization activities

Runsheng Chen, Ruifu Yang, Dongsheng Zhou, 2005, Microbes and Infection.

Quorum sensing affects virulence-associated proteins F1, LcrV, KatY and pH6 etc. of Yersinia pestis as revealed by protein microarray-based antibody profiling

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2006, Microbes and Infection.

Highly Specific and Sensitive Detection of Yersinia pestis by Portable Cas12a-UPTLFA Platform

Ruifu Yang, Yajun Song, Z. Du, 2021, Frontiers in Microbiology.

Cellular fatty acids as chemical markers for differentiation of Yersinia pestis and Yersinia pseudotuberculosis

Z. Du, H. Liu, Y. Li, 2010, Letters in applied microbiology.

Genetics of Metabolic Variations between Yersinia pestis Biovars and the Proposal of a New Biovar, microtus

Ruifu Yang, Z. Tong, Dongsheng Zhou, 2004, Journal of bacteriology.

Construction of a Live-Attenuated Vaccine Strain of Yersinia pestis EV76-B-SHUΔpla and Evaluation of Its Protection Efficacy in a Mouse Model by Aerosolized Intratracheal Inoculation

Lingxia Jiang, Dongsheng Zhou, Z. Du, 2020, Frontiers in Cellular and Infection Microbiology.

Universal Sample Preparation Method for Characterization of Bacteria by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

Ruifu Yang, Jin Wang, Z. Du, 2007, Applied and Environmental Microbiology.

Yersinia pestis-Induced Mitophagy That Balances Mitochondrial Homeostasis and mROS-Mediated Bactericidal Activity

Ruifu Yang, Hongyan Chen, Z. Du, 2022, Microbiology spectrum.

Outer Membrane Proteins Ail and OmpF of Yersinia pestis Are Involved in the Adsorption of T7-Related Bacteriophage Yep-phi

Ruifu Yang, Dongsheng Zhou, Yujun Cui, 2013, Journal of Virology.

Yersinia protein kinase A phosphorylates vasodilator‐stimulated phosphoprotein to modify the host cytoskeleton

Ruifu Yang, Yujun Cui, Yanping Han, 2015, Cellular microbiology.

Reannotation of Yersinia pestis Strain 91001 Based on Omics Data.

Ruifu Yang, Xianwei Yang, Yujun Cui, 2016, The American journal of tropical medicine and hygiene.

Kinetics of Memory B Cell and Plasma Cell Responses in the Mice Immunized with Plague Vaccines

Z. Du, Y. Bi, Y. Song, 2014, Scandinavian journal of immunology.

Pseudogene accumulation might promote the adaptive microevolution of Yersinia pestis.

Huanming Yang, Jun Wang, Ruifu Yang, 2005, Journal of medical microbiology.

Subversion of GBP-mediated host defense by E3 ligases acquired during Yersinia pestis evolution

Ruifu Yang, Yujun Cui, Si Qin, 2022, Nature Communications.

Yersinia pestis YopK Inhibits Bacterial Adhesion to Host Cells by Binding to the Extracellular Matrix Adaptor Protein Matrilin-2

Ruifu Yang, Yanping Han, Yajun Song, 2017, Infection and Immunity.

A live attenuated strain of Yersinia pestis ΔyscB provides protection against bubonic and pneumonic plagues in mouse model.

Ruifu Yang, Z. Du, Xiaoyi Wang, 2013, Vaccine.

Autoregulation of PhoP/PhoQ and Positive Regulation of the Cyclic AMP Receptor Protein-Cyclic AMP Complex by PhoP in Yersinia pestis

Ruifu Yang, Li Wang, Dongsheng Zhou, 2012, Journal of bacteriology.

Use of protein microarray to identify gene expression changes of Yersinia pestis at different temperatures.

Ruifu Yang, Jingyu Guo, Zhaobiao Guo, 2011, Canadian journal of microbiology.

Reduced Apoptosis of Mouse Macrophages Induced by yscW Mutant of Yersinia pestis Results from the Reduced Secretion of YopJ and Relates to Caspase‐3 Signal Pathway

Ruifu Yang, Z. Du, Y. Bi, 2009, Scandinavian journal of immunology.

Transcriptional profiling of a mice plague model: insights into interaction between Yersinia pestis and its host

Ruifu Yang, Jing-fu Qiu, Dongsheng Zhou, 2009, Journal of basic microbiology.

Comparative transcriptome analysis of Yersinia pestis in response to hyperosmotic and high-salinity stress.

Ruifu Yang, J. Bao, Z. Tong, 2005, Research in microbiology.

Development and evaluation of a multiplex droplet digital polymerase chain reaction method for simultaneous detection of five biothreat pathogens

Ruifu Yang, Yipu Du, Yajun Song, 2022, Frontiers in Microbiology.

TyrR, the regulator of aromatic amino acid metabolism, is required for mice infection of Yersinia pestis

Ruifu Yang, Yujun Cui, Yanping Han, 2015, Front. Microbiol..

Fpr2/CXCL1/2 Controls Rapid Neutrophil Infiltration to Inhibit Streptococcus agalactiae Infection

Zi-jiang Guo, Z. Du, Zeyu Sun, 2021, Frontiers in Immunology.

Yersinia pestis and host macrophages: immunodeficiency of mouse macrophages induced by YscW

Ruifu Yang, Yanping Han, Zhaobiao Guo, 2009, Immunology.

Single-cell transcriptomics of immune cells in lymph nodes reveals their composition and alterations in functional dynamics during the early stages of bubonic plague

Hongyan Chen, Ruoyan Li, F. Bai, 2022, Science China Life Sciences.

Activated Macrophage - g Orchestrating IFN-against Pneumonic Plague through IL-17A Produced by Neutrophils Protects

Dongsheng Zhou, Yujun Cui, Yanping Han, 2013 .

Attenuation of Yersinia pestis fyuA Mutants Caused by Iron Uptake Inhibition and Decreased Survivability in Macrophages

Ruifu Yang, Yujun Cui, Yanping Han, 2022, Frontiers in Cellular and Infection Microbiology.

Genome Characterization and Potential Risk Assessment of the Novel SARS-CoV-2 Variant Omicron (B.1.1.529)

Hang Fan, Siqi Sun, Yujun Cui, 2021, Zoonoses.

Curing of four different plasmids in Yersinia pestis using plasmid incompatibility

Z. Du, B. Ni, R. Yang, 2008, Letters in applied microbiology.

Genotyping of hepatitis B virus (HBV) by oligonucleotides microarray.

Ruifu Yang, Yajun Song, Jin Wang, 2006, Molecular and cellular probes.

Proteogenomic discovery of sORF-encoded peptides associated with bacterial virulence in Yersinia pestis

Ruifu Yang, Chen Shao, Chenxi Jia, 2021, Communications Biology.

Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis

Ruifu Yang, D. Falush, Hancheng Zheng, 2012, Proceedings of the National Academy of Sciences.

Defining the genome content of live plague vaccines by use of whole-genome DNA microarray.

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2004, Vaccine.

Enhanced protection against Q fever in BALB/c mice elicited by immunization of chloroform-methanol residue of Coxiella burnetii via intratracheal inoculation.

Dongsheng Zhou, Z. Du, Zhiyu Lu, 2019, Vaccine.

Evolutionary selection of biofilm-mediated extended phenotypes in Yersinia pestis in response to a fluctuating environment

Boris V. Schmid, N. Stenseth, Ruifu Yang, 2020, Nature Communications.

Yersinia pestis and Plague: some knowns and unknowns.

N. Stenseth, B. J. Hinnebusch, V. Motin, 2023, Zoonoses.

Acquisition of Maternal Antibodies both from the Placenta and by Lactation Protects Mouse Offspring from Yersinia pestis Challenge

Ruifu Yang, Dongsheng Zhou, Yujun Cui, 2012, Clinical and Vaccine Immunology.

IL-17A Produced by Neutrophils Protects against Pneumonic Plague through Orchestrating IFN-γ–Activated Macrophage Programming

Ruifu Yang, H. Yang, Dongsheng Zhou, 2014, The Journal of Immunology.

Cellular fatty acids as chemical markers for differentiation of Acinetobacter baumannii and Acinetobacter calcoaceticus.

Gui-qin Wang, Zhaobiao Guo, Z. Du, 2012, Biomedical and environmental sciences : BES.

The Protection Potential of an Alum-Adjuvanted F1 Protein in Dry Powder against Plague in Mice

Ruifu Yang, Yanping Han, Z. Du, 2010 .

Transcriptome analysis of the Mg2+-responsive PhoP regulator in Yersinia pestis.

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2005, FEMS microbiology letters.

Transcriptomic response to Yersinia pestis: RIG-I like receptor signaling response is detrimental to the host against plague.

Ruifu Yang, Yujun Cui, Yanping Han, 2014, Journal of genetics and genomics = Yi chuan xue bao.

This information is current as Programming Activated Macrophage − γ Orchestrating IFN-against Pneumonic Plague through IL-17 A Produced by Neutrophils Protects

Ruifu Yang, Dongsheng Zhou, Yujun Cui, 2013 .

Secretome and Comparative Proteomics of Yersinia pestis Identify Two Novel E3 Ubiquitin Ligases That Contribute to Plague Virulence

Ruifu Yang, Yuling Chen, Yajun Song, 2021, Molecular & cellular proteomics : MCP.

Protein Acetylation Mediated by YfiQ and CobB Is Involved in the Virulence and Stress Response of Yersinia pestis

Ruifu Yang, Yanping Han, Yajun Song, 2018, Infection and Immunity.

Omics strategies for revealing Yersinia pestis virulence

Ruifu Yang, Dongsheng Zhou, Yujun Cui, 2012, Front. Cell. Inf. Microbio..

Cell Membrane Is Impaired, Accompanied by Enhanced Type III Secretion System Expression in Yersinia pestis Deficient in RovA Regulator

Ruifu Yang, H. Ling, Zhaobiao Guo, 2010, PloS one.

Gene expression profiling of Yersinia pestis with deletion of lcrG, a known negative regulator for Yop secretion of type III secretion system.

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2009, International journal of medical microbiology : IJMM.

Characterization of Zur-dependent genes and direct Zur targets in Yersinia pestis

Ruifu Yang, Dongsheng Zhou, He Gao, 2009, BMC Microbiology.

Physiological and regulatory characterization of KatA and KatY in Yersinia pestis.

Yajun Song, Yafang Tan, Ruifu Yang, 2008, DNA and cell biology.

Genome-wide transcriptional response of Yersinia pestis to stressful conditions simulating phagolysosomal environments.

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2006, Microbes and infection.

DNA microarray analysis of the heat- and cold-shock stimulons in Yersinia pestis.

Ruifu Yang, J. Bao, Z. Tong, 2005, Microbes and infection.

Global gene expression profile of Yersinia pestis induced by streptomycin.

Yajun Song, Ruifu Yang, Dongsheng Zhou, 2005, FEMS microbiology letters.

DNA Microarray Analysis of Genome Dynamics in Yersinia pestis: Insights into Bacterial Genome Microevolution and Niche Adaptation

Ruifu Yang, Xiuqing Zhang, J. Bao, 2004, Journal of bacteriology.

Identification of Signature Genes for Rapid and Specific Characterization of Yersinia pestis

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2004, Microbiology and immunology.

Host transcriptomic responses to pneumonic plague reveal that Yersinia pestis inhibits both the initial adaptive and innate immune responses in mice.

Ruifu Yang, Yujun Cui, Z. Du, 2017, International journal of medical microbiology : IJMM.

Reversible Gene Expression Control in Yersinia pestis by Using an Optimized CRISPR Interference System

Ruifu Yang, Yajun Song, Z. Du, 2019, Applied and Environmental Microbiology.

Diet-microbiota-metabolite interaction networks reveal key players in inflammatory bowel disease.

N. Qin, Ruifu Yang, Yu Zhou, 2019, Journal of digestive diseases.

Pathology and Pathogenesis of Yersinia pestis.

Z. Du, Xiaoyi Wang, 2016, Advances in experimental medicine and biology.

The Yersinia Type III secretion effector YopM Is an E3 ubiquitin ligase that induced necrotic cell death by targeting NLRP3

Ruifu Yang, Yanhong Zhang, Feixiang Wu, 2016, Cell Death & Disease.

IL-17A-dependent gut microbiota is essential for regulating diet-induced disorders in mice.

Chunyan Wu, N. Qin, Heping Zhang, 2017, Science bulletin.

Safety Evaluation of a Novel Strain of Bacteroides fragilis

Ruifu Yang, Yanping Han, Z. Du, 2017, Front. Microbiol..

A1S_2811, a CheA/Y‐like hybrid two‐component regulator from Acinetobacter baumannii ATCC17978, is involved in surface motility and biofilm formation in this bacterium

Ruifu Yang, Yujun Cui, Yajun Song, 2017, MicrobiologyOpen.

Insight into Bacterial Virulence Mechanisms against Host Immune Response via the Yersinia pestis-Human Protein-Protein Interaction Network

Jian Wang, Yafang Tan, Ruifu Yang, 2011, Infection and Immunity.

Identification and characterization of PhoP regulon members in Yersinia pestis biovar Microtus

Ruifu Yang, Dongsheng Zhou, He Gao, 2008, BMC Genomics.

The Iron-Responsive Fur Regulon in Yersinia pestis

Ruifu Yang, Dongsheng Zhou, He Gao, 2008, Journal of bacteriology.

Bioluminescent tracking of colonization and clearance dynamics of plasmid-deficient Yersinia pestis strains in a mouse model of septicemic plague.

Ruifu Yang, Yusen Zhou, Dongsheng Zhou, 2014, Microbes and infection.

Protein Microarray for Profiling Antibody Responses to Yersinia pestis Live Vaccine

Ruifu Yang, Qifeng Song, Lingxia Jiang, 2005, Infection and Immunity.

ChallengeOffspring from Yersinia pestis Protects from the Placenta and by Lactation Acquisition of Maternal Antibodies both

Dongsheng Zhou, Z. Du, Z. Qi, 2012 .

Development of an up-converting phosphor technology-based 10-channel lateral flow assay for profiling antibodies against Yersinia pestis.

Huijie Huang, Lihua Huang, Youbao Zhang, 2010, Journal of microbiological methods.

Identification of Novel Protein-Protein Interactions of Yersinia pestis Type III Secretion System by Yeast Two Hybrid System

Ruifu Yang, Zhaobiao Guo, Z. Du, 2013, PloS one.

Human Macrophages Clear the Biovar Microtus Strain of Yersinia pestis More Efficiently Than Murine Macrophages

Ruifu Yang, Yujun Cui, Yajun Song, 2019, Front. Cell. Infect. Microbiol..

Yersinia genome diversity disclosed by Yersinia pestis genome-wide DNA microarray.

Ruifu Yang, Dongsheng Zhou, Yanping Han, 2007, Canadian journal of microbiology.

Genomic comparison of Yersinia pestis and Yersinia pseudotuberculosis by combination of suppression subtractive hybridization and DNA microarray

Ruifu Yang, Jianguo Zhang, Dongsheng Zhou, 2006, Archives of Microbiology.

Antigenicity Analysis of Different Regions of the Severe Acute Respiratory Syndrome Coronavirus Nucleocapsid Protein

Ruifu Yang, Lingxia Jiang, Dongsheng Zhou, 2004, Clinical chemistry.

Competitive fitness and homologous recombination of SARS-CoV-2 variants of concern

Qi Chen, Hui Zhao, Yongqiang Deng, 2023, bioRxiv.

Generation and Characterization of Anti-Filovirus Nucleoprotein Monoclonal Antibodies

Ruifu Yang, X. Qiu, M. N. Rahim, 2019, Viruses.

Global analysis of iron assimilation and fur regulation in Yersinia pestis.

Yajun Song, Ruifu Yang, Dongsheng Zhou, 2006, FEMS microbiology letters.

Genetic variations in the pgm locus among natural isolates of Yersinia pestis.

Huanming Yang, Z. Tong, Yanping Han, 2005, The Journal of general and applied microbiology.

An Interaction between the Inner Rod Protein YscI and the Needle Protein YscF Is Required to Assemble the Needle Structure of the Yersinia Type Three Secretion System*

Yajun Song, Z. Du, Ya-fang Tan, 2017, The Journal of Biological Chemistry.

Analysis of Yops Secretion by Yersinia pestis Type III Secretion System

Z. Du, Shiyang Cao, 2018 .

Comparative Lysine Acetylome Analysis of Y. pestis YfiQ/CobB Mutants Reveals that Acetylation of SlyA Lys73 Significantly Promotes Biofilm Formation of Y. pestis

Ruifu Yang, Yuling Chen, Yajun Song, 2023, Microbiology spectrum.

Co-immunoprecipitation Analysis for the Detection of Protein–Protein Interactions in Yersinia pestis

Z. Du, Shiyang Cao, 2018 .

Yersinia pestis and host macrophages: immunodeficiency of mouse macrophages induced by YscW

Ruifu Yang, Yanping Han, Zhaobiao Guo, 2009, Immunology.

Sensitive detection of antibody against antigen F1 of Yersinia pestis by an antigen sandwich method using a portable fiber optic biosensor

Yafang Tan, Ruifu Yang, Zhaobiao Guo, 2007 .

A novel sORF gene mutant strain of Yersinia pestis vaccine EV76 offers enhanced safety and improved protection against plague

Yajun Song, Z. Du, Shiyang Cao, 2024, PLoS pathogens.

Interplays of mutations in waaA, cmk, and ail contribute to phage resistance in Yersinia pestis

Ruifu Yang, Xilin Zhao, Yujun Cui, 2023, Frontiers in Cellular and Infection Microbiology.

Correction for Zhao et al., “Outer Membrane Proteins Ail and OmpF of Yersinia pestis Are Involved in the Adsorption of T7-Related Bacteriophage Yep-phi”

Ruifu Yang, Dongsheng Zhou, Yujun Cui, 2018, Journal of Virology.