J. Nielsen

发表

Chemical shift prediction for protein structure calculation and quality assessment using an optimally parameterized force field.

N. Nielsen, H. Eghbalnia, J. Nielsen, 2012, Progress in nuclear magnetic resonance spectroscopy.

VirtualSpectrum, a tool for simulating peak list for multi-dimensional NMR spectra

N. Nielsen, J. Nielsen, 2014, Journal of Biomolecular NMR.

Enhanced anti-HIV-1 activity of G-quadruplexes comprising locked nucleic acids and intercalating nucleic acids

E. Pedersen, J. Nielsen, V. Filichev, 2010, Nucleic acids research.

NMR solution structures of LNA (locked nucleic acid) modified quadruplexes

J. Nielsen, K. Arar, M. Petersen, 2006, Nucleic Acids Research.

Solution structure of a locked nucleic acid modified quadruplex: introducing the V4 folding topology.

J. Nielsen, K. Arar, M. Petersen, 2009, Angewandte Chemie.

There is Diversity in Disorder—“In all Chaos there is a Cosmos, in all Disorder a Secret Order”

F. Mulder, J. Nielsen, 2016, Front. Mol. Biosci..

POTENCI: prediction of temperature, neighbor and pH-corrected chemical shifts for intrinsically disordered proteins

F. Mulder, J. Nielsen, 2018, Journal of Biomolecular NMR.

Erratum: Hydrogen bond rotations as a uniform structural tool for analyzing protein architecture

J. L. Jensen, B. Hammer, E. Andersen, 2014, Nature Communications.

Hydrogen bond rotations as a uniform structural tool for analyzing protein architecture

J. L. Jensen, B. Hammer, E. Andersen, 2014, Nature Communications.

Quantitative Protein Disorder Assessment Using NMR Chemical Shifts.

F. Mulder, J. Nielsen, 2020, Methods in molecular biology.

Solution structure of a dsDNA:LNA triplex.

J. Nielsen, M. Petersen, Jesper Sørensen, 2004, Nucleic acids research.

Structure and Function of the Bacterial Protein Toxin Phenomycin.

Esben B. Svenningsen, F. Mulder, L. Van, 2020, Structure.

POTENCI: prediction of temperature, neighbor and pH-corrected chemical shifts for intrinsically disordered proteins

F. Mulder, J. Nielsen, 2018, Journal of Biomolecular NMR.

CheSPI: chemical shift secondary structure population inference

F. Mulder, J. Nielsen, 2021, Journal of Biomolecular NMR.

VirtualSpectrum, a tool for simulating peak list for multi-dimensional NMR spectra

J. Nielsen, N. C. Nielsen, 2014, Journal of Biomolecular NMR.

Automated robust and accurate assignment of protein resonances for solid state NMR

M. Bjerring, J. Nielsen, N. C. Nielsen, 2014, Journal of Biomolecular NMR.

Automated robust and accurate assignment of protein resonances for solid state NMR

Jakob Toudahl Nielsen, Niels Chr Nielsen, Morten Bjerring, 2014, Journal of biomolecular NMR.

Modulation of fibrillation of hIAPP core fragments by chemical modification of the peptide backbone.

D. Otzen, F. Besenbacher, M. Dong, 2012, Biochimica et biophysica acta.

Accurate measurements of ¹³C-¹³C distances in uniformly ¹³C-labeled proteins using multi-dimensional four-oscillating field solid-state NMR spectroscopy.

N. Khaneja, N. Nielsen, M. Bjerring, 2014, The Journal of chemical physics.

Clinical utility of foam dressings in wound management: a review

J. Nielsen, K. Fogh, 2015 .

The natural, peptaibolic peptide SPF-5506-A4 adopts a β-bend spiral structure, shows low hemolytic activity and targets membranes through formation of large pores.

D. Otzen, J. Nielsen, T. Skrydstrup, 2015, Biochimica et biophysica acta.

Mutation in transforming growth factor beta induced protein associated with granular corneal dystrophy type 1 reduces the proteolytic susceptibility through local structural stabilization.

J. Enghild, D. Otzen, N. Nielsen, 2013, Biochimica et biophysica acta.

NMR structure of an alpha-L-LNA:RNA hybrid: structural implications for RNase H recognition.

P. Stein, J. Nielsen, M. Petersen, 2003, Nucleic Acids Research.

Unique identification of supramolecular structures in amyloid fibrils by solid-state NMR spectroscopy.

D. Otzen, N. Nielsen, M. Bjerring, 2009, Angewandte Chemie.

i-Motif formation with locked nucleic acid (LNA).

S. Maiti, J. Nielsen, M. Petersen, 2007, Angewandte Chemie.

Quality and bias of protein disorder predictors

F. Mulder, J. Nielsen, 2019, Scientific Reports.

In situ solid-state NMR spectroscopy of protein in heterogeneous membranes: the baseplate antenna complex of Chlorobaculum tepidum.

N. Nielsen, M. Bjerring, N. Frigaard, 2012, Angewandte Chemie.

Solution Structure of the Cutibacterium acnes-Specific Protein RoxP and Insights Into Its Antioxidant Activity

F. Mulder, H. Brüggemann, B. Paetzold, 2022, Frontiers in Cellular and Infection Microbiology.

Using Topology to Estimate Structural Similarities of Proteins

J. L. Jensen, J. Andersen, J. Nielsen, 2021, 2111.14489.

Prediction of H-Bond Rotations from Protein H-Bond Topology

J. Andersen, J. Nielsen, Yuki Koyanagi, 2021, 2111.14459.

CheSPI: chemical shift secondary structure population inference

F. Mulder, J. Nielsen, 2021, Journal of Biomolecular NMR.

ODiNPred: comprehensive prediction of protein order and disorder

Frans A A Mulder, Rupashree Dass, Jakob Toudahl Nielsen, 2020, Scientific Reports.

In situ high-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum

N. Nielsen, M. Bjerring, N. Frigaard, 2016, Nature Communications.

Resolution-Enhanced Solid-State NMR13C−13C Correlation Spectroscopy by Optimal Control Dipolar-Driven Spin-State-Selective Coherence Transfer

C. Kehlet, Zdeněk Tošner, N. Nielsen, 2011 .

Coexistence of ribbon and helical fibrils originating from hIAPP20–29 revealed by quantitative nanomechanical atomic force microscopy

D. Otzen, F. Besenbacher, M. Dong, 2013, Proceedings of the National Academy of Sciences.

The binding mechanism of a peptidic cyclic serine protease inhibitor.

C. Weydert, H. P. Sørensen, N. Nielsen, 2011, Journal of molecular biology.

A Cyclic Peptidic Serine Protease Inhibitor: Increasing Affinity by Increasing Peptide Flexibility

H. P. Sørensen, Mingdong Huang, P. Andreasen, 2014, PloS one.

Bicyclic Peptide Inhibitor of Urokinase‐Type Plasminogen Activator: Mode of Action

F. Mulder, N. Nielsen, Mingdong Huang, 2013, Chembiochem : a European journal of chemical biology.

Symmetry-based dipolar recoupling by optimal control: band-selective experiments for assignment of solid-state NMR spectra of proteins.

A. B. Nielsen, Jakob Toudahl Nielsen, Morten Bjerring, 2009, The Journal of chemical physics.

Scanning tunneling microscopy reveals single-molecule insights into the self-assembly of amyloid fibrils.

E. Lægsgaard, D. Otzen, F. Besenbacher, 2012, ACS nano.

LNA and α-L-LNA: Towards Therapeutic Applications

S. Douthwaite, J. Wengel, B. Vester, 2003 .

LNA and alpha-L-LNA: towards therapeutic applications.

S. Douthwaite, J. Wengel, B. Vester, 2003, Nucleosides, nucleotides & nucleic acids.