P. Fuchs

发表

Toward Atomistic Resolution Structure of Phosphatidylcholine Headgroup and Glycerol Backbone at Different Ambient Conditions

A. Lyubartsev, T. Róg, O. H. S. Ollila, 2015, The journal of physical chemistry. B.

Modeling and Molecular Dynamics of HPA-1a and -1b Polymorphisms: Effects on the Structure of the β3 Subunit of the αIIbβ3 Integrin

A. D. de Brevern, Pierre Poulain, P. Fuchs, 2012, PloS one.

Modeling and molecular dynamics simulations of the V33 variant of the integrin subunit β3: Structural comparison with the L33 (HPA-1a) and P33 (HPA-1b) variants.

A. D. de Brevern, Pierre Poulain, P. Fuchs, 2014, Biochimie.

High accuracy prediction of β‐turns and their types using propensities and multiple alignments

A. Alix, P. Fuchs, 2005 .

Kinetics and thermodynamics of type VIII beta-turn formation: a CD, NMR, and microsecond explicit molecular dynamics study of the GDNP tetrapeptide.

A. Bonvin, A. Alix, A. Pepe, 2006, Biophysical journal.

A GROMOS-Compatible Force Field for Small Organic Molecules in the Condensed Phase: The 2016H66 Parameter Set.

Pascal T. Merz, P. Hünenberger, S. Riniker, 2016, Journal of chemical theory and computation.

Molecular dynamics of membrane peptides and proteins: principles and comparison to experimental data.

P. Fuchs, 2010, Methods in molecular biology.

Targeting surface voids to counter membrane disorders in lipointoxication-related diseases

N. Morgan, B. Antonny, Lydie Vamparys, 2016, Journal of Cell Science.

Effect of Dimethyl Sulfoxide on the Binding of 1-Adamantane Carboxylic Acid to β- and γ-Cyclodextrins

W. Urbach, N. Taulier, P. Fuchs, 2018, ACS omega.

Amphipathic-Lipid-Packing-Sensor interactions with lipids assessed by atomistic molecular dynamics.

C. Etchebest, R. Gautier, P. Fuchs, 2011, Biochimica et biophysica acta.

The heptad repeat domain 1 of Mitofusin has membrane destabilization function in mitochondrial fusion

P. Fuchs, D. Tareste, A. Bavdek, 2018, EMBO reports.

Structural Bases for the Involvement of Phosphatidylinositol-4,5-bisphosphate in the Internalization of the Cell-Penetrating Peptide Penetratin.

A. Walrant, S. Sagan, L. Carlier, 2022, ACS chemical biology.

Coarse-grained simulations of the HIV-1 matrix protein anchoring: revisiting its assembly on membrane domains.

L. Chaloin, D. Muriaux, C. Favard, 2014, Biophysical journal.

Anionic lipids induce a fold-unfold transition in the membrane-translocating engrailed homeodomain.

A. Joliot, L. Carlier, O. Lequin, 2022, Biochimica et biophysica acta. Biomembranes.

Inverse Conformational Selection in Lipid-Protein Binding.

Salla I. Virtanen, T. Piggot, O. H. S. Ollila, 2021, Journal of the American Chemical Society.

Influence of the Treatment of Nonbonded Interactions on the Thermodynamic and Transport Properties of Pure Liquids Calculated Using the 2016H66 Force Field.

P. Hünenberger, P. Fuchs, B. Horta, 2019, Journal of chemical theory and computation.

New Interaction Parameters for Oxygen Compounds in the GROMOS Force Field: Improved Pure-Liquid and Solvation Properties for Alcohols, Ethers, Aldehydes, Ketones, Carboxylic Acids, and Esters.

W. V. van Gunsteren, P. Hünenberger, P. Fuchs, 2011, Journal of chemical theory and computation.

PackMem: A Versatile Tool to Compute and Visualize Interfacial Packing Defects in Lipid Bilayers.

S. Vanni, R. Gautier, B. Antonny, 2018, Biophysical journal.

A GROMOS Parameter Set for Vicinal Diether Functions: Properties of Polyethyleneoxide and Polyethyleneglycol.

Philippe H. Hünenberger, Bruno A. C. Horta, Halvor S. Hansen, 2012, Journal of chemical theory and computation.

NMR and molecular dynamics studies of an autoimmune myelin basic protein peptide and its antagonist: structural implications for the MHC II (I-Au)-peptide complex from docking calculations.

Theodore V. Tselios, A. Bonvin, N. V. van Nuland, 2004, European journal of biochemistry.

On the Effect of the Various Assumptions and Approximations used in Molecular Simulations on the Properties of Bio-Molecular Systems: Overview and Perspective on Issues.

X. Daura, A. Mark, W. V. van Gunsteren, 2020, Chemphyschem : a European journal of chemical physics and physical chemistry.

Meet-U: Educating through research immersion

Alessandra Carbone, Yann Ponty, Guillaume Bouvier, 2018, PLoS Comput. Biol..

On the orientation of a designed transmembrane peptide: toward the right tilt angle?

J. Killian, C. Etchebest, P. Fuchs, 2007, Journal of the American Chemical Society.

Conical lipids in flat bilayers induce packing defects similar to that induced by positive curvature.

C. Etchebest, D. Tieleman, S. Vanni, 2013, Biophysical journal.

Amphipathic lipid packing sensor motifs: probing bilayer defects with hydrophobic residues.

C. Etchebest, S. Vanni, G. Drin, 2013, Biophysical journal.

Molecular Study of Ultrasound-Triggered Release of Fluorescein from Liposomes.

W. Urbach, N. Taulier, P. Fuchs, 2021, Langmuir.

The CX3CL1 oligomerization is required for efficient CX3CR1-specific cell adherence

A. Jawhari, O. Lequin, F. Pincet, 2019, bioRxiv.

Interpretation of 2H-NMR experiments on the orientation of the transmembrane helix WALP23 by computer simulations.

D. Tieleman, L. Monticelli, P. Fuchs, 2010, Biophysical journal.

Interdigitation between Triglycerides and Lipids Modulates Surface Properties of Lipid Droplets.

S. Vanni, R. Gautier, C. L. Jackson, 2017, Biophysical journal.

A coarse-grained MARTINI model of polyethylene glycol and of polyoxyethylene alkyl ether surfactants.

L. Monticelli, G. Rossi, J. Barnoud, 2012, The journal of physical chemistry. B.

Simulating Bilayers of Nonionic Surfactants with the GROMOS-Compatible 2016H66 Force Field.

P. Hünenberger, W. Urbach, N. Taulier, 2017, Langmuir : the ACS journal of surfaces and colloids.

How to best estimate the viscosity of lipid bilayers.

I. Broutin, W. Urbach, N. Taulier, 2021, Biophysical chemistry.

Nuclear pore targeting of the yeast Pom33 nucleoporin depends on karyopherin and lipid binding

V. Doye, G. Schlenstedt, P. Fuchs, 2015, Journal of Cell Science.

Biophysical Insight on the Membrane Insertion of an Arginine-Rich Cell-Penetrating Peptide

I. Alves, Lydie Vamparys, A. Grélard, 2019, International journal of molecular sciences.

Cooperation of Conical and Polyunsaturated Lipids to Regulate Initiation and Processing of Membrane Fusion

J. Rothman, F. Pincet, P. Fuchs, 2021, Frontiers in Molecular Biosciences.

CX3CL1 homo-oligomerization drives cell-to-cell adherence

A. Jawhari, O. Lequin, F. Pincet, 2020, Scientific Reports.

Insights on pH-dependent conformational changes of mosquito odorant binding proteins by molecular dynamics simulations

R. Sowdhamini, B. Offmann, P. Fuchs, 2014, Journal of biomolecular structure & dynamics.

buildH: Build hydrogen atoms from united-atom molecular dynamics of lipids and calculate the order parameters

Pierre Poulain, P. Fuchs, H. Santuz, 2021, J. Open Source Softw..

The heptad repeat domain 1 of Mitofusin has membrane destabilization function in mitochondrial fusion

P. Fuchs, D. Tareste, A. Bavdek, 2018, EMBO reports.

Lys716 in the transmembrane domain of yeast mitofusin Fzo1 modulates anchoring and fusion

A. Taly, Laetitia Cavellini, P. Fuchs, 2023, bioRxiv.