Lukas Windhager

Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution

S. Kaufmann, S. Schreiber, R. Zimmer, 2012, Genome research.

Petri Nets with Fuzzy Logic (PNFL): Reverse Engineering and Parametrization

R. Küffner, R. Zimmer, Lukas Windhager, 2010, PloS one.

Experiment and mathematical modeling of gene expression dynamics in a cell-free system.

R. Zimmer, J. Rädler, T. Stögbauer, 2012, Integrative biology : quantitative biosciences from nano to macro.

Refining Ensembles of Predicted Gene Regulatory Networks Based on Characteristic Interaction Sets

R. Küffner, J. Zierer, Lukas Windhager, 2014, PloS one.

Modeling of dynamic systems with Petri nets and fuzzy logic

Lukas Windhager, Lukas Windhager, 2013 .

4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response

L. Dölken, C. Friedel, D. Eick, 2013, RNA biology.

Real-time Transcriptional Profiling of Cellular and Viral Gene Expression during Lytic Cytomegalovirus Infection

Thomas Bonfert, Caroline C. Friedel, Ralf Zimmer, 2012, PLoS pathogens.

Strain-specific genes of Helicobacter pylori: genome evolution driven by a novel type IV secretion system and genomic island transfer

R. Zimmer, R. Haas, R. Hoffmann, 2010, Nucleic acids research.

Inferring gene regulatory networks by ANOVA

Ralf Zimmer, Robert Küffner, Pegah Tavakkolkhah, 2012, Bioinform..