Zhiye Guo

发表

DeepDist: real-value inter-residue distance prediction with deep residual convolutional network

Jianlin Cheng, Jie Hou, Tianqi Wu, 2020, bioRxiv.

Correction to: DeepDist: real‑value inter‑residue distance prediction with deep residual convolutional network

Jianlin Cheng, Jie Hou, Tianqi Wu, 2021, BMC Bioinform..

Improving protein tertiary structure prediction by deep learning and distance prediction in CASP14

Jianlin Cheng, Jie Hou, Tianqi Wu, 2021, bioRxiv.

Value of Angiographic Regional Circulation Signs in Predicting Hemorrhagic Transformation after Endovascular Thrombectomy.

Zhiye Guo, G. Xiao, Qianmei Jiang, 2022, Journal of neuroradiology = Journal de neuroradiologie.

Multi-head attention-based U-Nets for predicting protein domain boundaries using 1D sequence features and 2D distance maps

Jianlin Cheng, Zhiye Guo, S. Mahmud, 2022, BMC Bioinformatics.

The MULTICOM Protein Structure Prediction Server Empowered by Deep Learning and Contact Distance Prediction.

Jianlin Cheng, Jie Hou, Tianqi Wu, 2020, Methods in molecular biology.

Prediction of inter-chain distance maps of protein complexes with 2D attention-based deep neural networks

J. Skolnick, Jianlin Cheng, Zhiye Guo, 2022, bioRxiv.

Improving deep learning-based protein distance prediction in CASP14

Jianlin Cheng, Tianqi Wu, Zhiye Guo, 2021, bioRxiv.

DeepDist: real-value inter-residue distance prediction with deep residual convolutional network

Jianlin Cheng, Jie Hou, Tianqi Wu, 2021, BMC Bioinformatics.

DNSS2: improved ab initio protein secondary structure prediction using advanced deep learning architectures

Jianlin Cheng, Jie Hou, Zhiye Guo, 2019, bioRxiv.

Combination of deep neural network with attention mechanism enhances the explainability of protein contact prediction

Chen Chen, Jianlin Cheng, Tianqi Wu, 2020, bioRxiv.

Diffusion Models in Bioinformatics: A New Wave of Deep Learning Revolution in Action

Jianlin Cheng, Duolin Wang, Zhiye Guo, 2023, ArXiv.

Atomic protein structure refinement using all-atom graph representations and SE(3)-equivariant graph transformer

Jianlin Cheng, Tianqi Wu, Zhiye Guo, 2023, Bioinform..

Protein model accuracy estimation empowered by deep learning and inter-residue distance prediction in CASP14

Jianlin Cheng, Jie Hou, Tianqi Wu, 2021, Scientific Reports.

Deep Ranking in Template-free Protein Structure Prediction

Nasrin Akhter, Amarda Shehu, Jianlin Cheng, 2020, BCB.

Single-cell Hi-C data enhancement with deep residual and generative adversarial networks

Jianlin Cheng, Zhiye Guo, Yanli Wang, 2023, Bioinformatics.

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins

Silvio C. E. Tosatto, M. Y. Lobanov, Md. Wasi Ul Kabir, 2023, Nucleic Acids Res..

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Johnathan D. Guest, Adam K. Sieradzan, Charles W Christoffer, 2023, Proteins.

Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15

Jianlin Cheng, Chen Chen, Tianqi Wu, 2023, bioRxiv.

Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15

Tianqi Wu, Zhiye Guo, Chen Chen, 2023, Communications biology.

Diffusion models in bioinformatics and computational biology.

Duolin Wang, Zhiye Guo, Jian Liu, 2023, Nature reviews bioengineering.

Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15

Jianlin Cheng, Chen Chen, Tianqi Wu, 2023, bioRxiv.