Hanshuang Li

发表

Machine Learning of Single-Cell Transcriptome Highly Identifies mRNA Signature by Comparing F-Score Selection with DGE Analysis

Yongchun Zuo, Wuritu Yang, Lei Zheng, 2020, Molecular therapy. Nucleic acids.

Characterization of DNA Methylation Patterns and Mining of Epigenetic Markers During Genomic Reprogramming in SCNT Embryos

Yongchun Zuo, Buhe Nashun, Hanshuang Li, 2020, Frontiers in Cell and Developmental Biology.

Prediction of Gene Expression Patterns With Generalized Linear Regression Model

Yongchun Zuo, Shuai Liu, Hanshuang Li, 2019, Front. Genet..

The spatial binding model of the pioneer factor Oct4 with its target genes during cell reprogramming

Lei Yang, Yongchun Zuo, Chunshen Long, 2019, Computational and structural biotechnology journal.

A Comparative Analysis of Single-Cell Transcriptome Identifies Reprogramming Driver Factors for Efficiency Improvement

Yongchun Zuo, Wuritu Yang, Lei Zheng, 2020, Molecular therapy. Nucleic acids.

Dppa2/4 as a trigger of signaling pathways to promote zygote genome activation by binding to CG-rich region.

Yongchun Zuo, Xueling Li, Chunshen Long, 2020, Briefings in bioinformatics.

Dppa2/4 promotes zygotic genome activation by binding to GC-rich region in signaling pathways

Yongchun Zuo, Chunshen Long, Jinzhu Xiang, 2020, bioRxiv.

Deep learning-based transcription factor activity for stratification of breast cancer patients.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2022, Biochimica et biophysica acta. Gene regulatory mechanisms.

Competitive binding of TET1 and DNMT3A/B cooperates the DNA methylation pattern in human embryonic stem cells.

Yongchun Zuo, Siqi Yang, Chunshen Long, 2022, Biochimica et biophysica acta. Gene regulatory mechanisms.

Reprogramming barriers in bovine cells nuclear transfer revealed by single‐cell RNA‐seq analysis

S. Bao, Yongchun Zuo, Chunshen Long, 2022, Journal of cellular and molecular medicine.

Somatic Cell Nuclear Transfer Embryos Show Massive Dysregulation of Genes Involved in Transcription Pathways

Yongchun Zuo, Chunshen Long, Hanshuang Li, 2020, bioRxiv.

EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis

Yong-qiang Xing, Yongchun Zuo, Lei Zheng, 2022, Nucleic acids research.

Nuclear Transfer Arrest Embryos Show Massive Dysregulation of Genes Involved in Transcription Pathways

Yongchun Zuo, Wuritu Yang, Chunshen Long, 2021, International journal of molecular sciences.

Analysis of the Epigenetic Signature of Cell Reprogramming by Computational DNA Methylation Profiles

Yongchun Zuo, Lei Zheng, Mingmin Song, 2020 .

A cost-effective machine learning-based method for preeclampsia risk assessment and driver genes discovery

Yong-qiang Xing, Yongchun Zuo, Hongya Wang, 2023, Cell & Bioscience.

The Cumulative Formation of R-loop Interacts with Histone Modifications to Shape Cell Reprogramming

Yongchun Zuo, Chunshen Long, Hanshuang Li, 2022, International journal of molecular sciences.

eHSCPr discriminating the cell identity involved in endothelial to hematopoietic transition

Hao Wang, Yongchun Zuo, Pengfei Liang, 2021, Bioinform..

Characterizing Cellular Differentiation Potency and Waddington Landscape via Energy Indicator

L. Luo, Yongchun Zuo, Chunshen Long, 2023, Research.

Journal Pre-proof Machine Learning of Single-cell Transcriptome Highly Identify mRNA Signature by Comparing F-score Selection with Differential Expression Analysis

Yongchun Zuo, Wuritu Yang, Lei Zheng, 2020 .

Deciphering the decisive factors driving fate bifurcations in somatic cell reprogramming

Yongchun Zuo, Chunshen Long, Pengfei Liang, 2023, Molecular therapy. Nucleic acids.

Characterized the diversity of ABCB1 subtypes in immunogenomic landscape for predicting the drug response in breast cancer.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2022, Methods.

Chromatin region binning of gene expression for improving embryo cell subtype identification

Yongchun Zuo, Chunshen Long, Pengfei Liang, 2024, Computers in Biology and Medicine.

An increment of diversity method for cell state trajectory inference of time-series scRNA-seq data

Yongchun Zuo, Chunshen Long, Pengfei Liang, 2024, Fundamental research.

SpaNCMG: improving spatial domains identification of spatial transcriptomics using neighborhood-complementary mixed-view graph convolutional network

Yongchun Zuo, Chunshen Long, Hanshuang Li, 2024, Briefings Bioinform..