Daniel A Beard

发表

A parallel algorithm for reverse engineering of biological networks.

Feng Qi, Jason N Bazil, Daniel A Beard, 2011, Integrative biology : quantitative biosciences from nano to macro.

Specification, construction, and exact reduction of state transition system models of biochemical processes.

Daniel A Beard, Scott M Bugenhagen, 2012, The Journal of chemical physics.

The Role of Theoretical Modeling in Microcirculation Research

Daniel A Beard, Axel R Pries, Timothy W Secomb, 2008, Microcirculation.

Ab initio prediction of thermodynamically feasible reaction directions from biochemical network stoichiometry.

Hong Qian, Feng Yang, Daniel A Beard, 2005, Metabolic engineering.

Correction: An In-Silico Model of Lipoprotein Metabolism and Kinetics for the Evaluation of Targets and Biomarkers in the Reverse Cholesterol Transport Pathway

Daniel A Beard, James Lu, Katrin Hü Bner, 2014, PLoS Comput. Biol..

Extreme pathways and Kirchhoff's second law.

Daniel A Beard, Bernhard Ø Palsson, Nathan D Price, 2002, Biophysical journal.

Comments on Point:Counterpoint: Muscle lactate and H⁺ production do/do not have a 1:1 association in skeletal muscle. Calculations of Robergs support the view of Vinnakota and Kushmerick.

Daniel A Beard, 2011, Journal of applied physiology.

A biophysically based mathematical model for the kinetics of mitochondrial calcium uniporter.

Daniel A Beard, Ranjan K Dash, D. Beard, 2009, Biophysical journal.

Myocardial oxygenation in isolated hearts predicted by an anatomically realistic microvascular transport model.

Daniel A Beard, D. Beard, E. Feigl, 2003, American journal of physiology. Heart and circulatory physiology.

Physiologically based pharmacokinetic tissue compartment model selection in drug development and risk assessment.

Daniel A Beard, D. Beard, Matthew D Thompson, 2012, Journal of pharmaceutical sciences.

Phosphate metabolite concentrations and ATP hydrolysis potential in normal and ischaemic hearts

Daniel A Beard, Jianyi(Jay) Zhang, D. Beard, 2008, The Journal of physiology.

Experimentally observed phenomena on cardiac energetics in heart failure emerge from simulations of cardiac metabolism

Daniel A Beard, D. Beard, Fan Wu, 2009, Proceedings of the National Academy of Sciences.

A computational analysis of the long-term regulation of arterial pressure.

Daniel A Beard, Klas H. Pettersen, Klas H Pettersen, 2013, F1000Research.

Kinetics and regulation of mammalian NADH-ubiquinone oxidoreductase (Complex I).

Daniel A Beard, Ranjan K Dash, D. Beard, 2010, Biophysical journal.

Comparison of buffer and red blood cell perfusion of guinea pig heart oxygenation.

Daniel A Beard, D. Beard, E. Feigl, 2003, American journal of physiology. Heart and circulatory physiology.

Understanding Guyton's venous return curves.

Daniel A Beard, D. Beard, E. Feigl, 2011, American journal of physiology. Heart and circulatory physiology.

Detailed kinetics and regulation of mammalian NAD-linked isocitrate dehydrogenase.

Daniel A Beard, D. Beard, F. Qi, 2008, Biochimica et biophysica acta.

Region-Based Convolutional Neural Nets for Localization of Glomeruli in Trichrome-Stained Whole Kidney Sections.

Daniel A Beard, Alex Dayton, John D Bukowy, 2018, Journal of the American Society of Nephrology : JASN.

Multiple ion binding equilibria, reaction kinetics, and thermodynamics in dynamic models of biochemical pathways.

Daniel A Beard, Kalyan C Vinnakota, M. Kushmerick, 2009, Methods in enzymology.

Computational modeling of physiological systems.

Daniel A Beard, James B Bassingthwaighte, Andrew S Greene, 2005, Physiological genomics.

Unbiased rotational moves for rigid-body dynamics.

Tamar Schlick, Daniel A Beard, T. Schlick, 2003, Biophysical journal.

The effects of reversibility and noise on stochastic phosphorylation cycles and cascades.

Clark A. Miller, Daniel A Beard, D. Beard, 2008, Biophysical journal.

Dynamics of cross-bridge cycling, ATP hydrolysis, force generation, and deformation in cardiac muscle.

Daniel A Beard, Scott M Bugenhagen, Scott M. Bugenhagen, 2016, Journal of molecular and cellular cardiology.

Identifying physiological origins of baroreflex dysfunction in salt-sensitive hypertension in the Dahl SS rat.

Daniel A Beard, Scott M Bugenhagen, Scott M. Bugenhagen, 2010, Physiological genomics.

Catalytic Coupling of Oxidative Phosphorylation, ATP Demand, and Reactive Oxygen Species Generation.

Jason N Bazil, Daniel A Beard, Kalyan C Vinnakota, 2016, Biophysical journal.

Oxidative ATP synthesis in skeletal muscle is controlled by substrate feedback.

Daniel A Beard, Jeroen A L Jeneson, D. Beard, 2007, American journal of physiology. Cell physiology.

Identification of the Catalytic Mechanism and Estimation of Kinetic Parameters for Fumarase*

Daniel A Beard, Muriel Mescam, Kalyan C Vinnakota, 2011, The Journal of Biological Chemistry.

Analysis of cardiac mitochondrial Na+–Ca2+ exchanger kinetics with a biophysical model of mitochondrial Ca2+ handing suggests a 3: 1 stoichiometry

Daniel A Beard, Ranjan K Dash, D. Beard, 2008, The Journal of physiology.

Thermodynamic calculations for biochemical transport and reaction processes in metabolic networks.

Vassily Hatzimanikatis, Daniel A Beard, Anne Kümmel, 2010, Biophysical journal.