A. Klepikova

发表

A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling.

M. Logacheva, A. Penin, A. Kasianov, 2016, The Plant journal : for cell and molecular biology.

Early B-cell factor 1 (EBF1) is critical for transcriptional control of SLAMF1 gene in human B cells.

K. V. Korneev, Anna V Klepikova, I. Kulakovskiy, 2016, Biochimica et biophysica acta.

Effect of method of deduplication on estimation of differential gene expression using RNA-seq

M. Logacheva, A. Penin, A. Kasianov, 2017, PeerJ.

High-Resolution Transcriptome Atlas and Improved Genome Assembly of Common Buckwheat, Fagopyrum esculentum

M. Logacheva, A. Penin, A. Kasianov, 2020, bioRxiv.

Extraordinary Genetic Diversity in a Wood Decay Mushroom

Yana Safonova, A. Kondrashov, M. Logacheva, 2015, Molecular biology and evolution.

The Minor Variant of the Single-Nucleotide Polymorphism rs3753381 Affects the Activity of a SLAMF1 Enhancer

I. Kulakovskiy, I. Vorontsov, D. Kuprash, 2017, Acta naturae.

The Influence of the Minor Short Isoform of Securin (PTTG1) on Transcription is Significantly Different from the Impact of the Full Isoform

A. Schwartz, A. Klepikova, D. E. Demin, 2020, Molecular Biology.

The Influence of the Minor Short Isoform of Securin (PTTG1) on Transcription is Significantly Different from the Impact of the Full Isoform

A. Schwartz, A. Klepikova, D. E. Demin, 2020, Molecular Biology.

Stimulation of adventitious root formation by the oligosaccharin OSRG at the transcriptome level

T. Gorshkova, A. Klepikova, N. Mokshina, 2019, Plant signaling & behavior.

Comparative Analysis of Developmental Transcriptome Maps of Arabidopsis thaliana and Solanum lycopersicum

M. Logacheva, A. Penin, A. Kasianov, 2019, Genes.

lepidium-like, a Naturally Occurring Mutant of Capsella bursa-pastoris, and Its Implications on the Evolution of Petal Loss in Cruciferae

D. Sokoloff, A. Penin, A. Kasianov, 2021, Frontiers in Plant Science.

Development of potato (Solanum tuberosum L.) plants with StLEAFY knockout

R. Komakhin, A. Klepikova, A. Babakov, 2022, Planta.

Development of potato (Solanum tuberosum L.) plants with StLEAFY knockout

R. Komakhin, A. Klepikova, A. Babakov, 2022, Planta.

Constitutive Expression of NRAS with Q61R Driver Mutation Activates Processes of Epithelial–Mesenchymal Transition and Leads to Substantial Transcriptome Change of Nthy-ori 3–1 Thyroid Epithelial Cells

M. A. Afanasyeva, A. Schwartz, A. Klepikova, 2019, Biochemistry (Moscow).

Transcriptome‐based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection

A. Kondrashov, L. Yampolsky, M. Logacheva, 2017, Molecular ecology.

iPSC-Derived Macrophages: The Differentiation Protocol Affects Cell Immune Characteristics and Differentiation Trajectories

I. Lyadova, A. Klepikova, O. Sheveleva, 2022, International journal of molecular sciences.

Transcriptome atlas of Phalaenopsis equestris

M. Logacheva, A. Penin, A. Kasianov, 2020, bioRxiv.

Gene Expression Maps in Plants: Current State and Prospects

Anna V Klepikova, Aleksey A Penin, A. Penin, 2019, Plants.

An update to database TraVA: organ-specific cold stress response in Arabidopsis thaliana

I. Kulakovskiy, M. Logacheva, A. Penin, 2019, BMC plant biology.

Interspecific comparison of gene expression profiles using machine learning

M. Logacheva, A. Penin, A. Kasianov, 2023, PLoS Comput. Biol..

High‐quality genome assembly of Capsella bursa‐pastoris reveals asymmetry of regulatory elements at early stages of polyploid genome evolution

A. Kondrashov, I. Kulakovskiy, M. Logacheva, 2017, The Plant journal : for cell and molecular biology.

RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation

M. Logacheva, A. Penin, S. Dmitriev, 2015, BMC Genomics.

Crossing-Over in a Hypervariable Species Preferentially Occurs in Regions of High Local Similarity

A. Kondrashov, F. Kondrashov, M. Logacheva, 2014, Molecular biology and evolution.

NGS-based identification of druggable alterations and signaling pathways – hepatocellular carcinoma case report

E. Nabieva, A. Kondrashov, E. Kotelnikova, 2015 .

A sustained deficiency of mitochondrial respiratory complex III induces an apoptotic cell death through the p53-mediated inhibition of pro-survival activities of the activating transcription factor 4

P. Chumakov, M. Logacheva, A. Penin, 2014, Cell Death and Disease.

RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation

Sergey E. Dmitriev, Maria D. Logacheva, Anna V. Klepikova, 2015, BMC Genomics.

FACS Isolation of Viable Cells in Different Cell Cycle Stages from Asynchronous Culture for RNA Sequencing.

A. Mironov, M. Logacheva, A. Zharikova, 2018, Methods in molecular biology.

The Influence of the Minor Short Isoform of Securin (PTTG1) on Transcription is Significantly Different from the Impact of the Full Isoform

A. Schwartz, A. Klepikova, A. Uvarova, 2020, Molecular Biology.

Transcriptome-based identification of PDGFA as a candidate secreted biomarker for hepatocellular carcinoma

E. Kotelnikova, M. Logacheva, A. Penin, 2016 .

Origin and diversity of Capsella bursa-pastoris from the genomic point view

M. Logacheva, A. Penin, A. Kasianov, 2023, bioRxiv.

The Minor Variant of the Single-Nucleotide Polymorphism rs3753381 Affects the Activity of a SLAMF1 Enhancer

I. Kulakovskiy, I. Vorontsov, A. Klepikova, 2017, Acta naturae.

M. A. Afanasyeva, A. Schwartz, A. Klepikova, 2019, Biochemistry (Moscow).

Trans2express – de novo transcriptome assembly pipeline optimized for gene expression analysis

M. Logacheva, A. Penin, A. Kasianov, 2024, bioRxiv.

An update to database TraVA: organ-specific cold stress response in Arabidopsis thaliana

I. Kulakovskiy, M. Logacheva, A. Penin, 2019, BMC Plant Biology.