J. Scott

发表

An Insect Herbivore Microbiome with High Plant Biomass-Degrading Capacity

Lynne A. Goodwin, S. Tringe, T. Donohue, 2010, PLoS genetics.

The Genome Sequence of the Leaf-Cutter Ant Atta cephalotes Reveals Insights into Its Obligate Symbiotic Lifestyle

Brian R. Johnson, Erich Bornberg-Bauer, Steven C. Slater, 2011, PLoS genetics.

Convergent Bacterial Microbiotas in the Fungal Agricultural Systems of Insects

Susannah G. Tringe, Kier D. Klepzig, Michael Poulsen, 2014, mBio.

Mycangimycin, a Polyene Peroxide from a Mutualist Streptomyces sp.

D. Oh, J. Clardy, C. Currie, 2009, Organic letters.

Microbial Iron Oxidation in the Arctic Tundra and Its Implications for Biogeochemical Cycling

W. Bowden, D. Emerson, J. Scott, 2015, Applied and Environmental Microbiology.

Biogeochemical Observations of the Kavachi Submarine Volcano ( Solomon Islands ) EXPLORING THE “ SHARKCANO ”

Brennan T. Phillips, Katherine A. Kelley, M. Dunbabin, 2016 .

Using in situ voltammetry as a tool to identify and characterize habitats of iron-oxidizing bacteria: from fresh water wetlands to hydrothermal vent sites.

A. Findlay, C. Chan, D. Emerson, 2014, Environmental science. Processes & impacts.

Ant Fungus Gardens Recalcitrant Plant Polymers in Leaf-Cutter Diverse Enzymes for the Degradation of Leucoagaricus gongylophorus Produces

Kristin E. Burnum-Johnson, Lynne A. Goodwin, Richard D. Smith, 2013 .

Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens

Paul D Piehowski, Samuel O Purvine, Carrie D Nicora, 2012, The ISME Journal.

The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefs

R. Preziosi, J. Eisen, A. Altieri, 2022, Communications Biology.

Microbial diversity declines in warmed tropical soil and respiration rise exceed predictions as communities adapt

P. Meir, K. Saltonstall, E. Bååth, 2022, Nature Microbiology.

Community-led, integrated, reproducible multi-omics with anvi’o

Daniel J. Blankenberg, Ryan M. Moore, Elaina D. Graham, 2020, Nature Microbiology.

Bacterial Protection of Beetle-Fungus Mutualism

D. Oh, J. Clardy, K. Klepzig, 2008, Science.

Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens

Kristin E. Burnum-Johnson, Lynne A. Goodwin, Richard D. Smith, 2013, Applied and Environmental Microbiology.

Baleen whales host a unique gut microbiome with similarities to both carnivores and herbivores

P. Girguis, J. McCarthy, J. Sanders, 2015, Nature Communications.

Microbial Iron Mats at the Mid-Atlantic Ridge and Evidence that Zetaproteobacteria May Be Restricted to Iron-Oxidizing Marine Systems

G. Luther, D. Emerson, J. Breier, 2015, PloS one.

Microbial Community Structure of Leaf-Cutter Ant Fungus Gardens and Refuse Dumps

G. Suen, C. Currie, T. Balser, 2010, PloS one.

Monoculture of Leafcutter Ant Gardens

U. Mueller, A. Rodrigues, J. Scott, 2010, PloS one.

A genus definition for Bacteria and Archaea based on genome relatedness and taxonomic affiliation

K. Nealson, G. Garrity, D. Emerson, 2018, bioRxiv.

Contrasting drivers of abundant phage and prokaryotic communities in tropical, coastal ecosystems across the Isthmus of Panama

F. Aylward, M. Leray, J. Scott, 2023, bioRxiv.

Biological rejuvenation of iron oxides in bioturbated marine sediments

F. Meysman, C. Chan, J. P. Beam, 2018, The ISME Journal.

Rapid ecosystem-scale consequences of acute deoxygenation on a Caribbean coral reef

A. Altieri, M. Leray, J. Scott, 2021, Nature Communications.

Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen. nov., sp. nov.

C. Moyer, D. Emerson, K. Küsel, 2017, The ISME Journal.

The Microbiome of Leaf‐Cutter Ant Fungus Gardens

G. Suen, F. Aylward, C. Currie, 2011 .

A phylogenetic analysis of the phylum Fibrobacteres.

G. Suen, J. Scott, S. M. Adams, 2013, Systematic and applied microbiology.

Agricultural Systems of Insects Convergent Bacterial Microbiotas in the Fungal 2014

S. Tringe, G. Suen, S. Malfatti, 2014 .

Bionectriol A, a polyketide glycoside from the fungus Bionectria sp. associated with the fungus-growing ant, Apterostigma dentigerum.

D. Oh, J. Clardy, C. Currie, 2009, Tetrahedron letters.

Lecture Series Support Materials & Additional Resources

Dong-Chan Oh, Kier D. Klepzig, Jon Clardy, 2008 .

Deep-Sea Research Part In situ estimates of iron-oxidation and accretion rates for iron-oxidizing bacterial mats at L ō ’ ihi Seamount

D. Emerson, J. Scott, Craig, 2017 .

Bringing microbial diversity into focus: high‐resolution analysis of iron mats from the Lō‘ihi Seamount

B. Glazer, D. Emerson, J. Scott, 2017, Environmental microbiology.

In situ estimates of iron-oxidation and accretion rates for iron-oxidizing bacterial mats at Lō’ihi Seamount

C. Moyer, D. Emerson, J. Scott, 2016, bioRxiv.

The gut microbiome stability of a butterflyfish is disrupted on severely degraded Caribbean coral reefs

R. Preziosi, J. Eisen, A. Altieri, 2020, bioRxiv.

Intestinal microbes: an axis of functional diversity among large marine consumers

D. Burkepile, D. Rasher, J. Scott, 2020, Proceedings of the Royal Society B.

Biogeography of mutualistic fungi cultivated by leafcutter ants

U. Mueller, T. Schultz, M. Bollazzi, 2017, Molecular ecology.

Polymorphic microsatellite markers for the symbiotic fungi cultivated by leaf cutter ants (Attini, Formicidae)

U. Mueller, J. Scott, Michael Cooper, 2009, Molecular ecology resources.

A biological source of marine sedimentary iron oxides

F. Meysman, C. Chan, J. P. Beam, 2017, bioRxiv.

Unique Honey Bee (Apis mellifera) Hive Component-Based Communities as Detected by a Hybrid of Phospholipid Fatty-Acid and Fatty-Acid Methyl Ester Analyses

C. Currie, T. Balser, J. Scott, 2015, PloS one.

Baleen whales host a unique gut microbiome with similarities to both carnivores and herbivores

P. Girguis, J. McCarthy, J. Sanders, 2015, Nature Communications.

Correction: Unique Honey Bee (Apis mellifera) Hive Component-Based Communities as Detected by a Hybrid of Phospholipid Fatty-Acid and Fatty-Acid Methyl Ester Analyses

C. Currie, T. Balser, J. Scott, 2015, PloS one.

2.2. Publications by Full-Time Academic Staff in Refereed Journals, Books and Conference Proceedings (2011)

Brian R Johnson, Joseph G. Laird, M. C. Murphy, 2011 .

A Genus Definition for Bacteria and Archaea Based on a Standard Genome Relatedness Index

K. Nealson, G. Garrity, J. Amend, 2020, mBio.

Contrasting drivers of abundant phage and prokaryotic communities revealed in diverse coastal ecosystems

F. Aylward, M. Leray, J. Scott, 2023, ISME communications.

ScholarWorks @ UTRGV ScholarWorks @ UTRGV

J. Breier, J. Scott, George W. Luther, 2022 .