Dexi Bi

发表

Conjugative Transfer of the pVA1-Type Plasmid Carrying the pirABvp Genes Results in the Formation of New AHPND-Causing Vibrio

Xuepeng Wang, Wenchao Wang, Xuan Dong, 2019, Front. Cell. Infect. Microbiol..

Prediction of Type II Toxin-Antitoxin Loci in Klebsiella pneumoniae Genome Sequences

Dong-Qing Wei, Hong-Yu Ou, Dongqing Wei, 2015, Interdisciplinary Sciences: Computational Life Sciences.

Complete Genome Sequence of Klebsiella pneumoniae subsp. pneumoniae HS11286, a Multidrug-Resistant Strain Isolated from Human Sputum

Z. Deng, Hong-Yu Ou, K. Rajakumar, 2012, Journal of bacteriology.

Mapping the resistance-associated mobilome of a carbapenem-resistant Klebsiella pneumoniae strain reveals insights into factors shaping these regions and facilitates generation of a 'resistance-disarmed' model organism.

Zixin Deng, Dexi Bi, Cui Tai, 2015, The Journal of antimicrobial chemotherapy.

ThioFinder: A Web-Based Tool for the Identification of Thiopeptide Gene Clusters in DNA Sequences

Z. Deng, Hong-Yu Ou, L. Duan, 2012, PloS one.

Profiling Fusobacterium infection at high taxonomic resolution reveals lineage-specific correlations in colorectal cancer

H. Qin, Hao Li, Dexi Bi, 2022, Nature Communications.

HNF-4α downregulation promotes tumor migration and invasion by regulating E-cadherin in renal cell carcinoma

Dexi Bi, Fen Wang, Jing Guo, 2019, Oncology reports.

Follicular fluid metabolome and cytokinome profiles in poor ovarian responders and the impact of dehydroepiandrosterone supplementation

J. Chan, Yie Hou Lee, Dexi Bi, 2020, bioRxiv.

Conjugative Transfer of Acute Hepatopancreatic Necrosis Disease-Causing pVA1-Type Plasmid Is Mediated by a Novel Self-Encoded Type IV Secretion System

Xuan Dong, Jipeng Song, Dexi Bi, 2022, Microbiology spectrum.

Fusobacterium nucleatum enhances the efficacy of PD-L1 blockade in colorectal cancer

H. Qin, Jue-min Fang, Xianling Guo, 2021, Signal Transduction and Targeted Therapy.

Use of peripheral lymphocytes and support vector machine for survival prediction in breast cancer patients

P. Zhang, Dexi Bi, Yunshu Lu, 2018, Translational Cancer Research.

Ketogenic diet for human diseases: the underlying mechanisms and potential for clinical implementations

H. Qin, C. Kong, Dexi Bi, 2022, Signal Transduction and Targeted Therapy.

ICEberg 2.0: an updated database of bacterial integrative and conjugative elements

Meng Liu, Xiaobin Li, Zixin Deng, 2018, Nucleic Acids Res..

pirABvp-Bearing Vibrio parahaemolyticus and Vibrio campbellii Pathogens Isolated from the Same AHPND-Affected Pond Possess Highly Similar Pathogenic Plasmids

Qian Yang, Wenchao Wang, Xuan Dong, 2017, Front. Microbiol..

ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria

Zhen Xu, Shiru Jia, Zixin Deng, 2011, Nucleic Acids Res..

Integrin α5 subunit is required for the tumor supportive role of fibroblasts in colorectal adenocarcinoma and serves as a potential stroma prognostic marker

H. Qin, Dexi Bi, Youhua Zhang, 2019, Molecular oncology.

Fecal microbiota transplantation improves VPA-induced ASD mice by modulating the serotonergic and glutamatergic synapse signaling pathways

Chunyan Wu, Linsheng Huang, Dexi Bi, 2023, Translational Psychiatry.

Digital PCR quantification of DNA, RNA and extracellular microRNA of mouse oocytes

Yie Hou Lee, Dexi Bi, Xinyue Zhao, 2021, bioRxiv.

Hepatocyte nuclear factor HNF1A is a potential regulator in shaping the super‐enhancer landscape in colorectal cancer liver metastasis

Xiaoting Zhang, H. Qin, Dexi Bi, 2021, FEBS letters.

TADB: a web-based resource for Type 2 toxin–antitoxin loci in bacteria and archaea

Zixin Deng, Dexi Bi, Ewan M. Harrison, 2010, Nucleic Acids Res..

A newly developed PCR‐based method revealed distinct Fusobacterium nucleatum subspecies infection patterns in colorectal cancer

H. Qin, Hao Li, Dexi Bi, 2021, Microbial biotechnology.

Mast cells inhibit colorectal cancer development by inducing ER stress through secreting Cystatin C

Dexi Bi, Jiyu Li, Youhua Zhang, 2022, Oncogene.

Overexpression of GAS6 Promotes Cell Proliferation and Invasion in Bladder Cancer by Activation of the PI3K/AKT Pathway

Dexi Bi, Yuan Wu, Yang Yan, 2020, OncoTargets and therapy.

SecReT4: a web-based bacterial type IV secretion system resource

Zixin Deng, Dexi Bi, Cui Tai, 2012, Nucleic Acids Res..

Integrated microbiome and metabolome analysis reveals a novel interplay between commensal bacteria and metabolites in colorectal cancer

Xinxiang Li, Yongzhi Yang, Yanlei Ma, 2019, Theranostics.

Assessment of the Xpert MTB/RIF Ultra assay on rapid diagnosis of extrapulmonary tuberculosis.

Dexi Bi, Yinjuan Guo, F. Yu, 2019, International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases.

Comparative Analysis of AbaR-Type Genomic Islands Reveals Distinct Patterns of Genetic Features in Elements with Different Backbones

Hong-Yu Ou, H. Qin, Dexi Bi, 2020, mSphere.

Large-Scale Identification of AbaR-Type Genomic Islands in Acinetobacter baumannii Reveals Diverse Insertion Sites and Clonal Lineage-Specific Antimicrobial Resistance Gene Profiles

Hong-Yu Ou, Dexi Bi, Ru-ting Xie, 2019, Antimicrobial Agents and Chemotherapy.

A Site-Specific Integrative Plasmid Found in Pseudomonas aeruginosa Clinical Isolate HS87 along with A Plasmid Carrying an Aminoglycoside-Resistant Gene

Shiru Jia, Jie Zhang, Zixin Deng, 2016, PloS one.

In Silico Typing and Comparative Genomic Analysis of IncFIIK Plasmids and Insights into the Evolution of Replicons, Plasmid Backbones, and Resistance Determinant Profiles

Hong-Yu Ou, Dexi Bi, Jun-jie Li, 2018, Antimicrobial Agents and Chemotherapy.

First Report of a Clinical, Multidrug-Resistant Enterobacteriaceae Isolate Coharboring Fosfomycin Resistance Gene fosA3 and Carbapenemase Gene blaKPC-2 on the Same Transposon, Tn1721

Hong-Yu Ou, K. Rajakumar, Ying Zhang, 2014, Antimicrobial Agents and Chemotherapy.

Toward automatic prediction of EGFR mutation status in pulmonary adenocarcinoma with 3D deep learning

Bingbing Ni, Wei Zhao, Peijun Wang, 2019, Cancer medicine.

Dehydroepiandrosterone supplementation and the impact of follicular fluid metabolome and cytokinome profiles in poor ovarian responders

J. Chan, Yie Hou Lee, Dexi Bi, 2022, Journal of Ovarian Research.

In Silico Typing and Comparative Genomic Analysis of IncFIIK Plasmids and Insights into the Evolution of Replicons, Plasmid Backbones, and Resistance Determinant Profiles

Hong-Yu Ou, Dexi Bi, Jun-jie Li, 2018, Antimicrobial Agents and Chemotherapy.