Natsuko Goda

发表

Discovery of Potent Disheveled/Dvl Inhibitors Using Virtual Screening Optimized With NMR-Based Docking Performance Index

H. Hiroaki, Kiminori Hori, Kasumi Ajioka, 2018, Front. Pharmacol..

Accidental Interaction between PDZ Domains and Diclofenac Revealed by NMR-Assisted Virtual Screening

M. Ota, K. Kinoshita, H. Hiroaki, 2013, Molecules.

Intracellular protein delivery activity of peptides derived from insulin-like growth factor binding proteins 3 and 5.

M. Shirakawa, H. Hiroaki, Toshiki Tanaka, 2008, Experimental cell research.

LBT/PTD dual tagged vector for purification, cellular protein delivery and visualization in living cells.

M. Shirakawa, H. Hiroaki, Natsuko Goda, 2007, Biochimica et biophysica acta.

Using 1HN amide temperature coefficients to define intrinsically disordered regions: An alternative NMR method

M. Ota, H. Hiroaki, Natsuko Goda, 2018, Protein science : a publication of the Protein Society.

Discovery of Cryoprotective Activity in Human Genome-Derived Intrinsically Disordered Proteins

M. Ota, S. Fukuchi, H. Hiroaki, 2018, International journal of molecular sciences.

A Method for Systematic Assessment of Intrinsically Disordered Protein Regions by NMR

M. Ota, T. Ikegami, H. Hiroaki, 2015, International journal of molecular sciences.

Opposing Effect of Naringenin and Quercetin on the Junctional Compartment of MDCK II Cells to Modulate the Tight Junction

H. Hiroaki, Natsuko Goda, T. Tenno, 2020, Nutrients.

An optimized Npro-based method for the expression and purification of intrinsically disordered proteins for an NMR study

M. Ota, S. Fukuchi, Y. Ishino, 2015, Intrinsically disordered proteins.

Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition.

M. Shirakawa, J. Jee, Hideki Kobayashi, 2005, Structure.

Presence of intrinsically disordered proteins can inhibit the nucleation phase of amyloid fibril formation of Aβ(1–42) in amino acid sequence independent manner

H. Hiroaki, Shota Suzuki, Natsuko Goda, 2020, Scientific Reports.

Crystallographic characterization of the N-terminal domain of PEX1.

Y. Akiyama, M. Shirakawa, K. Tomii, 2004, Acta crystallographica. Section D, Biological crystallography.

A cryptic phosphate-binding pocket on the SPFH domain of human stomatin that regulates a novel fibril-like self-assembly

H. Hiroaki, Shota Suzuki, Natsuko Goda, 2022, Current research in structural biology.

High dose of baicalin or baicalein can reduce tight junction integrity by partly targeting the first PDZ domain of zonula occludens-1 (ZO-1).

H. Hiroaki, Natsuko Goda, T. Tenno, 2020, European journal of pharmacology.

A Common Substrate Recognition Mode Conserved between Katanin p60 and VPS4 Governs Microtubule Severing and Membrane Skeleton Reorganization*

T. Ikegami, M. Shirakawa, H. Tochio, 2010, The Journal of Biological Chemistry.

Effect of Ca2+ on the microtubule‐severing enzyme p60‐katanin. Insight into the substrate‐dependent activation mechanism

M. Shirakawa, T. Ikura, H. Hiroaki, 2012, The FEBS journal.

Insight into the substrate-dependent activation mechanism

M. Shirakawa, T. Ikura, H. Hiroaki, 2012 .

Fine-tuning of protein domain boundary by minimizing potential coiled coil regions

M. Shirakawa, K. Tomii, H. Tochio, 2006, Journal of biomolecular NMR.

The common phospholipid‐binding activity of the N‐terminal domains of PEX1 and VCP/p97

K. Mizuguchi, M. Shirakawa, Toshiyuki Shimizu, 2006, The FEBS journal.

Structural characterization of the MIT domain from human Vps4b.

M. Shirakawa, J. Jee, H. Tochio, 2005, Biochemical and biophysical research communications.

Structure of the N-terminal Domain of PEX1 AAA-ATPase

Yutaka Akiyama, Hidekazu Hiroaki, Kentaro Tomii, 2004, Journal of Biological Chemistry.

Structure and Function of the N-terminal Nucleolin Binding Domain of Nuclear Valosin-containing Protein-like 2 (NVL2) Harboring a Nucleolar Localization Signal*

M. Shirakawa, H. Hiroaki, K. Fujiwara, 2011, The Journal of Biological Chemistry.

NMR-Guided Repositioning of Non-Steroidal Anti-Inflammatory Drugs into Tight Junction Modulators

H. Hiroaki, Natsuko Goda, T. Tenno, 2021, International journal of molecular sciences.

Nuclear magnetic resonance evidence for the dimer formation of beta amyloid peptide 1-42 in 1,1,1,3,3,3-hexafluoro-2-propanol.

H. Hiroaki, A. Narita, M. Hoshi, 2016, Analytical biochemistry.

Na, K-ATPase α3 is a death target of Alzheimer patient amyloid-β assembly

M. Hagiwara, A. Kakita, D. Teplow, 2015, Proceedings of the National Academy of Sciences.

The PRESAT‐vector: Asymmetric T‐vector for high‐throughput screening of soluble protein domains for structural proteomics

M. Shirakawa, H. Hiroaki, Natsuko Goda, 2004, Protein science : a publication of the Protein Society.

Pharmacologic Comparison of High-Dose Hesperetin and Quercetin on MDCK II Cell Viability, Tight Junction Integrity, and Cell Shape

H. Hiroaki, Natsuko Goda, T. Tenno, 2023, Antioxidants.

Spatial Overlap of Claudin- and Phosphatidylinositol Phosphate-Binding Sites on the First PDZ Domain of Zonula Occludens 1 Studied by NMR

T. Ikegami, H. Hiroaki, D. Hamada, 2018, Molecules.

1H, 13C, and 15N resonance assignment of the first PDZ domain of mouse ZO-1

T. Ikegami, H. Hiroaki, M. Furuse, 2011, Biomolecular NMR assignments.

Direct inhibition of the first PDZ domain of ZO-1 by glycyrrhizin is a possible mechanism of tight junction opening of Caco-2 cells.

H. Hiroaki, Natsuko Goda, T. Tenno, 2022, Food & function.

Multiple Interactions of the Intrinsically Disordered Region between the Helicase and Nuclease Domains of the Archaeal Hef Protein*

Tetsuya Mori, T. Ando, N. Kodera, 2014, The Journal of Biological Chemistry.

Structural difference of vasoactive intestinal peptide in two distinct membrane-mimicking environments.

T. Ikegami, M. Shirakawa, H. Hiroaki, 2011, Biochimica et biophysica acta.

MIT domain of Vps4 is a Ca2+-dependent phosphoinositide-binding domain.

M. Shirakawa, H. Hiroaki, D. Hamada, 2013, Journal of biochemistry.

Principal component analysis of data from NMR titration experiment of uniformly 15N labeled amyloid beta (1-42) peptide with osmolytes and phenolic compounds.

H. Hiroaki, A. Narita, M. Hoshi, 2020, Archives of biochemistry and biophysics.

Cryoprotective activities of FK20, a human genome-derived intrinsically disordered peptide against cryosensitive enzymes without a stereospecific molecular interaction

H. Hiroaki, Natsuko Goda, T. Tenno, 2021, PeerJ Physical Chemistry.

Crystal structure of afadin PDZ domain–nectin‐3 complex shows the structural plasticity of the ligand‐binding site

M. Oda, A. Nakagawa, Mamoru Suzuki, 2015, Protein science : a publication of the Protein Society.

High-throughput construction method for expression vector of peptides for NMR study suited for isotopic labeling.

H. Hayashi, M. Shirakawa, H. Tochio, 2004, Protein engineering, design & selection : PEDS.

Na, K-ATPase α3 is a death target of Alzheimer patient amyloid-β assembly

M. Hagiwara, A. Kakita, D. Teplow, 2015, Proceedings of the National Academy of Sciences.

Structure of the N-terminal domain of PEX1 AAA-ATPase. Characterization of a putative adaptor-binding domain.

Yutaka Akiyama, Hidekazu Hiroaki, Kentaro Tomii, 2005, The Journal of biological chemistry.