Benoit Morel

ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

Alexey M. Kozlov, A. Stamatakis, D. Posada, 2019, bioRxiv.

Optimal Data Distribution for Phylogenetic Inference with Site Repeats via Hypergraph Partitioning

A. Stamatakis, Sebastian Schlag, Benoit Morel, 2018 .

Are fleas highly modified Mecoptera? Phylogenomic resolution of Antliophora (Insecta: Holometabola)

Alexey M. Kozlov, R. Beutel, B. Misof, 2020, bioRxiv.

Asteroid: a new minimum balanced evolution supertree algorithm robust to missing data

A. Stamatakis, T. Williams, Benoit Morel, 2022, bioRxiv.

GeneRax: A Tool for Species-Tree-Aware Maximum Likelihood-Based Gene Family Tree Inference under Gene Duplication, Transfer, and Loss

Alexey M. Kozlov, A. Stamatakis, G. Szöllősi, 2020, Molecular biology and evolution.

RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

Alexey M. Kozlov, Alexandros Stamatakis, Benoit Morel, 2018, bioRxiv.

RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

Alexey M. Kozlov, Alexandros Stamatakis, Benoit Morel, 2019, Bioinform..

ParGenes: a tool for massively parallel model selection and phylogenetic tree inference on thousands of genes

Alexey M. Kozlov, Alexandros Stamatakis, Benoit Morel, 2018, bioRxiv.

SpeciesRax: A Tool for Maximum Likelihood Species Tree Inference from Gene Family Trees under Duplication, Transfer, and Loss

A. Stamatakis, T. Williams, G. Szöllősi, 2021, bioRxiv.

Phylogenetic Analysis of SARS-CoV-2 Data Is Difficult

Benoit Morel, Alexey M. Kozlov, Alexandros Stamatakis, 2020, bioRxiv.

EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences

Benoit Morel, Alexey M. Kozlov, Alexandros Stamatakis, 2018, bioRxiv.

NetRAX: accurate and fast maximum likelihood phylogenetic network inference

Alexey M. Kozlov, A. Stamatakis, Céline Scornavacca, 2021, bioRxiv.

Photoreceptor Diversification Accompanies the Evolution of Anthozoa

A. Stamatakis, N. Foulkes, Benoit Morel, 2020, Molecular biology and evolution.

The power and limitations of species tree-aware phylogenetics

Adrián A. Davín, A. Spang, A. Stamatakis, 2023, bioRxiv.

An evolutionary timescale for Bacteria calibrated using the Great Oxidation Event

James W. Clark, Adrián A. Davín, A. Spang, 2023, bioRxiv.

A Novel Heuristic for Data Distribution in Massively Parallel Phylogenetic Inference Using Site Repeats

Alexandros Stamatakis, Benoit Morel, Tomás Flouri, 2017, 2017 IEEE 19th International Conference on High Performance Computing and Communications; IEEE 15th International Conference on Smart City; IEEE 3rd International Conference on Data Science and Systems (HPCC/SmartCity/DSS).

AleRax: A tool for gene and species tree co-estimation and reconciliation under a probabilistic model of gene duplication, transfer, and loss

G. Szöllősi, Benoit Morel, Tom A. Williams, 2023, bioRxiv.

GeneRax: A tool for species tree-aware maximum likelihood based gene tree inference under gene duplication, transfer, and loss

Benoit Morel, Alexey M. Kozlov, Alexandros Stamatakis, 2019, bioRxiv.