Takashi Hirano

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Advantages of genome sequencing by long-read sequencer using SMRT technology in medical area

Akino Shiroma, Kazuma Nakano, Makiko Shimoji, 2017, Human Cell.

The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome

Hiroaki Sakai, Takeshi Itoh, Yu Takahashi, 2015, Scientific Reports.

Molecular epidemiology of multidrug-resistant Acinetobacter baumannii isolates in a university hospital in Nepal reveals the emergence of a novel epidemic clonal lineage.

T. Kirikae, T. Miyoshi‐Akiyama, Akino Shiroma, 2015, International journal of antimicrobial agents.

Complete Genome Sequences of Low-Passage Virulent and High-Passage Avirulent Variants of Pathogenic Leptospira interrogans Serovar Manilae Strain UP-MMC-NIID, Originally Isolated from a Patient with Severe Leptospirosis, Determined Using PacBio Single-Molecule Real-Time Technology

Yasunobu Terabayashi, Akino Shiroma, Toshihiko Suzuki, 2015, Genome Announcements.

The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome

T. Itoh, H. Sakai, K. Naito, 2015, bioRxiv.

Pseudomonas aeruginosa Clinical Isolates in Nepal Coproducing Metallo-β-Lactamases and 16S rRNA Methyltransferases

T. Kirikae, K. Satou, Takashi Hirano, 2017, Antimicrobial Agents and Chemotherapy.

Digital Image Analysis of Genomic DNA Abnormalities in Cancer

Takashi Hirano, T. Shin-ichi, G. Yanagimoto, 2002 .

Helicobacter pylori genomes reveal Paleolithic human migration to the east end of Asia

N. Saitou, M. Asaka, Mototsugu Kato, 2022, iScience.

Complete Genome Sequence of Lactococcus cremoris Strain 7-1, a Lactic Acid Bacterium Isolated from a Traditional Mongolian Milk Product Possessing Mucin-Adhesive Ability

H. Sakai, Kazuma Nakano, Hinako Tamotsu, 2022, Microbiology resource announcements.

Complete Genome Sequence of the Intracellular Bacterial Symbiont TC1 in the Anaerobic Ciliate Trimyema compressum

Y. Kamagata, N. Nikoh, Wen-Tso Liu, 2016, Genome Announcements.

Identification of the Fluvirucin B2 (Sch 38518) Biosynthetic Gene Cluster from Actinomadura fulva subsp. indica ATCC 53714: substrate Specificity of the β-Amino Acid Selective Adenylating Enzyme FlvN

J. Hashimoto, K. Shin‐ya, T. Eguchi, 2016, Bioscience, biotechnology, and biochemistry.

Biosynthesis of Versipelostatin: Identification of an Enzyme-Catalyzed [4+2]-Cycloaddition Required for Macrocyclization of Spirotetronate-Containing Polyketides

M. Nishiyama, T. Hashimoto, J. Hashimoto, 2014, Journal of the American Chemical Society.

First Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhimurium Strain ATCC 13311 (NCTC 74), a Reference Strain of Multidrug Resistance, as Achieved by Use of PacBio Single-Molecule Real-Time Technology

Yasunobu Terabayashi, Akino Shiroma, Kazuma Nakano, 2014, Genome Announcements.

Complete Genome Sequence of Lactobacillus paracasei EG9, a Strain Accelerating Free Amino Acid Production during Cheese Ripening

Akino Shiroma, Kazuma Nakano, Makiko Shimoji, 2018, Genome Announcements.

First successful amplification of 18S ribosomal DNA ofCordyceps spp. by the PCR method

Yuko Ito, Takashi Hirano, 1996 .

Genome sequence of 12 Vigna species as a knowledge base of stress tolerance and resistance

H. Sakai, M. Hasebe, A. Nagano, 2022, bioRxiv.

Heterogeneous composition of key metabolic gene clusters in a vent mussel symbiont population

T. Maruyama, Koji Inoue, Y. Takaki, 2015, The ISME Journal.

Genetic factor for twisting legume pods identified by fine-mapping of shattering-related traits in azuki bean and yard-long bean

H. Sakai, M. Kumagai, K. Naito, 2019, bioRxiv.

Comparative Genome Analysis Between Aspergillus oryzae Strains Reveals Close Relationship Between Sites of Mutation Localization and Regions of Highly Divergent Genes among Aspergillus Species

Y. Kawarabayasi, H. Koike, K. Fujimori, 2012, DNA Research.

Past and present on the genome analysis for bovine genetic disease

Takashi Hirano, 2011 .

Complete genome sequence of a methicillin-resistant Staphylococcus lugdunensis strain and characteristics of its staphylococcal cassette chromosome mec

T. Kirikae, T. Baba, K. Hiramatsu, 2020, Scientific Reports.

First Complete Genome Sequences of Staphylococcus aureus subsp. aureus Rosenbach 1884 (DSM 20231T), Determined by PacBio Single-Molecule Real-Time Technology

Yasunobu Terabayashi, Akino Shiroma, Kazuma Nakano, 2015, Genome Announcements.

A Group I Intron in the 18S Ribosomal DNA from the Parasitic Fungus Isaria japonica

Yuko Ito, Takashi Hirano, 1999, Journal of Molecular Evolution.

Complete Genome Sequence of Lactobacillus plantarum Strain LQ80, Selected for Preparation of Fermented Liquid Feed for Pigs

Akino Shiroma, Yimin Cai, Kazuma Nakano, 2018, Genome Announcements.

Isolation and genomic characterization of a Dehalococcoides strain suggests genomic rearrangement during culture

M. Yohda, Akino Shiroma, Kazuma Nakano, 2017, Scientific Reports.

Genome sequence determination and metagenomic characterization of a Dehalococcoides mixed culture grown on cis-1,2-dichloroethene.

M. Yohda, Yasunobu Terabayashi, M. Sunairi, 2015, Journal of bioscience and bioengineering.

Complete Genome Sequence of Petrimonas sp. Strain IBARAKI, Assembled from the Metagenome Data of a Culture Containing Dehalococcoides spp.

M. Yohda, Akino Shiroma, Kazuma Nakano, 2018, Genome Announcements.

First Complete Genome Sequence of the Skin-Improving Lactobacillus curvatus Strain FBA2, Isolated from Fermented Vegetables, Determined by PacBio Single-Molecule Real-Time Technology

Akino Shiroma, Kazuma Nakano, Makiko Shimoji, 2016, Genome Announcements.

A Carbapenem-Resistant Pseudomonas aeruginosa Isolate Harboring Two Copies of blaIMP-34 Encoding a Metallo-β-Lactamase

T. Kirikae, T. Miyoshi‐Akiyama, Akino Shiroma, 2016, PloS one.

Same Locus for Non-shattering Seed Pod in Two Independently Domesticated Legumes, Vigna angularis and Vigna unguiculata

H. Sakai, M. Kumagai, K. Naito, 2020, Frontiers in Genetics.

Genome-wide mutation analysis of Helicobacter pylori after inoculation to Mongolian gerbils

Y. Yamaoka, J. Akada, Akino Shiroma, 2019, Gut Pathogens.

Complete Genome Sequences of Eight Helicobacter pylori Strains with Different Virulence Factor Genotypes and Methylation Profiles, Isolated from Patients with Diverse Gastrointestinal Diseases on Okinawa Island, Japan, Determined Using PacBio Single-Molecule Real-Time Technology

Misako Aoyama, Yoshio Yamaoka, Kazuhito Satou, 2014, Genome Announcements.

Complete Genome Sequence of Lactococcus lactis subsp. lactis G50 with Immunostimulating Activity, Isolated from Napier Grass

Akino Shiroma, Kazuma Nakano, Makiko Shimoji, 2016, Genome Announcements.

Complete annotated genome sequence of Mycobacterium tuberculosis (Zopf) Lehmann and Neumann (ATCC35812) (Kurono).

T. Kirikae, T. Miyoshi‐Akiyama, Akino Shiroma, 2015, Tuberculosis.