Kangning Dong

发表

Joint reconstruction of cis-regulatory interaction networks across multiple tissues using single-cell chromatin accessibility data

Shihua Zhang, Kangning Dong, 2020, Briefings in bioinformatics.

STAMarker: determining spatial domain-specific variable genes with saliency maps in deep learning

Chihao Zhang, Kangning Dong, Luonan Chen, 2022, bioRxiv.

Deciphering the Spatial Modular Patterns of Tissues by Integrating Spatial and Single-Cell Transcriptomic Data

Wei Zhou, Kangning Dong, Jinyu Chen, 2022, J. Comput. Biol..

Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages

Kangning Dong, Shihua Zhang, Xiang Zhou, 2022, bioRxiv.

Deciphering spatial domains from spatially resolved transcriptomics with an adaptive graph attention auto-encoder

Shihua Zhang, Kangning Dong, 2021, Nature Communications.

Network diffusion for scalable embedding of massive single-cell ATAC-seq data

Shihua Zhang, Kangning Dong, 2021, bioRxiv.

SmartGate is a spatial metabolomics tool for resolving tissue structures

Kangning Dong, Yu Wang, Shihua Zhang, 2022, bioRxiv.

Joint reconstruction of cis-regulatory interaction networks across multiple tissues using single-cell chromatin accessibility data

Shihua Zhang, Kangning Dong, Shihua Zhang, 2019, bioRxiv.

Spatiotemporal transcriptomic atlas reveals the dynamic characteristics and key regulators of planarian regeneration

Ying Yang, Yong-Liang Zhao, Kangning Dong, 2023, Nature communications.

Uncovering topologically associating domains from three-dimensional genome maps with TADGATE

Kangning Dong, Dachang Dang, Ran Duan, 2024, bioRxiv.

High-density generation of spatial transcriptomics with STAGE

Kangning Dong, Kuo Gai, Shang Li, 2024, Nucleic acids research.