G. Athreya

发表

Deciphering Human Immunodeficiency Virus Type 1 Transmission and Early Envelope Diversification by Single-Genome Amplification and Sequencing

B. Korber, B. Haynes, P. Sharp, 2008, Journal of Virology.

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

Hui Li, Tanmoy Bhattacharya, Xiping Wei, 2008, Proceedings of the National Academy of Sciences.

Modeling sequence evolution in acute HIV-1 infection.

Tanmoy Bhattacharya, Michael S Saag, Brian Gaschen, 2009, Journal of theoretical biology.

Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection

Ethan Romero-Severson, Bette Korber, Hui Li, 2018, Nature Communications.

Unequal Evolutionary Rates in the Human Immunodeficiency Virus Type 1 (HIV-1) Pandemic: the Evolutionary Rate of HIV-1 Slows Down When the Epidemic Rate Increases

Gayathri Athreya, William Bruno, Moulik Kothari, 2007, Journal of Virology.

Quantitating the Multiplicity of Infection with Human Immunodeficiency Virus Type 1 Subtype C Reveals a Non-Poisson Distribution of Transmitted Variants

R. Swanstrom, H. Chu, B. Korber, 2009, Journal of Virology.

Quantitating the Multiplicity of Infection with Human Immunodeficiency Virus Type 1 Subtype C Reveals a Non-Poisson Distribution of Transmitted Variants

H. Chu, B. Korber, B. Haynes, 2009, Journal of Virology.

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets

B. Korber, P. Hraber, W. Fischer, 2013, BMC Bioinformatics.

Corrigendum to “Modeling sequence evolution in acute HIV-1 infection” [J. Theor. Biol. 261 (2009) 341–360]

Alan S. Perelson, Tanmoy Bhattacharya, Eric Delwart, 2012 .

Estimating time since infection in early homogeneous HIV-1 samples using a poisson model

Alan S. Perelson, Tanmoy Bhattacharya, Bette T. Korber, 2010, BMC Bioinformatics.

The evolutionary rate dynamically tracks changes in HIV-1 epidemics: application of a simple method for optimizing the evolutionary rate in phylogenetic trees with longitudinal data.

C. Kuiken, B. Korber, W. Bruno, 2009, Epidemics.

Unequal evolutionary rates in the HIV-1 pandemic: The evolutionary rate of HIV-1 1 slows down when the epidemic rate increases 2 3 Running title: Unequal evolutionary rates in the HIV-1 pandemic

W. Bruno, R. Ribeiro, T. Leitner, 2007 .

Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection

B. Korber, P. Hraber, B. Haynes, 2018, Nature Communications.

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets

Mohan Krishnamoorthy, Thomas Leitner, Peter T. Hraber, 2013, BMC Bioinformatics.