J. Barratt

发表

Detecting sequence variants in clinically important protozoan parasites.

Larissa Calarco, J. Barratt, J. Ellis, 2019, International journal for parasitology.

Genome Wide Identification of Mutational Hotspots in the Apicomplexan Parasite Neospora caninum and the Implications for Virulence

Larissa Calarco, J. Barratt, J. Ellis, 2018, Genome biology and evolution.

Detection of classic and cryptic Strongyloides genotypes by deep amplicon sequencing: A preliminary survey of dog and human specimens collected from remote Australian communities

J. Barratt, R. Bradbury, K. Ross, 2019, bioRxiv.

Improving the gene structure annotation of the apicomplexan parasite Neospora caninum fulfils a vital requirement towards an in silico-derived vaccine.

Paul J. Kennedy, Stephen J. Goodswen, J. Barratt, 2015, International journal for parasitology.

Importance of Nonenteric Protozoan Infections in Immunocompromised People

D. Stark, D. Marriott, J. Harkness, 2010, Clinical Microbiology Reviews.

The Transcriptome Sequence of Dientamoeba fragilis Offers New Biological Insights on its Metabolism, Kinome, Degradome and Potential Mechanisms of Pathogenicity.

D. Stark, J. Barratt, J. Ellis, 2015, Protist.

Detection of Dientamoeba fragilis in animal faeces using species specific real time PCR assay.

D. Stark, D. Marriott, J. Harkness, 2016, Veterinary parasitology.

Clinical Significance of Enteric Protozoa in the Immunosuppressed Human Population

D. Stark, S. V. van Hal, D. Marriott, 2009, Clinical Microbiology Reviews.

Malaria Risk and Prevention in Asian Migrants to Angola.

Dhruviben S. Patel, Eric S. Halsey, M. Pluciński, 2020, The American journal of tropical medicine and hygiene.

Dientamoeba fragilis, the Neglected Trichomonad of the Human Bowel

D. Stark, J. Barratt, J. Ellis, 2016, Clinical Microbiology Reviews.

Evaluation of various distance computation methods for construction of haplotype-based phylogenies from large MLST datasets

Mateusz M. Pluciński, Yueli Zheng, Y. Qvarnstrom, 2022, Molecular phylogenetics and evolution.

Investigation of US Cyclospora cayetanensis outbreaks in 2019 and evaluation of an improved Cyclospora genotyping system against 2019 cyclosporiasis outbreak clusters

S. Madison‐Antenucci, V. Cama, Y. Qvarnstrom, 2021, Epidemiology and Infection.

Evaluation of an ensemble-based distance statistic for clustering MLST datasets using epidemiologically defined clusters of cyclosporiasis

S. Madison‐Antenucci, Fernanda S. Nascimento, Y. Qvarnstrom, 2020, Epidemiology and Infection.

The complete coding region of the maxicircle as a superior phylogenetic marker for exploring evolutionary relationships between members of the Leishmaniinae.

D. Stark, J. Barratt, J. Ellis, 2019, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

The Prevalence of Angiostrongylus cantonensis/mackerrasae Complex in Molluscs from the Sydney Region

D. Stark, Rogan Lee, D. Marriott, 2015, PloS one.

Absence of human Bocavirus in bronchoalveolar lavage fluid of lung transplant patients.

D. Stark, D. Marriott, J. Harkness, 2009, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

Machine learning-based analyses support the existence of species complexes for Strongyloides fuelleborni and Strongyloides stercoralis

J. Barratt, Sarah G. H. Sapp, S. Sapp, 2020, Parasitology.

Machine learning and applications in microbiology

Paul J. Kennedy, Stephen J. Goodswen, Larissa Calarco, 2021, FEMS microbiology reviews.

The evolution of trypanosomatid taxonomy

D. Stark, J. Barratt, Alexa Kaufer, 2017, Parasites & Vectors.

Isolation of Novel Trypanosomatid, Zelonia australiensis sp. nov. (Kinetoplastida: Trypanosomatidae) Provides Support for a Gondwanan Origin of Dixenous Parasitism in the Leishmaniinae

D. Stark, Rogan Lee, D. Craig, 2017, PLoS neglected tropical diseases.

Angiostrongylus cantonensis: a review of its distribution, molecular biology and clinical significance as a human pathogen

D. Stark, Rogan Lee, D. Marriott, 2016, Parasitology.

A new subspecies of Trypanosoma cyclops found in the Australian terrestrial leech Chtonobdella bilineata

D. Stark, Rogan Lee, Z. Lun, 2021, Parasitology.

Limited genetic diversity among genotypes of Enterocytozoon bieneusi strains isolated from HIV-infected patients from Sydney, Australia.

D. Stark, S. V. van Hal, D. Marriott, 2009, Journal of medical microbiology.

Activity of benzimidazoles against Dientamoeba fragilis (Trichomonadida, Monocercomonadidae) in vitro and correlation of beta-tubulin sequences as an indicator of resistance

D. Stark, D. Marriott, J. Harkness, 2014, Parasite.

Sensitive universal detection of blood parasites by selective pathogen-DNA enrichment and deep amplicon sequencing

J. Barratt, R. Bradbury, Meredith Lane, 2021, Microbiome.

Genotyping genetically heterogeneous Cyclospora cayetanensis infections to complement epidemiological case linkage

Fernanda S. Nascimento, Y. Qvarnstrom, M. Pluciński, 2019, Parasitology.

Comparison of microscopy, culture, and conventional polymerase chain reaction for detection of blastocystis sp. in clinical stool samples.

D. Stark, J. Harkness, J. Barratt, 2011, The American journal of tropical medicine and hygiene.

A review of Dientamoeba fragilis carriage in humans: Several reasons why this organism should be considered in the diagnosis of gastrointestinal illness

D. Stark, D. Marriott, J. Harkness, 2011, Gut microbes.

Genotyping Cyclospora cayetanensis From Multiple Outbreak Clusters With An Emphasis on a Cluster Linked to Bagged Salad Mix—United States, 2020

V. Cama, Y. Qvarnstrom, J. Barratt, 2021, The Journal of infectious diseases.

Development of a workflow for identification of nuclear genotyping markers for Cyclospora cayetanensis

M. Borodovsky, A. Lomsadze, Fernanda S. Nascimento, 2020, Parasite.

Mitochondrial Junction Region as Genotyping Marker for Cyclospora cayetanensis

J. Barta, Fernanda S. Nascimento, Y. Qvarnstrom, 2019, Emerging infectious diseases.

The ambiguous life of Dientamoeba fragilis: the need to investigate current hypotheses on transmission

D. Stark, D. Marriott, J. Harkness, 2011, Parasitology.

Evaluation of Multiplex Tandem Real-Time PCR for Detection of Cryptosporidium spp., Dientamoeba fragilis, Entamoeba histolytica, and Giardia intestinalis in Clinical Stool Samples

D. Stark, D. Marriott, J. Harkness, 2010, Journal of Clinical Microbiology.

A case-controlled study of Dientamoeba fragilis infections in children

D. Stark, D. Marriott, J. Harkness, 2011, Parasitology.

Comparison of microscopy, two xenic culture techniques, conventional and real-time PCR for the detection of Dientamoeba fragilis in clinical stool samples

D. Stark, D. Marriott, J. Harkness, 2010, European Journal of Clinical Microbiology & Infectious Diseases.

A review of the clinical presentation of dientamoebiasis.

D. Stark, D. Marriott, J. Harkness, 2010, The American journal of tropical medicine and hygiene.

Mining the Genetic Diversity of the Pathogenic Protozoan, Neospora caninum

Larissa Calarco, J. Barratt, 2020 .

Newly defined conditions for the in vitro cultivation and cryopreservation of Dientamoeba fragilis: new techniques set to fast track molecular studies on this organism

D. Stark, D. Marriott, J. Harkness, 2010, Parasitology.

Repeated Dientamoeba fragilis infections: a case report of two families from Sydney, Australia

D. Stark, D. Marriott, J. Harkness, 2009, Infectious disease reports.

Restriction enzyme digestion of host DNA enhances universal detection of parasitic pathogens in blood via targeted amplicon deep sequencing

J. Barratt, M. Sheth, R. Bradbury, 2018, Microbiome.

Bulky Trichomonad Genomes: Encoding a Swiss Army Knife.

D. Stark, J. Barratt, J. Ellis, 2016, Trends in parasitology.

Nonparametric Binary Classification to Distinguish Closely Related versus Unrelated Plasmodium falciparum Parasites

M. Pluciński, J. Barratt, 2021, The American journal of tropical medicine and hygiene.

A global genotyping survey of Strongyloides stercoralis and Strongyloides fuelleborni using deep amplicon sequencing

B. Pritt, G. Verocai, F. Formenti, 2019, PLoS neglected tropical diseases.

Molecular Epidemiology of Imported Cases of Leishmaniasis in Australia from 2008 to 2014

D. Stark, Rogan Lee, D. Marriott, 2015, PloS one.

Application of a universal parasite diagnostic test to biological specimens collected from animals

M. Yabsley, Y. Qvarnstrom, J. Barratt, 2022, International Journal for Parasitology: Parasites and Wildlife.

Seroprevalence of Entamoeba histolytica infection among men who have sex with men in Sydney, Australia.

D. Stark, D. Marriott, J. Harkness, 2010, The American journal of tropical medicine and hygiene.

Genetic characterization of Strongyloides fuelleborni infecting free-roaming African vervets (Chlorocebus aethiops sabaeus) on the Caribbean island of St. Kitts

Y. Qvarnstrom, S. Mukaratirwa, J. Barratt, 2023, International journal for parasitology. Parasites and wildlife.

The development and evaluation of a nested PCR assay for detection of Neospora caninum and Hammondia heydorni in feral mouse tissues.

M. Reichel, J. Barratt, J. Ellis, 2008, Molecular and cellular probes.

The evolution of trypanosomatid taxonomy

D. Stark, J. Barratt, J. Ellis, 2017, Parasites & Vectors.

Assessing an Adaptation of the Universal Parasite Diagnostic Assay for Bloodborne Parasites in a US State Public Health Laboratory.

S. Madison‐Antenucci, Y. Qvarnstrom, J. Barratt, 2021, The American journal of tropical medicine and hygiene.

Description of Dientamoeba fragilis Cyst and Precystic Forms from Human Samples

D. Stark, D. Marriott, J. Harkness, 2014, Journal of Clinical Microbiology.

S0950268820001697jra 1..10

S. Madison‐Antenucci, Fernanda S. Nascimento, Y. Qvarnstrom, 2020 .

Clinical Significance and Phylogenetic Relationship of Novel Australian Pneumocystis jirovecii Genotypes

D. Stark, J. Harkness, W. Meyer, 2009, Journal of Clinical Microbiology.

Diversity profiling of xenic cultures of Dientamoeba fragilis following systematic antibiotic treatment and prospects for genome sequencing

D. Stark, J. Barratt, J. Ellis, 2019, Parasitology.