J. Sire

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The integumentary skeleton of tetrapods: origin, evolution, and development

M. Vickaryous, J. Sire, 2009, Journal of anatomy.

Phylotranscriptomic consolidation of the jawed vertebrate timetree

Frédéric Delsuc, Hervé Philippe, Iker Irisarri, 2017, Nature Ecology & Evolution.

Coupling Proteomics and Transcriptomics for the Identification of Novel and Variant Forms of Mollusk Shell Proteins: A Study with P. margaritifera

Arul Marie, L. Bédouet, J. Sire, 2011, Chembiochem : a European journal of chemical biology.

Sustained exercise improves vertebral histomorphometry and modulates hormonal levels in rainbow trout

L. Labbé, J. Sire, M. Fouchereau-Péron, 2009 .

Collagen Osteoid-Like Model Allows Kinetic Gene Expression Studies of Non-Collagenous Proteins in Relation with Mineral Development to Understand Bone Biomineralization

T. Azaïs, N. Nassif, C. Hélary, 2013, PloS one.

The mammalian Crx genes are highly divergent representatives of the Otx5 gene family, a gnathostome orthology class of orthodenticle-related homeogenes involved in the differentiation of retinal photoreceptors and circadian entrainment.

J. Plouhinec, T. Sauka-Spengler, A. Germot, 2003, Molecular biology and evolution.

Fine structure of regenerating scales and their associated cells in the cichlid Hemichromis bimaculatus (Gill)

J. Sire, J. Géraudie, 1984, Cell and Tissue Research.

Evolutionary and developmental origins of the vertebrate

P. Witten, J. Sire, 2009 .

Evolutionary and developmental origins of the vertebrate dentition

P. Witten, J. Sire, A. Huysseune, 2009, Journal of anatomy.

Evolution of dental tissue mineralization: an analysis of the jawed vertebrate SPARC and SPARC-L families

P. Simion, J. Sire, S. Ventéo, 2018, BMC Evolutionary Biology.

Evolutionary analysis of selective constraints identifies ameloblastin (AMBN) as a potential candidate for amelogenesis imperfecta

F. Delsuc, J. Sire, B. Gasse, 2015, BMC Evolutionary Biology.

Evolutionary Analysis Suggests That AMTN is Enamel-specific and a Candidate for AI

J. Sire, J. Silvent, B. Gasse, 2012, Journal of dental research.

From body scale ontogeny to species ontogeny: Histological and morphological assessment of the Late Devonian acanthodian Triazeugacanthus affinis from Miguasha, Canada

R. Cloutier, J. Sire, Marion Chevrinais, 2017, PloS one.

Evolutionary Analysis of Mammalian Enamelin, The Largest Enamel Protein, Supports a Crucial Role for the 32-kDa Peptide and Reveals Selective Adaptation in Rodents and Primates

J. Sire, S. Delgado, N. Al-Hashimi, 2009, Journal of Molecular Evolution.

Changes in vertebral structure during growth of reared rainbow trout, Oncorhynchus mykiss (Walbaum): a new approach using modelling of vertebral bone profiles.

L. Labbé, M. Girondot, J. Sire, 2009, Journal of fish diseases.

The Dentin Matrix Acidic Phosphoprotein 1 (DMP1) in the Light of Mammalian Evolution

J. Sire, J. Silvent, S. Delgado, 2013, Journal of Molecular Evolution.

Effect of an experimental oil spill on vertebral bone tissue quality in European sea bass (Dicentrarchus labrax L.).

J. Sire, H. Thomas-Guyon, A. Bado‐Nilles, 2011, Ecotoxicology and environmental safety.

The Origin and Evolution of Enamel Mineralization Genes

X. Gu, J. Sire, T. Davit-Béal, 2007, Cells Tissues Organs.

Light and TEM study of nonregenerated and experimentally regenerated scales of Lepisosteus oculatus (holostei) with particular attention to ganoine formation

J. Sire, 1994, The Anatomical record.

On the origin of ganoine: histological and ultrastructural data on the experimental regeneration of the scales of Calamoichthys calabaricus (Osteichthyes, Brachyopterygii, Polypteridae).

J. Sire, F. Meunier, L. Zylberberg, 1987, The American journal of anatomy.

Tooth development in a scincid lizard, Chalcides viridanus (Squamata), with particular attention to enamel formation

J. Sire, T. Davit-Béal, S. Delgado, 2004, Cell and Tissue Research.

Amphibian teeth: current knowledge, unanswered questions, and some directions for future research

J. Sire, T. Davit-Béal, S. Delgado, 2007, Biological reviews of the Cambridge Philosophical Society.

Comparative expression of the four enamel matrix protein genes, amelogenin, ameloblastin, enamelin and amelotin during amelogenesis in the lizard Anolis carolinensis

J. Sire, B. Gasse, 2015, EvoDevo.

Conservation of amelogenin gene expression during tetrapod evolution.

J. Sire, B. Gasse, T. Davit-Béal, 2013, Journal of experimental zoology. Part B, Molecular and developmental evolution.

Morphological variations in a tooth family through ontogeny in Pleurodeles waltl (Lissamphibia, Caudata)

J. Sire, T. Davit-Béal, F. Allizard, 2006, Journal of morphology.

Early development of the zebrafish (Danio rerio) pharyngeal dentition (Teleostei, Cyprinidae)

J. Sire, A. Huysseune, C. Van der heyden, 1998, Anatomy and Embryology.

First‐generation teeth in nonmammalian lineages: Evidence for a conserved ancestral character?

J. Sire, A. Huysseune, C. Van der heyden, 2002, Microscopy research and technique.

Evolution of patterns and processes in teeth and tooth-related tissues in non-mammalian vertebrates.

J. Sire, A. Huysseune, 1998, European journal of oral sciences.

Development and fine structure of pharyngeal replacement teeth in juvenile zebrafish (Danio rerio) (Teleostei, Cyprinidae)

J. Sire, A. Huysseune, C. Van der heyden, 2000, Cell and Tissue Research.

Cloning, Sequencing, and Expression of the Amelogenin Gene in Two Scincid Lizards

J. Sire, H. Magloire, M. Couble, 2006, Journal of dental research.

Structure and Development of Teeth in Three Armoured Catfish, Corydoras aeneus, C. arcuatus and Hoplosternum littorale (Siluriformes, Callichthyidae)

J. Sire, A. Huysseune, 1997 .

Structure and development of first-generation teeth in the cichlid Hemichromis bimaculatus (Teleostei, Cichlidae).

J. Sire, A. Huysseune, 1997, Tissue & cell.

Dentition and tooth replacement pattern in Chalcides (Squamata; Scincidae)

J. Sire, T. Davit-Béal, S. Delgado, 2003, Journal of morphology.

Common SNPs of AmelogeninX (AMELX) and Dental Caries Susceptibility

D. Droz, S. Grabar, M. Hennequin, 2013, Journal of dental research.

Amelogenin: lessons from evolution.

M. Girondot, J. Sire, S. Delgado, 2005, Archives of oral biology.

OC-116, the chicken ortholog of mammalian MEPE found in eggshell, is also expressed in bone cells.

T. Jaffredo, J. Sire, C. Bardet, 2010, Journal of experimental zoology. Part B, Molecular and developmental evolution.

Glossary of Skeletal Biomineralization

K. Bandel, V. Buffrénil, J. Sire, 2013 .

Amelotin Gene Structure and Expression during Enamel Formation in the Opossum Monodelphis domestica

E. Corre, J. Sire, Xi Liu, 2015, PloS one.

Bone and cartilage resorption in relation to tooth development in the anterior part of the mandible in cichlid fish: A light and TEM study

J. Sire, A. Huysseune, 1992, The Anatomical record.

Architecture, mineralization and development of the axial skeleton in Acipenseriformes, and occurrences of axial anomalies in rearing conditions; can current knowledge in teleost fish help?

J. Sire, A. Leprévost, 2014 .

Expression of the dlx gene family during formation of the cranial bones in the zebrafish (Danio rerio): Differential involvement in the visceral skeleton and braincase

J. Sire, A. Huysseune, M. Debiais-Thibaud, 2006, Developmental dynamics : an official publication of the American Association of Anatomists.

Developmental Differences Between Cranial Bones in the Zebrafish ( Danio rerio ): Some Preliminary Light and TEM Observations

J. Sire, A. Huysseune, L. Verreijdt, 2002, Connective tissue research.

Cytoskeletal organization and collagen orientation in the fish scales

J. Bereiter-Hahn, J. Sire, L. Zylberberg, 1988, Cell and Tissue Research.

Anin vitro, serum-free organ culture technique for the study of development and growth of the dermal skeleton in fish

J. Sire, J. Koumans, 1996, In Vitro Cellular & Developmental Biology - Animal.

Development and fine structure of the bony scutes in Corydoras arcuatus (Siluriformes, callichthyidae)

J. Sire, 1993, Journal of morphology.

Marking zebrafish, Danio rerio (cyprinidae), using scale regeneration.

M. Girondot, J. Sire, O. Babiar, 2000, The Journal of experimental zoology.

Evolutionary Story of Mammalian-specific Amelogenin Exons 4, “4b”, 8, and 9

M. Goldberg, J. Sire, P. DenBesten, 2012, Journal of dental research.

Ameloblasts Express Type I Collagen during Amelogenesis

J. Sire, J. Silvent, C. Bardet, 2014, Journal of dental research.

Tooth development in vitro in two teleost fish, the cichlid Hemichromis bimaculatus and the cyprinid Danio rerio

J. Sire, A. Huysseune, C. Van der heyden, 2005, Cell and Tissue Research.

Epidermal‐dermal and fibronectin cell‐interactions during fish scale regeneration: immunofluorescence and TEM studies

J. Sire, C. Joly, H. Boulekbache, 1990 .

Amelotin: an enamel matrix protein that experienced distinct evolutionary histories in amphibians, sauropsids and mammals

Y. Chiari, J. Sire, J. Silvent, 2015, BMC Evolutionary Biology.

The evolution of milk casein genes from tooth genes before the origin of mammals.

K. Kawasaki, J. Sire, A. Lafont, 2011, Molecular biology and evolution.

The enamelin genes in lizard, crocodile, and frog and the pseudogene in the chicken provide new insights on enamelin evolution in tetrapods.

K. Kawasaki, J. Sire, A. Lafont, 2010, Molecular biology and evolution.

Loss of teeth and enamel in tetrapods: fossil record, genetic data and morphological adaptations

A. Tucker, J. Sire, T. Davit‐Béal, 2009, Journal of anatomy.

Hen's teeth with enamel cap: from dream to impossibility

M. Girondot, J. Sire, S. Delgado, 2008, BMC Evolutionary Biology.

Enameloid/enamel transition through successive tooth replacements in Pleurodeles waltl (Lissamphibia, Caudata)

J. Sire, F. Allizard, T. Davit‐Béal, 2007, Cell and Tissue Research.

Microstructure and Mineralization of Vertebrate Skeletal Tissues

V. Buffrénil, J. Sire, F. Meunier, 2013 .

Structure and Growth Pattern of Pseudoteeth in Pelagornis mauretanicus (Aves, Odontopterygiformes, Pelagornithidae)

D. Geraads, A. Louchart, L. Viriot, 2013, PloS one.

Ganoine formation in the scales of primitive actinopterygian fishes, lepisosteids and polypterids.

J. Sire, 1995, Connective tissue research.

Structure and development of the ctenial spines on the scales of a teleost fish, the cichlid Cichlasoma nigrofasciatum

I. Arnulf, J. Sire, 2000 .

Fine Structure of the Developing Scale in the Cichlid Hemichromis bimaculatus (Pisces, Teleostei, Perciformes)

J. Sire, J. Géraudie, 1983 .

Evolutionary Analysis Predicts Sensitive Positions of MMP20 and Validates Newly- and Previously-Identified MMP20 Mutations Causing Amelogenesis Imperfecta

Marzena Kawczynski, M. Manière, A. Bloch-Zupan, 2017, Front. Physiol..

Amelotin: an enamel matrix protein that experienced distinct evolutionary histories in amphibians, sauropsids and mammals

Y. Chiari, J. Sire, J. Silvent, 2015, BMC Evolutionary Biology.

Molecular Evolution of Amelogenin in Mammals

M. Girondot, J. Sire, S. Delgado, 2003, Journal of Molecular Evolution.

Amelogenins: Multifaceted Proteins for Dental and Bone Formation and Repair

A. Kulkarni, S. Stupp, E. Beniash, 2010 .

Development of cartilage and bone tissues of the anterior part of the mandible in cichlid fish: A light and TEM study

J. Sire, A. Huysseune, 1992, The Anatomical record.

Skin development in bony fish with particular emphasis on collagen deposition in the dermis of the zebrafish (Danio rerio).

G. Morvan-Dubois, J. Sire, D. Le Guellec, 2004, The International journal of developmental biology.

Ultrastructural observations on chondroid bone in the teleost fish Hemichromis bimaculatus.

J. Sire, A. Huysseune, 1990, Tissue & cell.

Homozygous and Compound Heterozygous MMP20 Mutations in Amelogenesis Imperfecta

A. Bloch-Zupan, J. Sire, C. Schneider, 2013, Journal of dental research.

A study of polymorphism in human AMELX.

J. Sire, P. Gorry, Béatrice Richard, 2007, Archives of oral biology.

Vertebral Development and Ossification in the Siberian Sturgeon (Acipenser Baerii), with New Insights on Bone Histology and Ultrastructure of Vertebral Elements and Scutes

T. Azaïs, J. Sire, Michaël Trichet, 2017, Anatomical record.

Fine structure of the developing frontal bones and scales of the cranial vault in the cichlid fish Hemichromis bimaculatus (Teleostei, Perciformes)

J. Sire, A. Huysseune, 1993, Cell and Tissue Research.

Histomorphometrical studies of vertebral bone condition in farmed rainbow trout, Oncorhynchus mykiss

J. Sire, M. Deschamps, 2010 .

Assessment of "discreet" vertebral abnormalities, bone mineralization and bone compactness in farmed rainbow trout

P. Haffray, J. Sire, F. Meunier, 2008 .

Comparative study of lower pharyngeal jaw structure in two phenotypes of Astatoreochromis alluaudi (teleostei: Cichlidae)

J. Sire, A. Huysseune, F. Meunier, 1994, Journal of morphology.

Molecular Evolution of the Tissue-nonspecific Alkaline Phosphatase Allows Prediction and Validation of Missense Mutations Responsible for Hypophosphatasia*

J. Sire, E. Mornet, J. Silvent, 2014, The Journal of Biological Chemistry.

Missense Mutations Responsible for Allows Prediction and Validation of Tissue-nonspecific Alkaline Phosphatase Molecular Evolution of the Molecular Bases of Disease :

J. Sire, E. Mornet, J. Silvent, 2014 .

Dental Caries and Enamelin Haplotype

D. Droz, M. Hennequin, H. Tassery, 2014, Journal of dental research.

Amelogenin, the major protein of tooth enamel: a new phylogenetic marker for ordinal mammal relationships.

G. Veron, N. Vidal, J. Sire, 2008, Molecular phylogenetics and evolution.

Identification of two carbonic anhydrases in the mantle of the European Abalone Haliotis tuberculata (Gastropoda, Haliotidae): phylogenetic implications.

Benjamin Marie, Frédéric Marin, I. Zanella-Cléon, 2012, Journal of experimental zoology. Part B, Molecular and developmental evolution.

The amelogenin story: origin and evolution.

M. Girondot, J. Sire, S. Delgado, 2006, European journal of oral sciences.

Molecular evidence for precambrian origin of amelogenin, the major protein of vertebrate enamel.

D. Casane, M. Girondot, J. Sire, 2001, Molecular biology and evolution.

Evolution of the amelogenin gene in toothed and toothless vertebrates.

M. Girondot, J. Sire, 1998, European journal of oral sciences.

Origin and evolution of the integumentary skeleton in non‐tetrapod vertebrates

M. Vickaryous, P. Donoghue, J. Sire, 2009, Journal of anatomy.

The Dentin Matrix Acidic Phosphoprotein 1 (DMP1) in the Light of Mammalian Evolution

J. Sire, J. Silvent, S. Delgado, 2013, Journal of Molecular Evolution.

MEPE evolution in mammals reveals regions and residues of prime functional importance

J. Sire, C. Bardet, S. Delgado, 2009, Cellular and Molecular Life Sciences.

An enamel-like tissue, osteodermine, on the osteoderms of a fossil anguid (Glyptosaurinae) lizard

V. Buffrénil, J. Rage, J. Sire, 2011 .

Cellular expression of eve1 suggests its requirement for the differentiation of the ameloblasts and for the initiation and morphogenesis of the first tooth in the zebrafish (Danio rerio)

J. Sire, A. Huysseune, P. Laurenti, 2004, Developmental dynamics : an official publication of the American Association of Anatomists.

The histological structure of glyptosaurine osteoderms (Squamata: Anguidae), and the problem of osteoderm development in squamates

V. Buffrénil, J. Rage, J. Sire, 2010, Journal of morphology.

Prenatal development of Crocodylus niloticus niloticus Laurenti, 1768.

L. Viriot, J. Sire, J. Procházka, 2010, Journal of experimental zoology. Part B, Molecular and developmental evolution.

Scale development in fish: a review, with description of sonic hedgehog (shh) expression in the zebrafish (Danio rerio).

J. Sire, M. Akimenko, 2004, The International journal of developmental biology.

Formation of dermal skeletal and dental tissues in fish: a comparative and evolutionary approach

J. Sire, A. Huysseune, 2003, Biological reviews of the Cambridge Philosophical Society.

Osteoclasts in teleost fish: Light-and electron-microscopical observations

J. Sire, F. Meunier, A. Huysseune, 1990, Cell and Tissue Research.

The Canaliculi of Williamson in Holostean Bone (Osteichthyes, Actinopterygii): a Structural and Ultrastructural Study

J. Sire, F. Meunier, 1994 .

The Axial Skeleton of the Siberian Sturgeon. Development, Organization, Structure and New Insights on Mineralization and Ossification of Vertebral Elements

J. Sire, A. Leprévost, 2018 .

The development of squamation in four teleostean fishes with a survey of the literature

I. Arnulf, J. Sire, Isabelle Arnulf, 1990 .

Major discoveries on the dermal skeleton of fossil and Recent polypteriforms: a review

J. Sire, F. Meunier, Jacques Daget, 2001 .

Structure and Development of the Odontodes in an Armoured Catfish, Corydoras aeneus (Siluriformes, Callichthyidae)

J. Sire, A. Huysseune, 1996 .

A revised hypothesis on the evolutionary origin of the vertebrate dentition

P. Witten, J. Sire, A. Huysseune, 2010 .

Scale development in zebrafish (Danio rerio)

J. Sire, F. Allizard, A. Quilhac, 1997, Journal of anatomy.

Teeth outside the mouth in teleost fishes: how to benefit from a developmental accident

J. Sire, 2001, Evolution & development.

Comparison of teeth and dermal denticles (odontodes) in the teleost Denticeps clupeoides (Clupeomorpha)

J. Sire, F. Allizard, Stanislas Marin, 1998, Journal of morphology.

Scales in young Polypterus senegalus are elasmoid: new phylogenetic implications.

J. Sire, 1989, The American journal of anatomy.

Evidence that mineralized spherules are involved in the formation of the superficial layer of the elasmoid scale in cichlids Cichlasoma octofasciatum and Hemichromis bimaculatus (Pisces, Teleostei): an epidermal active participation?

J. Sire, 1988, Cell and Tissue Research.

The same cell lineage is involved in scale formation and regeneration in the teleost fish Hemichromis bimaculatus.

J. Sire, 1989, Tissue & cell.

Identification of a new mineralized tissue in the notochord of reared Siberian sturgeon (Acipenser baerii)

T. Azaïs, J. Sire, Michaël Trichet, 2017, Journal of morphology.

Unravelling the ontogeny of a Devonian early gnathostome, the “acanthodian” Triazeugacanthus affinis (eastern Canada)

R. Cloutier, J. Sire, Marion Chevrinais, 2017, PeerJ.

Old, new and new-old concepts about the evolution of teeth

P. Witten, J. Sire, A. Huysseune, 2014 .

Immunodetection of amelogenin‐like proteins in the ganoine of experimentally regenerating scales of Calamoichthys calabaricus, a primitive actinopterygian fish

A. Nanci, J. Sire, L. Zylberberg, 1997, The Anatomical record.

Spreading, proliferation, and differentiation of the epidermis after wounding a Cichlid fish, Hemichromis bimaculatus

J. Sire, A. Quilhac, 1999, The Anatomical record.

A fourth teleost lineage possessing extra-oral teeth: the genus atherion (teleostei; atheriniformes).

J. Sire, F. Allizard, 2001, European journal of morphology.

Ontogenic development of surface ornamentation in the scales o fHemichromis bimaculatus (Cichlidae)

J. Sire, 1986 .

Bony pseudoteeth of extinct pelagic birds (Aves, Odontopterygiformes) formed through a response of bone cells to tooth-specific epithelial signals under unique conditions

V. Buffrénil, A. Louchart, L. Viriot, 2018, Scientific Reports.

Restoration of the subepidermal tissues and scale regeneration after wounding a cichlid fish, Hemichromis bimaculatus

J. Sire, A. Quilhac, 1998 .

From Ganoid To Elasmoid Scales in the Actinopterygian Fishes

J. Sire, 1989 .

Validation of Amelogenesis Imperfecta Inferred from Amelogenin Evolution

M. Ishiyama, J. Sire, S. Delgado, 2007, Journal of dental research.

Membranes, minerals, and proteins of developing vertebrate enamel

C. Shuler, T. Diekwisch, D. Carlson, 2002, Microscopy research and technique.

Expression of Dlx genes during the development of the zebrafish pharyngeal dentition: evolutionary implications

J. Sire, A. Huysseune, D. Stock, 2006, Evolution & development.

Evidence for participation of the epidermis in the deposition of superficial layer of scales in zebrafish (Danio rerio): A SEM and TEM study

J. Sire, F. Allizard, A. Quilhac, 1997, Journal of morphology.

High-Resolution Histology for Craniofacial Studies on Zebrafish and Other Teleost Models.

J. Sire, A. Huysseune, P. Witten, 2021, Methods in molecular biology.

Digit loss in archosaur evolution and the interplay between selection and constraints

J. Horbańczuk, M. Richardson, J. Sire, 2013, Nature.

The revival of a so-called rotten fish: the ontogeny of the Devonian acanthodian Triazeugacanthus

R. Cloutier, J. Sire, Marion Chevrinais, 2015, Biology Letters.

Reelin expression during embryonic brain development in Crocodylus niloticus

A. Goffinet, F. Tissir, G. Meyer, 2003, The Journal of comparative neurology.

Expression of 20 SCPP genes during tooth and bone mineralization in Senegal bichir.

E. Corre, J. Sire, J. Silvent, 2023, Development genes and evolution.

Collagen Suprafibrillar Confinement Drives the Activity of Acidic Calcium-Binding Polymers on Apatite Mineralization.

F. Soncin, Yan Wang, T. Azaïs, 2021, Biomacromolecules.

UniDPlot: A software to detect weak similarities between two DNA sequences

Marc Girondot, Jean-Yves Sire, M. Girondot, 2010 .