W. Hashimoto

发表

Structure-based Conversion of the Coenzyme Requirement of a Short-chain Dehydrogenase/Reductase Involved in Bacterial Alginate Metabolism*

Wataru Hashimoto, B. Mikami, S. Kawai, 2014, The Journal of Biological Chemistry.

Crystallization and Preliminary X-ray Analysis of γ-Glutamyltranspeptidase from Escherichia coli K-12

Hideyuki Suzuki, H. Sakai, N. Sakabe, 1993 .

Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold.

B. Mikami, K. Murata, M. Yamasaki, 2004, The Journal of biological chemistry.

Escherichia coli K-12 can utilize an exogenous gamma-glutamyl peptide as an amino acid source, for which gamma-glutamyltranspeptidase is essential

H. Kumagai, W. Hashimoto, H. Suzuki, 1993, Journal of bacteriology.

Escherichia coli γ-glutamyltranspeptidase mutants deficient in processing to subunits

Hideyuki Suzuki, H. Kumagai, W. Hashimoto, 1992 .

Comparative characterization of three bacterial exo-type alginate lyases.

S. Kawai, M. Hirayama, K. Murata, 2016, International journal of biological macromolecules.

Crystallization and preliminary X-ray analysis of a novel unsaturated glucuronyl hydrolase from Bacillus sp. GL1.

B. Mikami, K. Murata, W. Hashimoto, 2003, Acta crystallographica. Section D, Biological crystallography.

Crystallization and preliminary X-ray analysis of the rhamnogalacturonan lyase YesW from Bacillus subtilis strain 168, a member of polysaccharide lyase family 11.

B. Mikami, K. Murata, M. Yamasaki, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystal Structure of Family 14 Polysaccharide Lyase with pH-dependent Modes of Action*

B. Mikami, Takashi Yamada, K. Murata, 2009, The Journal of Biological Chemistry.

Streptococcal phosphotransferase system imports unsaturated hyaluronan disaccharide derived from host extracellular matrices

B. Mikami, K. Murata, W. Hashimoto, 2018, bioRxiv.

A solute-binding protein in the closed conformation induces ATP hydrolysis in a bacterial ATP-binding cassette transporter involved in the import of alginate

B. Mikami, T. Kumasaka, K. Murata, 2017, The Journal of Biological Chemistry.

Microbial System for Polysaccharide Depolymerization: Enzymatic Route for Xanthan Depolymerization by Bacillus sp. Strain GL1

S. Kawai, K. Murata, W. Hashimoto, 1999, Applied and Environmental Microbiology.

Microbial system for polysaccharide depolymerization: enzymatic route for gellan depolymerization by Bacillus sp. GL1.

H. Kumagai, K. Murata, W. Hashimoto, 1997, Archives of biochemistry and biophysics.

Enhanced propagation of Granulicatella adiacens from human oral microbiota by hyaluronan

R. Takase, W. Hashimoto, S. Oiki, 2022, Scientific Reports.

Engineered membrane superchannel improves bioremediation potential of dioxin-degrading bacteria

B. Mikami, S. Kawai, Y. Aso, 2006, Nature Biotechnology.

4-Deoxy-l-erythro-5-hexoseulose Uronate (DEH) and DEH Reductase: Key Molecule and Enzyme for the Metabolism and Utilization of Alginate

S. Kawai, W. Hashimoto, 2022, Molecules.

Uncovering the reactive nature of 4-deoxy-l-erythro-5-hexoseulose uronate for the utilization of alginate, a promising marine biopolymer

S. Kawai, K. Murata, W. Hashimoto, 2019, Scientific Reports.

NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex.

B. Mikami, S. Kawai, K. Murata, 2005, Biochemical and biophysical research communications.

Crystallographic studies of Mycobacterium tuberculosis polyphosphate/ATP-NAD kinase complexed with NAD.

B. Mikami, S. Kawai, K. Murata, 2004, Journal of bioscience and bioengineering.

Cupredoxin-cancer interrelationship: azurin binding with EphB2, interference in EphB2 tyrosine phosphorylation, and inhibition of cancer growth.

A. Chakrabarty, A. Fialho, T. K. Das Gupta, 2007, Biochemistry.

Proteomics-based identification of outer-membrane proteins responsible for import of macromolecules in Sphingomonas sp. A1: alginate-binding flagellin on the cell surface.

B. Mikami, K. Murata, W. Hashimoto, 2005, Biochemistry.

Production of polyhydroxybutyrate and alginate from glycerol by Azotobacter vinelandii under nitrogen-free conditions

K. Murata, W. Hashimoto, F. Yoneyama, 2015, Bioengineered.

Bacillus Xanthan Depolymerization by Depolymerization : Enzymatic Route for Microbial System for Polysaccharide

S. Kawai, K. Murata, W. Hashimoto, 1999 .

Safety Assessment of Genetically Modified Rice and Potatoes with Soybean Glycinin

S. Utsumi, K. Murata, W. Hashimoto, 2002 .

Crystallization and preliminary X-ray analysis of an exotype alginate lyase Atu3025 from Agrobacterium tumefaciens strain C58, a member of polysaccharide lyase family 15.

B. Mikami, K. Murata, M. Yamasaki, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary crystallographic analysis of the cell-surface alginate-binding protein Algp7 isolated from Sphingomonas sp. A1.

B. Mikami, K. Murata, W. Hashimoto, 2009, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray analysis of alginate lyases A1-II and A1-II' from Sphingomonas sp. A1.

B. Mikami, K. Murata, M. Yamasaki, 2005, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray analysis of alginate lyase, a member of family PL-7, from Pseudomonas aeruginosa.

B. Mikami, K. Murata, M. Yamasaki, 2003, Acta crystallographica. Section D, Biological crystallography.

Crystallization and preliminary X-ray analysis of AlgS, a bacterial ATP-binding cassette (ABC) protein specific to macromolecule import.

B. Mikami, K. Murata, Y. Mishima, 2001, Acta crystallographica. Section D, Biological crystallography.

Xanthan Lyase of Bacillus sp. Strain GL1 Liberates Pyruvylated Mannose from Xanthan Side Chains

K. Murata, W. Hashimoto, H. Nankai, 1998, Applied and Environmental Microbiology.

Crystal structure of AlgQ2, a macromolecule (alginate)-binding protein of Sphingomonas sp. A1 at 2.0A resolution.

B. Mikami, K. Murata, Y. Mishima, 2002, Journal of molecular biology.

Characterization of alpha-L-rhamnosidase of Bacillus sp. GL1 responsible for the complete depolymerization of gellan.

S. Kawai, K. Murata, W. Hashimoto, 1999, Archives of biochemistry and biophysics.

Purification and characterization of microbial gellan lyase

K. Murata, H. Nakajima, W. Hashimoto, 1996, Applied and environmental microbiology.

Safety assessment of genetically engineered yeast: elimination of mutagenicity of the yeast Saccharomyces cerevisiae by decreasing the activity of methylglyoxal synthase

K. Murata, W. Hashimoto, T. Inose, 1997 .

Accelerated Alcoholic Fermentation of Intact Grapes by Saccharomyces Cerevisiae in Symbiosis with Microbial Community Inhabiting Grape-skin

W. Hashimoto, Daisuke Watanabe, 2021 .

Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation

B. Mikami, R. Takase, W. Hashimoto, 2022, Scientific Reports.

Safety assessment of genetically engineered potatoes with designed soybean glycinin: compositional analyses of the potato tubers and digestibility of the newly expressed protein in transgenic potatoes

S. Utsumi, K. Murata, Y. Ohkawa, 1999 .

Paenibacillus sp. strain HC1 xylanases responsible for degradation of rice bran hemicellulose.

K. Murata, W. Hashimoto, Keiko Tanaka, 2008, Microbiological research.

Degradation of rice bran hemicellulose by Paenibacillus sp. strain HC1: gene cloning, characterization and function of β-D-glucosidase as an enzyme involved in degradation

K. Murata, W. Hashimoto, Keiko Tanaka, 2005, Archives of Microbiology.

Bacterial System for Alginate Uptake and Degradation

B. Mikami, K. Murata, W. Hashimoto, 2009 .

Structure and Function of Bacterial Super-Biosystem Responsible for Import and Depolymerization of Macromolecules

B. Mikami, K. Murata, M. Yamasaki, 2005, Bioscience, biotechnology, and biochemistry.

Super-channel in bacteria: structural and functional aspects of a novel biosystem for the import and depolymerization of macromolecules.

B. Mikami, K. Murata, M. Yamasaki, 2004, Journal of bioscience and bioengineering.

Sphingomonas sp. A1 lyase active on both poly-β-d-mannuronate and heteropolymeric regions in alginate

K. Murata, M. Okamoto, W. Hashimoto, 1998 .

Crystal structure of YihS in complex with D-mannose: structural annotation of Escherichia coli and Salmonella enterica yihS-encoded proteins to an aldose-ketose isomerase.

Takafumi Itoh, Wataru Hashimoto, B. Mikami, 2008, Journal of molecular biology.

Novel Hyaluronate Lyase Involved in Pathogenicity of Streptococcus dysgalactiae subsp. equisimilis

Yukari Nakajima, T. Wada, Y. Iwata, 2020, Frontiers in Microbiology.

Structural studies on Laz, a promiscuous anticancer Neisserial protein

A. Chakrabarty, K. Murata, W. Hashimoto, 2015, Bioengineered.

Bacterial supersystem for alginate import/metabolism and its environmental and bioenergy applications

S. Kawai, K. Murata, W. Hashimoto, 2010, Bioengineered bugs.

A putative lipoprotein of Sphingomonas sp. strain A1 binds alginate rather than a lipid moiety.

K. Murata, W. Hashimoto, A. Ochiai, 2008, FEMS microbiology letters.

Aputative lipoprotein ofSphingomonas sp . strainA 1 binds alginate rather thana lipidmoiety

K. Murata, W. Hashimoto, A. Ochiai, 2008 .

Subunit Association of γ-Glutamyltranspeptidase of Escherichia coli K-12

Hideyuki Suzuki, H. Kumagai, Kenji Yamamoto, 1995 .

Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate

B. Mikami, K. Murata, W. Hashimoto, 2006, Journal of Biological Chemistry.

A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide.

B. Mikami, K. Murata, W. Hashimoto, 2006, Journal of molecular biology.

alpha-L-rhamnosidase of Sphingomonas sp. R1 producing an unusual exopolysaccharide of sphingan.

K. Murata, W. Hashimoto, 1998, Bioscience, biotechnology, and biochemistry.

Escherichia coli K-12 Can Utilize an Exogenous y-Glutamyl Peptide as an Amino Acid Source, for which -y-Glutamyltranspeptidase Is Essential

Hideyuki Suzuki, H. Kumagai, W. Hashimoto, 2003 .

Glutathione metabolism in Escherichia coli

Hideyuki Suzuki, H. Kumagai, W. Hashimoto, 1999 .

Molecular Identification of Oligoalginate Lyase ofSphingomonas sp. Strain A1 as One of the Enzymes Required for Complete Depolymerization of Alginate

S. Kawai, K. Murata, W. Hashimoto, 2000, Journal of bacteriology.

Polysaccharide Lyase: Molecular Cloning, Sequencing, and Overexpression of the Xanthan Lyase Gene of Bacillus sp. Strain GL1

K. Murata, W. Hashimoto, H. Nankai, 2001, Applied and Environmental Microbiology.

Molecular characterization of Escherichia coli NAD kinase.

S. Kawai, K. Murata, W. Hashimoto, 2001, European journal of biochemistry.

Biodegradation of Alginate, Xanthan, and Gellan

K. Murata, Y. Mishima, W. Hashimoto, 2002 .

Enzymatic and genetic bases on assimilation, depolymerization, and transport of heteropolysaccharides in bacteria.

B. Mikami, S. Kawai, K. Murata, 1999, Journal of bioscience and bioengineering.

A Novel Structural Fold in Polysaccharide Lyases

B. Mikami, K. Murata, W. Hashimoto, 2007, Journal of Biological Chemistry.

Plant Cell Wall Degradation by Saprophytic Bacillus subtilis Strains: Gene Clusters Responsible for Rhamnogalacturonan Depolymerization

K. Murata, W. Hashimoto, T. Itoh, 2007, Applied and Environmental Microbiology.

Structure of unsaturated rhamnogalacturonyl hydrolase complexed with substrate.

B. Mikami, K. Murata, W. Hashimoto, 2006, Biochemical and biophysical research communications.

Bacteria with a mouth: Discovery and new insights into cell surface structure and macromolecule transport

S. Kawai, K. Murata, W. Hashimoto, 2022, Proceedings of the Japan Academy. Series B, Physical and biological sciences.

Bacterial inducible expression of plant cell wall-binding protein YesO through conflict between Glycine max and saprophytic Bacillus subtilis

B. Mikami, H. Sugiura, W. Hashimoto, 2020, Scientific Reports.

Mutually Beneficial Symbiosis Between Human and Gut-Dominant Bacteroides Species Through Bacterial Assimilation of Host Mucosubstances

R. Takase, W. Hashimoto, Daisuke Watanabe, 2020, bioRxiv.

Structural determinants in bacterial 2‐keto‐3‐deoxy‐D‐gluconate dehydrogenase KduD for dual‐coenzyme specificity

B. Mikami, K. Murata, R. Takase, 2016, Proteins.

Metabolic Fate of Unsaturated Glucuronic/Iduronic Acids from Glycosaminoglycans

B. Mikami, K. Murata, R. Takase, 2015, The Journal of Biological Chemistry.

Molecular identification of an alpha-L-rhamnosidase from Bacillus sp strain GL1 as an enzyme involved in complete metabolism of gellan.

K. Murata, W. Hashimoto, O. Miyake, 2003, Archives of biochemistry and biophysics.

Crystal Structure of Bacillus sp. GL1 Xanthan Lyase, Which Acts on the Side Chains of Xanthan*

B. Mikami, K. Murata, W. Hashimoto, 2003, The Journal of Biological Chemistry.

Molecular Identification of Family 38 α-Mannosidase of Bacillus sp. Strain GL1, Responsible for Complete Depolymerization of Xanthan

K. Murata, W. Hashimoto, H. Nankai, 2002, Applied and Environmental Microbiology.

Unsaturated glucuronyl hydrolase of Bacillus sp. GL1: novel enzyme prerequisite for metabolism of unsaturated oligosaccharides produced by polysaccharide lyases.

S. Kawai, K. Murata, W. Hashimoto, 1999, Archives of biochemistry and biophysics.

Crystal structure of glycoside hydrolase family 78 alpha-L-Rhamnosidase from Bacillus sp. GL1.

B. Mikami, Z. Cui, K. Murata, 2007, Journal of molecular biology.

Polyunsaturated fatty acids-enriched lipid from reduced sugar alcohol mannitol by marine yeast Rhodosporidiobolus fluvialis Y2.

S. Kawai, R. Takase, W. Hashimoto, 2020, Biochemical and biophysical research communications.

Lateral-typed flagellin responsible for formation of a polar flagellum but not of lateral flagella in Sphingomonas sp. strain A1.

K. Murata, W. Hashimoto, Masahiro Kobayashi, 2016, Microbiology.

Lateral-typed flagellin responsible for formation of a polar flagellum but not of lateral flagella in Sphingomonas sp . strain A 1 Masahiro Kobayashi

K. Murata, W. Hashimoto, Y. Maruyama, 2016 .

Structural insights into alginate binding by bacterial cell-surface protein.

K. Murata, W. Hashimoto, K. Temtrirath, 2015, Carbohydrate research.

Alginate-Dependent Gene Expression Mechanism in Sphingomonas sp. Strain A1

K. Murata, R. Takase, W. Hashimoto, 2014, Journal of bacteriology.

Quality and safety evaluation of genetically engineered rice with soybean glycinin: analyses of the grain composition and digestibility of glycinin in transgenic rice.

S. Utsumi, S. Kawai, K. Murata, 1999, Bioscience, biotechnology, and biochemistry.

Bioethanol production from marine biomass alginate by metabolically engineered bacteria

Wataru Hashimoto, S. Kawai, K. Murata, 2011 .

Heterosubunit composition and crystal structures of a novel bacterial M16B metallopeptidase.

B. Mikami, K. Murata, W. Hashimoto, 2011, Journal of molecular biology.

Direct production of polyhydroxybutyrate and alginate from crude glycerol by Azotobacter vinelandii using atmospheric nitrogen

R. Takase, W. Hashimoto, Yuko Nambu, 2022, Scientific Reports.

Crystal Structure of Exotype Alginate Lyase Atu3025 from Agrobacterium tumefaciens*

B. Mikami, K. Murata, M. Yamasaki, 2010, The Journal of Biological Chemistry.

Crystal structure of alginate lyase A1-III from Sphingomonas species A1 at 1.78 A resolution.

B. Mikami, H. Yoon, K. Murata, 1999, Journal of molecular biology.

Substrate recognition by bacterial solute-binding protein is responsible for import of extracellular hyaluronan and chondroitin sulfate from the animal host

B. Mikami, K. Murata, W. Hashimoto, 2019, Bioscience, biotechnology, and biochemistry.

A bacterial ABC transporter enables import of mammalian host glycosaminoglycans

B. Mikami, K. Murata, W. Hashimoto, 2017, Scientific Reports.

Substrate recognition by family 7 alginate lyase from Sphingomonas sp. A1.

B. Mikami, K. Murata, M. Yamasaki, 2008, Journal of molecular biology.

A structural basis for depolymerization of alginate by polysaccharide lyase family-7.

B. Mikami, K. Murata, M. Yamasaki, 2005, Journal of molecular biology.

Structure and Function of a Hypothetical Pseudomonas aeruginosa Protein PA1167 Classified into Family PL-7

B. Mikami, K. Murata, M. Yamasaki, 2004, Journal of Biological Chemistry.

Crystal structure of alginate lyase A1-III complexed with trisaccharide product at 2.0 A resolution.

B. Mikami, H. Yoon, K. Murata, 2001, Journal of molecular biology.

Superchannel of Bacteria: Biological Significance and New Horizons

B. Mikami, S. Kawai, K. Murata, 2008, Bioscience, biotechnology, and biochemistry.

Origin and Diversity of Alginate Lyases of Families PL-5 and -7 in Sphingomonas sp. Strain A1

K. Murata, W. Hashimoto, A. Ochiai, 2004, Journal of bacteriology.

Bacterial proteins and CpG-rich extrachromosomal DNA in potential cancer therapy.

A. Chakrabarty, T. K. Das Gupta, M. Mahfouz, 2007, Plasmid.

Polysaccharide lyase: molecular cloning of gellan lyase gene and formation of the lyase from a huge precursor protein in Bacillus sp. GL1.

K. Murata, W. Hashimoto, N. Sato, 1998, Archives of biochemistry and biophysics.

Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas sp. A1 that corresponds to the typical IncP-1beta plasmid backbone without any accessory gene.

B. Mikami, Y. Aso, K. Murata, 2006, Plasmid.

Structural Determinants Responsible for Substrate Recognition and Mode of Action in Family 11 Polysaccharide Lyases*

B. Mikami, K. Murata, W. Hashimoto, 2009, Journal of Biological Chemistry.

Mutational studies of the peptidoglycan hydrolase FlgJ of Sphingomonas sp. strain A1

B. Mikami, K. Murata, W. Hashimoto, 2010, Journal of basic microbiology.

Transformation of Saccharomyces cerevisiae and other fungi

S. Kawai, K. Murata, W. Hashimoto, 2010, Bioengineered bugs.

Extremely simple, rapid and highly efficient transformation method for the yeast Saccharomyces cerevisiae using glutathione and early log phase cells.

S. Kawai, K. Murata, W. Hashimoto, 2002, Journal of bioscience and bioengineering.

Bacterial chemotaxis towards polysaccharide pectin by pectin-binding protein

R. Takase, W. Hashimoto, Masahiro Kobayashi, 2020, Scientific Reports.

Formation of a single polar flagellum by two distinct flagellar gene sets in Sphingomonas sp. strain A1.

K. Murata, W. Hashimoto, Masahiro Kobayashi, 2015, Microbiology.

Safety Assessment of Rice Genetically Modified with Soybean Glycinin by Feeding Studies on Rats

Hye Jin Yoon, S. Utsumi, S. Kawai, 2000, Bioscience, biotechnology, and biochemistry.

Safety assessment of transgenic potatoes with soybean glycinin by feeding studies in rats.

Hye Jin Yoon, S. Utsumi, K. Murata, 1999, Bioscience, biotechnology, and biochemistry.

Hsp104-dependent ability to assimilate mannitol and sorbitol conferred by a truncated Cyc8 with a C-terminal polyglutamine in Saccharomyces cerevisiae

S. Kawai, K. Murata, W. Hashimoto, 2020, PloS one.

Title Crystal structure of a bacterial unsaturated glucuronylhydrolase with specificity for heparin . Author ( s )

B. Mikami, K. Murata, W. Hashimoto, 2017 .

Crystal Structure of a Bacterial Unsaturated Glucuronyl Hydrolase with Specificity for Heparin*

B. Mikami, K. Murata, W. Hashimoto, 2014, The Journal of Biological Chemistry.

Structural Determinants in Streptococcal Unsaturated Glucuronyl Hydrolase for Recognition of Glycosaminoglycan Sulfate Groups*

B. Mikami, K. Murata, W. Hashimoto, 2010, The Journal of Biological Chemistry.

Hydration of vinyl ether groups by unsaturated glycoside hydrolases and their role in bacterial pathogenesis.

B. Mikami, K. Murata, W. Hashimoto, 2007, International microbiology : the official journal of the Spanish Society for Microbiology.

A novel member of glycoside hydrolase family 88: overexpression, purification, and characterization of unsaturated beta-glucuronyl hydrolase of Bacillus sp. GL1.

B. Mikami, K. Murata, W. Hashimoto, 2003, Protein expression and purification.

Substrate recognition by unsaturated glucuronyl hydrolase from Bacillus sp. GL1.

B. Mikami, K. Murata, W. Hashimoto, 2006, Biochemical and biophysical research communications.

Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III.

B. Mikami, H. Yoon, K. Murata, 2012, Acta crystallographica. Section D, Biological crystallography.

Molecular identification of Sphingomonas sp. A1 alginate lyase (A1-IV') as a member of novel polysaccharide lyase family 15 and implications in alginate lyase evolution.

K. Murata, W. Hashimoto, A. Ochiai, 2005, Journal of bioscience and bioengineering.

Crystal structure of Bacillus sp. GL1 xanthan lyase complexed with a substrate: insights into the enzyme reaction mechanism.

B. Mikami, K. Murata, W. Hashimoto, 2005, Journal of molecular biology.

A biosystem for alginate metabolism in Agrobacterium tumefaciens strain C58: molecular identification of Atu3025 as an exotype family PL-15 alginate lyase.

K. Murata, W. Hashimoto, A. Ochiai, 2006, Research in microbiology.

An exotype alginate lyase in Sphingomonas sp. A1: overexpression in Escherichia coli, purification, and characterization of alginate lyase IV (A1-IV).

K. Murata, W. Hashimoto, O. Miyake, 2003, Protein expression and purification.

A Novel Bacterial ATP-Binding Cassette Transporter System That Allows Uptake of Macromolecules

K. Murata, Y. Mishima, M. Okamoto, 2000, Journal of bacteriology.

Overexpression in Escherichia coli, purification, and characterization of Sphingomonas sp. A1 alginate lyases.

B. Mikami, H. Yoon, K. Murata, 2000, Protein expression and purification.

Effect of site-directed mutations on processing and activity of gamma-glutamyltranspeptidase of Escherichia coli K-12.

H. Kumagai, W. Hashimoto, K. Yamamoto, 1995, Journal of biochemistry.

Probiotics in human gut microbiota can degrade host glycosaminoglycans

K. Murata, W. Hashimoto, S. Oiki, 2018, Scientific Reports.

Special cell surface structure, and novel macromolecule transport/depolymerization system of Sphingomonas sp A1

B. Mikami, S. Kawai, K. Murata, 1999, Journal of Industrial Microbiology and Biotechnology.

A novel bleb-dependent polysaccharide export system in nitrogen-fixing Azotobacter vinelandii subjected to low nitrogen gas levels.

K. Murata, W. Hashimoto, Y. Miyamoto, 2013, International microbiology : the official journal of the Spanish Society for Microbiology.

Azotobacter vinelandii gene clusters for two types of peptidic and catechol siderophores produced in response to molybdenum

K. Murata, M. Yamamoto, W. Hashimoto, 2011, Journal of applied microbiology.

Inorganic Polyphosphate/ATP-NAD kinase of Micrococcus flavus and Mycobacterium tuberculosis H37Rv.

S. Kawai, K. Murata, S. Suzuki, 2000, Biochemical and biophysical research communications.

Molecular identification and characterization of an alginate-binding protein on the cell surface of Sphingomonas sp. A1.

Wataru Hashimoto, K. Murata, W. Hashimoto, 2004, Biochemical and biophysical research communications.

Structure of a Bacterial ABC Transporter Involved in the Import of an Acidic Polysaccharide Alginate.

B. Mikami, Y. Nishitani, K. Murata, 2015, Structure.

Molecular identification of unsaturated uronate reductase prerequisite for alginate metabolism in Sphingomonas sp. A1.

B. Mikami, K. Murata, R. Takase, 2010, Biochimica et biophysica acta.

Structural studies on bacterial system used in the recognition and uptake of the macromolecule alginate

K. Murata, W. Hashimoto, Y. Maruyama, 2019, Bioscience, biotechnology, and biochemistry.

Direct evidence for Sphingomonas sp. A1 periplasmic proteins as macromolecule-binding proteins associated with the ABC transporter: molecular insights into alginate transport in the periplasm.

Wataru Hashimoto, B. Mikami, K. Murata, 2005, Biochemistry.

Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 Å Resolution*

B. Mikami, K. Murata, W. Hashimoto, 2004, Journal of Biological Chemistry.

Posttranslational processing of polysaccharide lyase: maturation route for gellan lyase in Bacillus sp. GL1.

B. Mikami, K. Murata, W. Hashimoto, 2004, Archives of biochemistry and biophysics.

Structure and Function of a Hypothetical Pseudomonas aeruginosa Protein PA1167 Classified into Family PL-7 A NOVEL ALGINATE LYASE WITH A -SANDWICH FOLD*

B. Mikami, K. Murata, M. Yamasaki, 2004 .

Crystal Structure of AlgQ2, a Macromolecule (Alginate)-binding Protein of Sphingomonas sp. A1, Complexed with an Alginate Tetrasaccharide at 1.6-Å Resolution*

B. Mikami, K. Murata, Y. Mishima, 2003, The Journal of Biological Chemistry.

A Super-Channel in Bacteria: Macro-molecule Uptake and Depolymerization Systems of Sphingomonas sp. Al with a Special Cell Surface Structure

B. Mikami, K. Murata, Y. Mishima, 2002, Biotechnology & genetic engineering reviews.

X-ray structural analysis of alginate lyase A1-III mutants/substrate complexes: activation of a catalytic tyrosine residue by a flexible lid loop

B. Mikami, H. Yoon, K. Murata, 2002 .

Super-channel in Bacteria: Function and Structure of a Macromolecule Import System Mediated by a Pit-dependent ABC Transporter

B. Mikami, K. Murata, Y. Mishima, 2001, FEMS microbiology letters.

Crystal structure of N-acyl-D-glucosamine 2-epimerase from porcine kidney at 2.0 A resolution.

B. Mikami, K. Murata, W. Hashimoto, 2000, Journal of molecular biology.

Crystallization and preliminary X-ray crystallographic analysis of alginate lyase A1-II from Sphingomonas species A1.

B. Mikami, H. Yoon, K. Murata, 2000, Biochimica et biophysica acta.

Molecular cloning of two genes for beta-D-glucosidase in Bacillus sp. GL1 and identification of one as a gellan-degrading enzyme.

S. Kawai, K. Murata, W. Hashimoto, 1998, Archives of biochemistry and biophysics.

Pit structure on bacterial cell surface.

K. Murata, W. Hashimoto, T. Hisano, 1996, Biochemical and biophysical research communications.

Crystal structure of the glycosidase family 73 peptidoglycan hydrolase FlgJ.

B. Mikami, K. Murata, W. Hashimoto, 2009, Biochemical and biophysical research communications.

Crystallization and preliminary crystallographic analysis of the family GH78 alpha-L-rhamnosidase RhaB from Bacillus sp. GL1.

B. Mikami, Z. Cui, K. Murata, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystal structure of bacterial cell-surface alginate-binding protein with an M75 peptidase motif.

B. Mikami, K. Murata, W. Hashimoto, 2011, Biochemical and biophysical research communications.

A structural factor responsible for substrate recognition by Bacillus sp. GL1 xanthan lyase that acts specifically on pyruvated side chains of xanthan.

B. Mikami, K. Murata, W. Hashimoto, 2007, Biochemistry.

Identification of an Antifungal Substance Derived from the Oil-Based Extract of Licorice

S. Kawai, F. Nanjo, K. Goto, 2001 .

Overexpression, purification and preliminary X-ray analysis of pullulanase from Bacillus subtilis strain 168.

B. Mikami, S. Utsumi, K. Murata, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crucial role of 4-deoxy-L-erythro-5-hexoseulose uronate reductase for alginate utilization revealed by adaptive evolution in engineered Saccharomyces cerevisiae

S. Kawai, M. Hirayama, K. Murata, 2017, Scientific Reports.

Conformational Change in the Active Site of Streptococcal Unsaturated Glucuronyl Hydrolase Through Site-Directed Mutagenesis at Asp-115

B. Mikami, K. Murata, W. Hashimoto, 2016, The Protein Journal.

Substrate Specificity of Streptococcal Unsaturated Glucuronyl Hydrolases for Sulfated Glycosaminoglycan*

B. Mikami, K. Murata, W. Hashimoto, 2009, The Journal of Biological Chemistry.

Crystal structure of a novel bacterial cell-surface flagellin binding to a polysaccharide.

B. Mikami, K. Murata, W. Hashimoto, 2008, Biochemistry.

Alternative substrate-bound conformation of bacterial solute-binding protein involved in the import of mammalian host glycosaminoglycans

B. Mikami, K. Murata, W. Hashimoto, 2017, Scientific Reports.

Binding mode of metal ions to the bacterial iron import protein EfeO.

B. Mikami, K. Murata, W. Hashimoto, 2017, Biochemical and biophysical research communications.

Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter.

B. Mikami, Y. Nishitani, K. Murata, 2012, Biochemistry.

Crystallization and preliminary X-ray analysis of alginate importer from Sphingomonas sp. A1.

B. Mikami, Y. Nishitani, K. Murata, 2012, Acta crystallographica. Section F, Structural biology and crystallization communications.

A Preliminary Description of the Crystal Structure of γ-Glutamyltranspeptidase from E. coli K-12

Hideyuki Suzuki, H. Sakai, N. Sakabe, 1996 .

Crystal structures of EfeB and EfeO in a bacterial siderophore-independent iron transport system.

B. Mikami, R. Takase, W. Hashimoto, 2022, Biochemical and biophysical research communications.

Super-channel in bacteria: function and structure of a macromolecule import system mediated by a pit-dependent ABC transporter.

B. Mikami, K. Murata, Y. Mishima, 2001, Bioscience, biotechnology, and biochemistry.

Crystallization and preliminary X-ray diffraction studies of N-acyl-D-glucosamine 2-epimerase from porcine kidney.

B. Mikami, K. Murata, W. Hashimoto, 1996, Journal of biochemistry.

Disrupting the entry barrier and attacking brain tumors: the role of the Neisseria H.8 epitope and the Laz protein.

A. Chakrabarty, A. Fialho, T. K. Das Gupta, 2006, Cell cycle.

Growth repression of yeast and fungus by bacterial DNAs: A possible physiological function of DNA other than as a carriage of genetic information

K. Murata, W. Hashimoto, Y. Fukuda, 1997 .

Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis

K. Murata, K. Aisaka, W. Hashimoto, 2019, Scientific Reports.

Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis

K. Murata, K. Aisaka, W. Hashimoto, 2019, Scientific Reports.

Effect of His192 mutation on the activity of alginate lyase A1-III from Sphingomonas species A1

B. Mikami, Yong-Jin Choi, H. Yoon, 2001 .

Subunit association of gamma-glutamyltranspeptidase of Escherichia coli K-12.

H. Kumagai, W. Hashimoto, K. Yamamoto, 1995, Journal of biochemistry.

CRYSTAL STRUCTURE OF N-ACYL-D-GLUCOSAMINE 2-EPIMERASE FROM PORCINE KIDNEY

B. Mikami, K. Murata, W. Hashimoto, 2000 .

Mapping, Cloning, and DNA Sequencing of pepB Which Encodes Peptidase B of Escherichia coli K-12

Hideyuki Suzuki, H. Kumagai, Kenji Yamamoto, 1996 .

Adaptation of yeast Saccharomyces cerevisiae to grape-skin environment

W. Hashimoto, Daisuke Watanabe, 2023, Scientific reports.