Raja Banerjee

发表

A machine learning approach towards the prediction of protein–ligand binding affinity based on fundamental molecular properties

Goutam Paul, Raja Banerjee, Indra Kundu, 2018, RSC advances.

Interaction landscape of a ‘CαNN’ motif with arsenate and arsenite: a potential peptide-based scavenger of arsenic

Raja Banerjee, S. Sahu, Tridip Sheet, 2019, RSC advances.

prediction of protein – ligand binding a ffi nity based on fundamental molecular properties †

Indra Kundu, G. Paul, Raja Banerjee, 2018 .

Effect of biphosphate salt on dipalmitoylphosphatidylcholine bilayer deformation by Tat polypeptide

J. Chakrabarti, Raja Banerjee, Piya Patra, 2022, Biopolymers.

The 2.05‐helix in hetero‐oligopeptides entirely composed of Cα,α‐disubstituted glycines with both side chains longer than methyls

C. Toniolo, F. Formaggio, M. Crisma, 2014, Biopolymers.

Association of antitumor antibiotics, mithramycin and chromomycin, with Zn(II).

Raja Banerjee, D. Dasgupta, Sudipta Pal, 2007, Journal of inorganic biochemistry.

Computational design of model scaffold for anion recognition based on the ‘CαNN’ motif

Debnath Pal, Raja Banerjee, D. Pal, 2017, Biopolymers.

The ‘CαNN’ motif: an intrinsic lover of sulfate and phosphate ions

Raja Banerjee, Raja Banerjee, Tridip Sheet, 2016 .

Cα-Methyl-l-valine: A Preferential Choice over α-Aminoisobutyric Acid for Designing Right-Handed α-Helical Scaffolds.

C. Toniolo, F. Formaggio, S. Banerjee, 2021, Biochemistry.

Conformational preferences of a short Aib/Ala‐based water‐soluble peptide as a function of temperature

G. Basu, Raja Banerjee, Sarbani Chattopadhyay, 2009, Proteins.

Ratio of ellipticities between 192 and 208 nm (R1): An effective electronic circular dichroism parameter for characterization of the helical components of proteins and peptides

Raja Banerjee, Tridip Sheet, 2017, Proteins.

Aib-based peptide backbone as scaffolds for helical peptide mimics.

Siddhartha Roy, P. Chène, G. Basu, 2002, The journal of peptide research : official journal of the American Peptide Society.

Melanin from the Nitrogen-Fixing Bacterium Azotobacter chroococcum: A Spectroscopic Characterization

Raja Banerjee, Subhrangshu Supakar, Aulie Banerjee, 2014, PloS one.

Control of solvent exposure of cationic polypeptides in anionic environment

J. Chakrabarti, Raja Banerjee, Piya Patra, 2020 .

Conformational Preference of ‘CαNN’ Short Peptide Motif towards Recognition of Anions

Raja Banerjee, Raja Banerjee, Tridip Sheet, 2013, PloS one.

Anion induced conformational preference of CαNN motif residues in functional proteins

Piya Patra, Jaydeb Chakrabarti, Mahua Ghosh, 2017, Proteins.

Supplementary material from "PPIMpred: a web server for high-throughput screening of small molecules targeting protein–protein interaction"

Raja Banerjee, Sudipto Saha, Tanmoy Jana, 2017 .

The basic structural motif and major biophysical properties of Amyloid-β are encoded in the fragment 18–35

Neelanjana Sengupta, D. Bhowmik, S. Maiti, 2013 .

PPIMpred: a web server for high-throughput screening of small molecules targeting protein–protein interaction

Sudipto Saha, Raja Banerjee, Tanmoy Jana, 2017, Royal Society Open Science.

New facets of larger Nest motifs in proteins

D. Pal, Raja Banerjee, S. Sahu, 2020, Proteins.

Quantum chemical studies on anion specificity of CαNN motif in functional proteins

Raja Banerjee, Piya Patra, Mahua Ghosh, 2018, Journal of Computer-Aided Molecular Design.

Design of a Peptide-Based Model Leads for Scavenging Anions

Raja Banerjee, Tridip Sheet, 2020, ACS omega.

Sulfate ion interaction with 'anion recognition' short peptide motif at the N-terminus of an isolated helix: A conformational landscape.

Raja Banerjee, Raja Banerjee, Tridip Sheet, 2010, Journal of structural biology.

Effect of Phosphorylation on the Structure and Fold of Transactivation Domain of p53*

K. Sakaguchi, T. Kundu, Siddhartha Roy, 2002, The Journal of Biological Chemistry.

Understanding the behavioural difference of PPCA among its homologs in C7 family towards recognition of DXCA

Suvankar Ghosh, P. Choudhury, G. Paul, 2015, 1608.09009.

Effect of ester chemical structure and peptide bond conformation in fragmentation pathways of differently metal cationized cyclodepsipeptides.

Raja Banerjee, S. Sudarslal, S. Raghothama, 2011, Organic & biomolecular chemistry.

A Short Aib/Ala‐Based Peptide Helix Is as Stable as an Ala‐Based Peptide Helix Double Its Length

G. Basu, Raja Banerjee, 2002, Chembiochem : a European journal of chemical biology.

Alanine‐Induced Alteration of Organogelation Properties of Phenylalanine‐Based Shortest Peptide Sequence

Dipanjan Mukherjee, Raja Banerjee, R. Ghosh, 2023, ChemistrySelect.

Intrinsic proclivity of left-handed conformation in large Nest motif peptides inferred from molecular dynamics.

D. Pal, Raja Banerjee, S. Sahu, 2023, Journal of biomolecular structure & dynamics.

Direct evidence for alteration of unfolding profile of a helical peptide by far‐ultraviolet circular dichroism aromatic side‐chain contribution

G. Basu, Raja Banerjee, 2002, FEBS letters.