Harukazu Suzuki

发表

The mammalian protein-protein interaction database and its viewing system that is linked to the main FANTOM2 viewer.

Yoshihide Hayashizaki, Rintaro Saito, Christian Schönbach, 2003, Genome research.

Ligand-specific sequential regulation of transcription factors for differentiation of MCF-7 cells

Yoshiyuki Sakaki, Tetsuro Toyoda, Yoshihide Hayashizaki, 2009, BMC Genomics.

Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin

Yoshihide Hayashizaki, Yasuhiro Tomaru, Y. Hayashizaki, 2011, RNA biology.

Clusters of Internally Primed Transcripts Reveal Novel Long Noncoding RNAs

Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, 2006, PLoS genetics.

The combination of gene perturbation assay and ChIP-chip reveals functional direct target genes for IRF8 in THP-1 cells.

Jun Kawai, Yoshihide Hayashizaki, Yuki Hasegawa, 2010, Molecular immunology.

Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns

Masaru Tomita, Jun Kawai, Piero Carninci, 2010, BMC Genomics.

CDS annotation in full-length cDNA sequence.

Yoshihide Hayashizaki, Takeya Kasukawa, Rintaro Saito, 2003, Genome research.

A framework for identification of on- and off-target transcriptional responses to drug treatment

Erik Arner, Takahiro Arakawa, Satoshi Takizawa, 2019, Scientific Reports.

Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease

Carsten O. Daub, Vladimir B. Bajic, Tom C. Freeman, 2016, bioRxiv.

Interaction generality, a measurement to assess the reliability of a protein-protein interaction.

Yoshihide Hayashizaki, Rintaro Saito, Y. Hayashizaki, 2002, Nucleic acids research.

Deciphering the transcriptional circuitry of microRNA genes expressed during human monocytic differentiation

Sebastian Schmeier, Yoshihide Hayashizaki, Ulf Schaefer, 2009, BMC Genomics.

FANTOM5 CAGE profiles of human and mouse samples

Hiroshi Tanaka, Geoffrey J Faulkner, Sarah Klein, 2017, Scientific Data.

Two-step cleavage of hairpin RNA with 5' overhangs by human DICER

Yoshihide Hayashizaki, Joe Chiba, Y. Hayashizaki, 2011, BMC Molecular Biology.

Genome-wide investigation of in vivo EGR-1 binding sites in monocytic differentiation

Yoshihide Hayashizaki, Erik Arner, Atsutaka Kubosaki, 2009, Genome Biology.

Additional data file 5

Piero Carninci, Yoshihide Hayashizaki, Hideya Kawaji, 2003 .

Development of a DNA barcode tagging method for monitoring dynamic changes in gene expression by using an ultra high-throughput sequencer.

Piero Carninci, Yoshihide Hayashizaki, Akira Hasegawa, 2008, BioTechniques.

Transcriptional network dynamics in macrophage activation.

Piero Carninci, Diego di Bernardo, Manuela Gariboldi, 2006, Genomics.

Subcellular Localization of Mammalian Type II Membrane Proteins

Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, 2006, Traffic.

High-resolution analysis of aberrant regions in autosomal chromosomes in human leukemia THP-1 cell line

Toshio Kojima, Takahiro Suzuki, Harukazu Suzuki, 2009, BMC Research Notes.

Towards defining the nuclear proteome

Chikatoshi Kai, Nicholas Hamilton, Seetha Karunaratne, 2008, Genome Biology.

Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics

Vladimir B. Bajic, Sebastian Schmeier, Piero Carninci, 2015, Nucleic acids research.

Protein–protein interactions in the mammalian brain

Harukazu Suzuki, Harukazu Suzuki, 2006, The Journal of physiology.

Enhanced Identification of Transcriptional Enhancers Provides Mechanistic Insights into Diseases.

Yoshihide Hayashizaki, Hideya Kawaji, Yasuhiro Murakawa, 2016, Trends in genetics : TIG.

Targeting Batf2 for infectious diseases and cancer

Reto Guler, Frank Brombacher, Sugata Roy, 2015, Oncotarget.

Functional annotation of human long noncoding RNAs via molecular phenotyping.

Boris Lenhard, Lusy Handoko, Piero Carninci, 2020, Genome research.

Solution structure of a BolA‐like protein from Mus musculus

Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, 2004, Protein science : a publication of the Protein Society.

PAPD5-mediated 3′ adenylation and subsequent degradation of miR-21 is disrupted in proliferative disease

Piero Carninci, Yoshihide Hayashizaki, Joost Boele, 2014, Proceedings of the National Academy of Sciences.

Transcriptome Analysis Uncovers a Growth-Promoting Activity of Orosomucoid-1 on Hepatocytes

Piero Carninci, Yoshihide Hayashizaki, Hideya Kawaji, 2017, EBioMedicine.

A predictive computational framework for direct reprogramming between human cell types

Yoshihide Hayashizaki, Hai Fang, Enrico Petretto, 2016, Nature Genetics.

Single-cell transcriptomics reveals expansion of cytotoxic CD4 T cells in supercentenarians

Hideyuki Okano, Piero Carninci, Yasushi Okazaki, 2019, Proceedings of the National Academy of Sciences.

Construction of representative transcript and protein sets of human, mouse, and rat as a platform for their transcriptome and proteome analysis.

Yoshihide Hayashizaki, Hideya Kawaji, Takeya Kasukawa, 2004, Genomics.

Expression analysis of genes responsible for serotonin signaling in the brain

Yoshihide Hayashizaki, Hiroaki Nitta, Mutsumi Kanamori, 2005, Neurobiology of Disease.

Antisense Transcription in the Mammalian Transcriptome RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium

Boris Lenhard, Martin C. Frith, Jun Kawai, 2005 .