Ken Nishikawa

发表

Tertiary Structures of Proteins : Analysis of Conformations

Motohisa Oobatake, Tatsuo Ooi, Ken Nishikawa, 1970 .

Unique amino acid composition of proteins in halophilic bacteria.

Satoshi Fukuchi, K. Nishikawa, S. Fukuchi, 2003, Journal of molecular biology.

A distant evolutionary relationship between bacterial sphingomyelinase and mammalian DNase I

Y. Matsuo, K. Nishikawa, H. Ikezawa, 1996, Protein science : a publication of the Protein Society.

Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria.

Takashi Gojobori, Satoshi Fukuchi, Yoji Nakamura, 2007, Molecular biology and evolution.

Development of an accurate classification system of proteins into structured and unstructured regions that uncovers novel structural domains: its application to human transcription factors

Takashi Gojobori, Satoshi Fukuchi, K. Nishikawa, 2009, BMC Structural Biology.

Predicting secondary structures, contact numbers, and residue-wise contact orders of native protein structures from amino acid sequences using critical random networks

Akira R. Kinjo, K. Nishikawa, A. Kinjo, 2005, Biophysics.

Tertiary Structure of Proteins. I. : Representation and Computation of the Conformations

Nobuhiko Saitô, Tatsuo Ooi, K. Nishikawa, 1972 .

Intrinsically disordered loops inserted into the structural domains of human proteins.

Satoshi Fukuchi, K. Nishikawa, S. Fukuchi, 2006, Journal of molecular biology.

Cooperation between phenotypic plasticity and genetic mutations can account for the cumulative selection in evolution

Akira R. Kinjo, K. Nishikawa, A. Kinjo, 2014, Biophysics.

Compositional changes in RNA, DNA and proteins for bacterial adaptation to higher and lower temperatures.

Satoshi Fukuchi, Hiroshi Nakashima, K. Nishikawa, 2003, Journal of biochemistry.

Binary classification of protein molecules into intrinsically disordered and ordered segments

Takashi Gojobori, Satoshi Fukuchi, Kazuo Hosoda, 2011, BMC Structural Biology.

Wang-Landau molecular dynamics technique to search for low-energy conformational space of proteins.

Akira R Kinjo, Ken Nishikawa, Takehiro Nagasima, 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.

Computational Prediction of O-linked Glycosylation Sites That Preferentially Map on Intrinsically Disordered Regions of Extracellular Proteins

Ikuko Nishikawa, Satoshi Fukuchi, Masahiro Ito, 2010, International journal of molecular sciences.

Predicting Residue-wise Contact Orders of Native Protein Structure from Amino Acid Sequence

Akira R. Kinjo, K. Nishikawa, A. Kinjo, 2005 .

Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop.

Junichi Takagi, K. Nishikawa, J. Takagi, 2008, Acta crystallographica. Section D, Biological crystallography.

1 4 Fe b 20 05 Recoverable One-dimensional Encoding of Protein Three-dimensional Structures

Akira R. Kinjo, Ken Nishikawa, 2005 .

Tertiary Structure of Proteins. II. Freedom of Dihedral Angles and Energy Calculation

Tatsuo Ooi, K. Nishikawa, T. Ooi, 1972 .