Jens Nielsen

发表

Basic Biotechnology: Microbial process kinetics

J. Nielsen, Jens Nielsen, 2006 .

Mapping the polysaccharide degradation potential of Aspergillus niger

J. Nielsen, M. Andersen, Jens Nielsen, 2012, BMC Genomics.

Identifying anti-growth factors for human cancer cell lines through genome-scale metabolic modeling

Mathias Uhlen, Caroline Kampf, Adil Mardinoglu, 2015, Scientific Reports.

Genome‐scale metabolic representation of Amycolatopsis balhimycina

Tilmann Weber, Jochen Förster, Wanwipa Vongsangnak, 2012, Biotechnology and bioengineering.

Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae

Wanwipa Vongsangnak, Steen Krogsgaard, Kim Hansen, 2008, BMC Genomics.

Flux Control at the Malonyl-CoA Node through Hierarchical Dynamic Pathway Regulation in Saccharomyces cerevisiae.

Florian David, Verena Siewers, J. Nielsen, 2016, ACS synthetic biology.

Controllability analysis of transcriptional regulatory networks reveals circular control patterns among transcription factors.

Sergio Bordel, Tobias Österlund, J. Nielsen, 2015, Integrative biology : quantitative biosciences from nano to macro.

The Metabolic Response of Heterotrophic Arabidopsis Cells to Oxidative Stress1[W]

Joachim Selbig, Dirk Repsilber, Henning Redestig, 2006, Plant Physiology.

Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces cerevisiae

Michael C. Jewett, Eduardo Agosin, J. Nielsen, 2008, Applied and Environmental Microbiology.

Parallel kinetic Monte Carlo simulation framework incorporating accurate models of adsorbate lateral interactions.

James Hetherington, Michail Stamatakis, Mayeul d'Avezac, 2013, The Journal of chemical physics.

Genome-scale modeling enables metabolic engineering of Saccharomyces cerevisiae for succinic acid production

Rasmus Agren, J. Nielsen, Rasmus Agren, 2013, Journal of Industrial Microbiology & Biotechnology.

Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator

John R Yates, Lisbeth Olsson, Michael C Jewett, 2009, Molecular systems biology.

Microbial isoprenoid production: an example of green chemistry through metabolic engineering.

Anthony Clark, J. Nielsen, J. Maury, 2005, Advances in biochemical engineering/biotechnology.

The 2008 update of the Aspergillus nidulans genome annotation: a community effort.

Bernard Henrissat, Jibin Sun, Masashi Kato, 2009, Fungal genetics and biology : FG & B.

Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88.

Adrian Tsang, Alex Atkins, Harris Shapiro, 2011, Genome research.

Transcriptional profiling of extracellular amino acid sensing in Saccharomyces cerevisiae and the role of Stp1p and Stp2p

Carsten Friis, Peter Stein Nielsen, Birgitte Regenberg, 2004, Yeast.

Mapping the interaction of Snf1 with TORC1 in Saccharomyces cerevisiae

Ruedi Aebersold, Jie Zhang, Pramote Chumnanpuen, 2011, Molecular systems biology.

Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategies

Florian David, Jie Zhang, Raphael Ferreira, 2017, Microbial Cell Factories.

Reprogramming Yeast Metabolism from Alcoholic Fermentation to Lipogenesis

Florian David, Mingtao Huang, Quanli Liu, 2018, Cell.

Recon3D: A Resource Enabling A Three-Dimensional View of Gene Variation in Human Metabolism

Avlant Nilsson, Ronan M. T. Fleming, Elizabeth Brunk, 2018, Nature Biotechnology.

Metabolome Analysis: An Introduction

Ute Roessner, Silas G. Villas-Boas, Jørn Smedsgaard, 2007 .

Using Transcriptomics To Improve Butanol Tolerance of Synechocystis sp. Strain PCC 6803

E. P. Hudson, Mathias Uhlén, Elton P. Hudson, 2013, Applied and Environmental Microbiology.

Model-assisted fine-tuning of central carbon metabolism in yeast through dCas9-based regulation.

Florian David, Benjamín J. Sánchez, Verena Siewers, 2019, ACS synthetic biology.

A functional genomics approach using metabolomics and in silico pathway analysis.

Jochen Förster, Andreas Karoly Gombert, J. Nielsen, 2002, Biotechnology and bioengineering.

Balanced globin protein expression and heme biosynthesis improve production of human hemoglobin in Saccharomyces cerevisiae.

Dina Petranovic, Zihe Liu, D. Petranovic, 2014, Metabolic engineering.

Transcriptional, Proteomic, and Metabolic Responses to Lithium in Galactose-grown Yeast Cells*

Christoffer Bro, Birgitte Regenberg, J. Nielsen, 2003, Journal of Biological Chemistry.

Systemic analysis of the response of Aspergillus niger to ambient pH

J. Nielsen, M. Andersen, Jens Nielsen, 2009, Genome Biology.

Characterization of chromosomal integration sites for heterologous gene expression in Saccharomyces cerevisiae

Verena Siewers, J. Nielsen, V. Siewers, 2009, Yeast.

Mapping Condition-Dependent Regulation of Lipid Metabolism in Saccharomyces cerevisiae

Intawat Nookaew, Michael C. Jewett, Christopher T. Workman, 2013, G3: Genes, Genomes, Genetics.

The influence of microgravity on invasive growth in Saccharomyces cerevisiae.

Bart Devreese, Luk Daenen, Verena Siewers, 2011, Astrobiology.

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p

Michael C. Jewett, Gregory Stephanopoulos, Silas G. Villas-Boas, 2009, Proceedings of the National Academy of Sciences.

Fatty Acid-Derived Biofuels and Chemicals Production in Saccharomyces cerevisiae

Verena Siewers, J. Nielsen, V. Siewers, 2014, Front. Bioeng. Biotechnol..

Identification of flux regulation coefficients from elementary flux modes: A systems biology tool for analysis of metabolic networks

Intawat Nookaew, Sakarindr Bhumiratana, Asawin Meechai, 2007, Biotechnology and bioengineering.

Understanding the interactions between bacteria in the human gut through metabolic modeling

Intawat Nookaew, Sergio Bordel, Adil Mardinoglu, 2013, Scientific Reports.

Analysis of Aspergillus nidulans metabolism at the genome-scale

J. Nielsen, G. Hofmann, Jens Nielsen, 2008, BMC Genomics.

Intracellular metabolite profiling of Fusarium oxysporum converting glucose to ethanol.

Paul Christakopoulos, Lisbeth Olsson, Gianni Panagiotou, 2005, Journal of biotechnology.

Engineering of chromosomal wax ester synthase integrated Saccharomyces cerevisiae mutants for improved biosynthesis of fatty acid ethyl esters

Verena Siewers, J. Nielsen, V. Siewers, 2014, Biotechnology and bioengineering.

From flavors and pharmaceuticals to advanced biofuels: production of isoprenoids in Saccharomyces cerevisiae.

Verena Siewers, J. Nielsen, V. Siewers, 2013, Biotechnology journal.

A systems biology approach to study glucose repression in the yeast Saccharomyces cerevisiae

Lisbeth Olsson, Christoffer Bro, A. Oliveira, 2007, Biotechnology and bioengineering.

ChIP-exo analysis highlights Fkh1 and Fkh2 transcription factors as hubs that integrate multi-scale networks in budding yeast

Petter Holland, Matteo Barberis, J. Nielsen, 2019, Nucleic acids research.

Increasing jojoba-like wax ester production in Saccharomyces cerevisiae by enhancing very long-chain, monounsaturated fatty acid synthesis

Florian David, Richard R. Sprenger, Christer S. Ejsing, 2019, Microbial Cell Factories.