Yuan Luo

发表

Natural Language Processing for EHR-Based Pharmacovigilance: A Structured Review

Justin Starren, Yuan Luo, Matthew B Carson, 2017, Drug Safety.

Preoperative magnetic resonance imaging use and oncologic outcomes in premenopausal breast cancer patients

Seema A. Khan, I. Helenowski, Yuan Luo, 2020, npj Breast Cancer.

Somatic genetic aberrations in benign breast disease and the risk of subsequent breast cancer

Seema A. Khan, Andy H. Vo, X. Xuei, 2020, npj Breast Cancer.

Unique molecular signatures sustained in circulating monocytes and regulatory T cells in convalescent COVID-19 patients

M. Ison, S. Weinberg, C. M. Wai, 2022, bioRxiv.

Design and validation of a FHIR-based EHR-driven phenotyping toolbox

Natalie C. Benda, Evan T Sholle, Daniel J. Stone, 2022, J. Am. Medical Informatics Assoc..

Prevalence and risk factors of sleep disturbance in adults with underlying health conditions during the ongoing COVID-19 pandemic

S. Weintraub, J. Linder, P. Zee, 2022, Medicine.

Conjugated equine estrogen and medroxyprogesterone acetate are associated with decreased risk of breast cancer relative to bioidentical hormone therapy and controls

Yuan Luo, Zexian Zeng, Xia Jiang, 2018, PloS one.

PsmPy: A Package for Retrospective Cohort Matching in Python

Adrienne S. Kline, Adrienne Kline, Yuan Luo, 2022, 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC).

Proactive vs Reactive Machine Learning in Health Care: Lessons From the COVID-19 Pandemic.

R. Wunderink, Yuan Luo, D. Lloyd-Jones, 2022, JAMA.

Spatial transcriptomics resources to model spatial variability and cell-cell interactions

Yuan Luo, Zexian Zeng, Yawei Li, 2022, bioRxiv.

Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer’s disease

Tudor I. Oprea, Jessica L. Binder, T. Oprea, 2022, Cell reports.

Unsupervised clustering analysis of SARS-Cov-2 population structure reveals six major subtypes at early stage across the world

Yuan Luo, Zexian Zeng, Yawei Li, 2021, 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Natural Language Processing for EHR-Based Computational Phenotyping

Xiaoyu Li, Yuan Luo, Zexian Zeng, 2018, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Predictive Modeling of the Risk of Acute Kidney Injury in Critical Care: A Systematic Investigation of The Class Imbalance Problem.

Anand Srivastava, Fei Wang, Jyotishman Pathak, 2019, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Optimizing the evaluation of gene-targeted panels for tumor mutational burden estimation

Yuan Luo, Yawei Li, 2021, Scientific Reports.

Multinational characterization of neurological phenotypes in patients hospitalized with COVID-19

Jason W. Moore, Brett K. Beaulieu-Jones, Florence T. Bourgeois, 2021, Scientific Reports.

Multinational Prevalence of Neurological Phenotypes in Patients Hospitalized with COVID-19

I. Kohane, G. Omenn, T. Cai, 2021, medRxiv.

Circulating ACE2-expressing extracellular vesicles block broad strains of SARS-CoV-2

T. Hope, G. Randall, R. Kalluri, 2022, Nature communications.

International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study

Jeffrey G. Klann, Robert W. Follett, Darren W. Henderson, 2021, Journal of medical Internet research.

A Mendelian Randomization Approach Using 3-HMG-Coenzyme-A Reductase Gene Variation to Evaluate the Association of Statin-Induced Low-Density Lipoprotein Cholesterol Lowering With Noncardiovascular Disease Phenotypes

H. Hakonarson, M. Lee, J. Denny, 2021, JAMA network open.

Association of Pathogenic Variants in Hereditary Cancer Genes With Multiple Diseases.

N. Lennon, W. Chung, H. Hakonarson, 2022, JAMA oncology.

Simulation of Ventilator Allocation in Critically Ill Patients with COVID-19

C. Coopersmith, M. Peek, Yuan Luo, 2021, American journal of respiratory and critical care medicine.

Big Data and Data Science in Critical Care.

Yuan Luo, L. Nelson Sanchez-Pinto, Matthew M. Churpek, 2018, Chest.

Validation of an Internationally Derived Patient Severity Phenotype to Support COVID-19 Analytics from Electronic Health Record Data

Jeffrey G. Klann, Robert W. Follett, R. Bellazzi, 2021, J. Am. Medical Informatics Assoc..

Distinguishing Admissions Specifically for COVID-19 From Incidental SARS-CoV-2 Admissions: National Retrospective Electronic Health Record Study

Jeffrey G. Klann, G. Omenn, G. Weber, 2022, AMIA.

Deep learning for cancer type classification and driver gene identification

Chengsheng Mao, Yuan Luo, Zexian Zeng, 2021, BMC Bioinformatics.

Big Data in Stroke: How to Use Big Data to Make the Next Management Decision

A. Naidech, Yuan Luo, Yuzhe Liu, 2023, Neurotherapeutics.

MidCog study: a prospective, observational cohort study investigating health literacy, self-management skills and cognitive function in middle-aged adults

Laura M. Curtis, P. Zee, M. Kwasny, 2023, BMJ Open.

Tensor Factorization for Precision Medicine in Heart Failure with Preserved Ejection Fraction

Yuan Luo, Faraz S Ahmad, Sanjiv J Shah, 2017, Journal of Cardiovascular Translational Research.

International Analysis of Electronic Health Records of Children and Youth Hospitalized With COVID-19 Infection in 6 Countries

Jeffrey G. Klann, Deanne M. Taylor, I. Kohane, 2021, JAMA network open.

What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask (Preprint)

Jason W. Moore, Brett K. Beaulieu-Jones, Jeffrey G. Klann, 2020 .

Characterizing variability of electronic health record-driven phenotype definitions

Nephi A. Walton, H. Hakonarson, J. Pathak, 2022, J. Am. Medical Informatics Assoc..

Comparing the effects of four common drug classes on the progression of mild cognitive impairment to dementia using electronic health records

J. Pathak, J. Pacheco, L. Rasmussen, 2023, Scientific reports.

Preoperative magnetic resonance imaging use and oncologic outcomes in premenopausal breast cancer patients

Yuan Luo, Zexian Zeng, A. Amin, 2020, npj Breast Cancer.

Unique molecular signatures sustained in circulating monocytes and regulatory T cells in convalescent COVID-19 patients

M. Ison, S. Weinberg, N. Dashzeveg, 2023, Clinical immunology.

Blood pressure medication and acute kidney injury after intracerebral haemorrhage: an analysis of the ATACH-II trial

P. Bath, A. Naidech, Yuan Luo, 2023, BMJ neurology open.

STdGCN: accurate cell-type deconvolution using graph 1 convolutional networks in spatial transcriptomic data

Yuan Luo, Yawei Li, 2023 .

Spatial Transcriptomic Cell-type Deconvolution Using Graph Neural Networks

Yuan Luo, Yawei Li, 2023, bioRxiv.

Derivation, Validation, and Clinical Relevance of a Pediatric Sepsis Phenotype With Persistent Hypoxemia, Encephalopathy, and Shock*

Sareen Shah, R. Khemani, M. Hall, 2023, Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies.

SOAR: a spatial transcriptomics analysis resource to model spatial variability and cell type interactions

Yuan Luo, Zexian Zeng, Yawei Li, 2022 .

Are My EHRs Private Enough? Event-Level Privacy Protection

Yuan Zhao, Yuan Luo, Mengxin Sun, 2018, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Unsupervised clustering analysis of SARS-Cov-2 population structure reveals six major subtypes at early stage across the world

Yuan Luo, Yuan Luo, Zexian Zeng, 2020, bioRxiv.

Improving the Accuracy of Scores to Predict Gastrostomy after Intracerebral Hemorrhage with Machine Learning.

Konrad Paul Kording, A. Naidech, S. Prabhakaran, 2018, Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association.

Multiancestral polygenic risk score for pediatric asthma.

Theresa L. Walunas, Lisa J. Martin, H. Hakonarson, 2022, The Journal of allergy and clinical immunology.