Emily Flam

发表

Splice Expression Variation Analysis (SEVA) for Inter-tumor Heterogeneity of Gene Isoform Usage in Cancer

Daria A. Gaykalova, D. Geman, A. Favorov, 2016, bioRxiv.

A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers.

Bahman Afsari, Michael Considine, Emily Flam, 2017, Cancer research.

Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma

Alexander V. Favorov, Daria A. Gaykalova, Ludmila V. Danilova, 2018, Translational research : the journal of laboratory and clinical medicine.

Integrated landscape of cardiac metabolism in end-stage human nonischemic dilated cardiomyopathy

K. Margulies, Sunhee Jung, K. Bedi, 2022, Nature Cardiovascular Research.

Extra-cardiac BCAA catabolism lowers blood pressure and protects from heart failure.

J. Rabinowitz, M. Hyman, K. Margulies, 2021, Cell metabolism.

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF

Michael F. Ochs, Michael Considine, Emily Flam, 2016, bioRxiv.

Epigenetic regulation of gene expression in cancer: techniques, resources and analysis

Heather C. Wick, Alexander V. Favorov, Daria A. Gaykalova, 2017, bioRxiv.

Differentially Methylated Super-Enhancers Regulate Target Gene Expression in Human Cancer

Alexander V. Favorov, Daria A. Gaykalova, Ludmila V. Danilova, 2019, Scientific Reports.

Splice Expression Variation Analysis (SEVA) for Inter-tumor Heterogeneity of Gene Isoform Usage in Cancer

Donald Geman, Michael F. Ochs, Bahman Afsari, 2016, bioRxiv.

Discovery and development of differentially methylated regions in human papillomavirus‐related oropharyngeal squamous cell carcinoma

Alexander V. Favorov, Daria A. Gaykalova, Ludmila V. Danilova, 2018, International journal of cancer.

Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks.

Alexander V. Favorov, Daria A. Gaykalova, Ludmila V. Danilova, 2017, Cancer research.

Truncated titin proteins in dilated cardiomyopathy

K. Margulies, K. Bedi, M. Morley, 2021, Science Translational Medicine.

Metabolite signaling in the heart

Z. Arany, Emily Flam, 2023, Nature Cardiovascular Research.

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF

Genevieve L Stein-O’Brien, Jacob L Carey, Wai-shing Lee, 2016, bioRxiv.

PatternMarkers and Genome-Wide CoGAPS Analysis in Parallel Sets (GWCoGAPS) for data-driven detection of novel biomarkers via whole transcriptome Non-negative matrix factorization (NMF)

Michael F. Ochs, Wai-shing Lee, Michael Considine, 2016 .

Extra-cardiac BCAA catabolism lowers blood pressure and protects from heart failure.

J. Rabinowitz, K. Margulies, R. Assoian, 2022, Cell metabolism.

A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers.

Alexander V. Favorov, Daria A. Gaykalova, Ludmila V. Danilova, 2017, Cancer research.