D. Dreifuss

Detection of SARS-CoV-2 variants in Switzerland by genomic analysis of wastewater samples

N. Beerenwinkel, T. Stadler, P. Ganesanandamoorthy, 2021, medRxiv.

Tracking SARS-CoV-2 genomic variants in wastewater sequencing data with LolliPop

N. Beerenwinkel, D. Dreifuss, I. Topolsky, 2022, medRxiv.

Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC

N. Beerenwinkel, C. Beisel, T. Stadler, 2022, Nature Microbiology.

Detection and surveillance of SARS-CoV-2 genomic variants in wastewater

N. Beerenwinkel, C. Beisel, T. Stadler, 2021 .

Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland

Timothy M. Sykes, E. Dermitzakis, I. Xenarios, 2021, Epidemics.

Wastewater monitoring of SARS-CoV-2 shows high correlation with COVID-19 case numbers and allowed early detection of the first confirmed B.1.1.529 infection in Switzerland: results of an observational surveillance study.

N. Beerenwinkel, T. Stadler, S. Fuchs, 2022, Swiss medical weekly.

Inferring transmission fitness advantage of SARS-CoV-2 variants of concern from wastewater samples using digital PCR, Switzerland, December 2020 through March 2021

N. Beerenwinkel, C. Ort, Alexander J. Devaux, 2022, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

Inferring Transmission Fitness Advantage of SARS-CoV-2 Variants of Concern in Wastewater Using Digital PCR

N. Beerenwinkel, P. Ganesanandamoorthy, T. Schindler, 2021, medRxiv.

V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation

L. du Plessis, N. Beerenwinkel, D. Dreifuss, 2023, bioRxiv.

Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data

Devan G. Becker, Rafael A. Rosales, N. Beerenwinkel, 2023, bioRxiv.