C. Hirsch

发表

Spud DB: A Resource for Mining Sequences, Genotypes, and Phenotypes to Accelerate Potato Breeding

C. Buell, K. Childs, C. Hirsch, 2014 .

Classifying cold‐stress responses of inbred maize seedlings using RGB imaging

Nathan D. Miller, Steven T. Callen, Malia A. Gehan, 2019, Plant direct.

Classifying cold‐stress responses of inbred maize seedlings using RGB imaging

Nathan D. Miller, Nathan M. Springer, Steven T. Callen, 2018, bioRxiv.

Evaluating the Effects of Propiconazole on Hard Fescue (Festuca brevipila) via RNA sequencing and Liquid Chromatography–Mass Spectrometry

Y. Qiu, Ya Yang, E. Watkins, 2020, bioRxiv.

De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust

Marisa E. Miller, Jennifer M. Taylor, C. Raley, 2018, mBio.

De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust

Marisa E. Miller, Jennifer M. Taylor, C. Raley, 2017, mBio.

Opportunities and challenges in phenotyping row crops using drone‐based RGB imaging

Nathan M. Springer, N. Springer, C. Hirsch, 2022, The Plant Phenome Journal.

Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation

Marisa E. Miller, K. Silverstein, C. Raley, 2019, Nature Communications.

Building a Reference Transcriptome for the Hexaploid Hard Fescue Turfgrass (Festuca brevipila) Using a Combination of PacBio Iso-Seq and Illumina Sequencing

Y. Qiu, Ya Yang, E. Watkins, 2020, bioRxiv.

Towards Improved Molecular Identification Tools in Fine Fescue (Festuca L., Poaceae) Turfgrasses: Nuclear Genome Size, Ploidy, and Chloroplast Genome Sequencing

Y. Qiu, Ya Yang, E. Watkins, 2019, Frontiers in genetics.

Transposable elements contribute to dynamic genome content in maize

Alex B. Brohammer, Nathan M. Springer, Michelle C. Stitzer, 2019, bioRxiv.

Genetic diversity and phylogeny of strains of Clavibacter nebraskensis associated with recent and historic Goss's wilt epidemics in the north Central USA

D. Malvick, C. Ishimaru, C. Hirsch, 2020 .

Detection of Fusarium Head Blight in Wheat Using a Deep Neural Network and Color Imaging

A. Moghimi, Ce Yang, Ruicheng Qiu, 2019, Remote. Sens..

Highly Genotype- and Tissue-specific Single-Parent Expression Drives Dynamic Gene Expression Complementation in Maize Hybrids

Alex B. Brohammer, Nathan M. Springer, K. Barry, 2019, bioRxiv.

Hyperspectral imaging and improved feature variable selection for automated determination of deoxynivalenol in various genetic lines of barley kernels for resistance screening.

Ce Yang, B. Steffenson, Yanhong Dong, 2020, Food chemistry.

Lineage-specific adaptive evolution of the centromeric protein CENH3 in diploid and allotetraploid Oryza species.

Jiming Jiang, Yufeng Wu, Huihuang Yan, 2009, Molecular biology and evolution.

Dynamic Patterns of Transcript Abundance of Transposable Element Families in Maize

Nathan M. Springer, Michelle C. Stitzer, N. Springer, 2019, G3: Genes, Genomes, Genetics.

Structure and evolution of plant centromeres.

Jiming Jiang, J. Walling, M. Murata, 2009, Progress in molecular and subcellular biology.

RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome

Robert J. Schmitz, Gregory J. Zynda, Nathan M. Springer, 2015, Proceedings of the National Academy of Sciences.

Reduced representation approaches to interrogate genome diversity in large repetitive plant genomes.

C. Buell, C. Hirsch, C. Hirsch, 2014, Briefings in functional genomics.

Organization and Evolution of Subtelomeric Satellite Repeats in the Potato Genome

G. Bryan, Jiming Jiang, C. Buell, 2011, G3: Genes | Genomes | Genetics.

Transposable element influences on gene expression in plants.

Nathan M. Springer, N. Springer, C. Hirsch, 2017, Biochimica et biophysica acta. Gene regulatory mechanisms.

A Toolbox of Potato Genetic and Genomic Resources

C. Buell, C. Hirsch, C. Hirsch, 2016, American Journal of Potato Research.

Conservation and Purifying Selection of Transcribed Genes Located in a Rice Centromere[W]

R. Wing, Jiming Jiang, Jianwei Zhang, 2011, Plant Cell.

Natural variation for gene expression responses to abiotic stress in maize

Nathan M. Springer, N. Springer, C. Hirsch, 2017, The Plant journal : for cell and molecular biology.

Image-based Phenotyping Identifies Quantitative Trait Loci for Cluster Compactness in Grape

M. Clark, C. Hirsch, A. Underhill, 2020, Journal of the American Society for Horticultural Science.

Retrospective View of North American Potato (Solanum tuberosum L.) Breeding in the 20th and 21st Centuries

R. Veilleux, C. Buell, C. Hirsch, 2013, G3: Genes, Genomes, Genetics.

Identification of Candidate Susceptibility Genes to Puccinia graminis f. sp. tritici in Wheat

Marisa E. Miller, C. Myers, J. Vogel, 2021, bioRxiv.

Centromeres: Sequences, Structure, and Biology

Jiming Jiang, C. Hirsch, 2012 .

Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize[OPEN]

Kevin L. Childs, C. Robin Buell, Christopher J. Fields, 2016, Plant Cell.

Genomic limitations to RNA sequencing expression profiling.

Nathan M. Springer, N. Springer, C. Hirsch, 2015, The Plant journal : for cell and molecular biology.

Towards Improved Molecular Identification Tools in Fine Fescue (Festuca L., Poaceae) Turfgrasses: Nuclear Genome Size, Ploidy, and Chloroplast Genome Sequencing

Y. Qiu, Ya Yang, E. Watkins, 2019, bioRxiv.

Towards Improved Molecular Identification Tools in Fine Fescue (Festuca L., Poaceae) Turfgrasses: Nuclear Genome Size, Ploidy, and Chloroplast Genome Sequencing

Y. Qiu, Ya Yang, E. Watkins, 2019, Front. Genet..

Chloroplast Genome Sequencing and Comparative Analysis for Five Species of the Turfgrass Fine Fescues (Festuca L., Poaceae)

Y. Qiu, Ya Yang, E. Watkins, 2019 .

Evaluating and Mapping Grape Color Using Image-Based Phenotyping

M. Clark, C. Hirsch, A. Underhill, 2020, Plant phenomics.

DNA-based detection of Aphanomyces cochlioides in soil and sugar beet plants

F. Martin, C. Hirsch, A. Chanda, 2022, bioRxiv.

A reference genome sequence resource for the sugar beet root rot pathogen Aphanomyces cochlioides

F. Martin, C. Hirsch, A. Chanda, 2021, bioRxiv.

Automatic Evaluation of Wheat Resistance to Fusarium Head Blight Using Dual Mask-RCNN Deep Learning Frameworks in Computer Vision

Ce Yang, Jiajing Zhang, Brian J. Steffenson, 2020, Remote. Sens..

Wheat-Net: An Automatic Dense Wheat Spike Segmentation Method Based on an Optimized Hybrid Task Cascade Model

Ce Yang, B. Steffenson, C. Hirsch, 2022, Frontiers in Plant Science.

Single-parent expression drives dynamic gene expression complementation in maize hybrids.

Christine H. O’Connor, Alex B. Brohammer, Nathan M. Springer, 2020, The Plant journal : for cell and molecular biology.

Transposable elements contribute to dynamic genome content in maize 1

Alex B. Brohammer, Nathan M. Springer, Michelle C. Stitzer, 2022 .

Structure and evolution of plant centromeres.

Jiming Jiang, J. Walling, M. Murata, 2009, Progress in molecular and subcellular biology.

Conservation and Purifying Selection of Transcribed Genes Located in a Rice Centromere[W]

R. Wing, Jiming Jiang, Jianwei Zhang, 2011, Plant Cell.

An RGB based deep neural network for high fidelity Fusarium head blight phenotyping in wheat

Kevin P. Smith, Ce Yang, B. Steffenson, 2023, bioRxiv.

Chloroplast Genome Sequencing and Comparative Analysis for 1 Five Species of the Turfgrass Fine Fescues (Festuca L . , Poaceae ) 2

Y. Qiu, Ya Yang, E. Watkins, 2019 .

Plant height defined growth curves during vegetative development have the potential to predict end of season maize yield and assist with mid-season management decisions

C. Hirsch, C. Hirsch, Dorothy D. Sweet, 2024, bioRxiv.