H. Shindo

发表

Retention behavior of oligomeric proanthocyanidins in hydrophilic interaction chromatography.

T. Kanda, M. Ohnishi-Kameyama, A. Yanagida, 2007, Journal of chromatography. A.

Phosphorus-31 nuclear magnetic resonance of highly oriented DNA fibers. 1. Static geometry of DNA double helices.

Y. Kyōgoku, T. Fujiwara, H. Akutsu, 1985, Biochemistry.

Phosphorus-31 nuclear magnetic resonance of highly oriented DNA fibers. 2. Molecular motions in hydrated DNA.

T. Fujiwara, H. Shindo, 1985, Biochemistry.

High precision NMR structure of YhhP, a novel Escherichia coli protein implicated in cell division.

H Shindo, T. Yamazaki, T. Mizuno, 2000, Journal of molecular biology.

Studies on phosphorylated transcriptional regulator (NarL) for E. coli nar operon by 31P-NMR spectroscopy.

S. Noji, S. Taniguchi, H. Shindo, 1993, Biochemistry and molecular biology international.

Temperature dependence and sequence specificity of DNA triplex formation: An analysis using isothermal titration calorimetry

A. Sarai, H. Torigoe, H. Shindo, 1996 .

Characterization of the binding of HU and IHF, homologous histone-like proteins of Escherichia coli, to curved and uncurved DNA.

M. Shimizu, H. Shindo, U. Matsumoto, 1995, Biochimica et biophysica acta.

13C NMR study of conformation and mobility of 145-base-pair poly(dA-dT) . poly(dA-dT) in solution.

H. Shindo, 1981, European journal of biochemistry.

An alternating conformation characterizes the phosphodiester backbone of poly(dA-dT) in solution.

R. Simpson, J. Cohen, H. Shindo, 1979, The Journal of biological chemistry.

Collective solvent flows around a protein investigated by molecular dynamics simulation.

S. Shimotakahara, J. Higo, K. Umezawa, 2007, The Journal of chemical physics.

Crystal structure and molecular dynamics simulation of ubiquitin-like domain of murine parkin.

K. Tomoo, T. Ishida, A. Yamano, 2008, Biochimica et biophysica acta.

Observation of Water Molecules Bound to a Protein Using Cold-Spray Ionization Mass Spectrometry

S. Shimotakahara, M. Tashiro, H. Shindo, 2005, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.

Identification of bound waters in the solution structure of ribonuclease T1 using the double pulsed field gradient spin‐echo NMR technique for selective water excitation

S. Shimotakahara, M. Tashiro, K. Furihata, 2002 .

Separation of apple procyanidins into different degrees of polymerization by high-speed counter-current chromatography.

Y. Ito, A. Yanagida, H. Shindo, 2001, Journal of chromatography. A.

Rapid and simple determination of epoxyeicosatrienoic acids in rabbit renal artery by reversed-phase HPLC with fluorescence detection.

H. Shindo, Y. Shibusawa, T. Miwa, 2005, Vascular pharmacology.

Identification of the DNA binding surface of H‐NS protein from Escherichia coli by heteronuclear NMR spectroscopy

T. Yamazaki, T. Mizuno, E. Katoh, 1999, FEBS letters.

Electron spin resonance study of the binding structures of cationic water-soluble metalloporphyrins on highly oriented deoxyribonucleic acid fibres

H. Shindo, N. Kobayashi, M. Chikira, 1995 .

Conformation of DNA in chromatin core particles containing poly(dAdT)-poly(dAdT) studied by 31 P NMR spectroscopy.

R. Simpson, H. Shindo, 1979, Nucleic acids research.

Analytical separation of tea catechins and food-related polyphenols by high-speed counter-current chromatography.

A. Yanagida, Atsushi Shoji, M. Tagashira, 2006, Journal of chromatography. A.

Thermodynamic and kinetic studies of DNA triplex formation of an oligohomopyrimidine and a matched duplex by filter binding assay.

A. Sarai, H. Torigoe, H. Shindo, 1993, Biochemistry.

Chemically Induced Dynamic Nuclear Polarization in the Photochemical Reaction of Phenanthraquinone with Hydrogen Donors. I. Kinetics of Nuclear Spin Polarization

T. Maruyama, K. Maruyama, H. Shindo, 1971 .

Sunlight Induces Nε‐(Carboxymethyl)Lysine Formation from Glycated Polylysine–Iron(III) Complex ¶

M. Nakano, H. Shindo, Y. Shibusawa, 2001 .

Sunlight Induces Nε-(Carboxymethyl)Lysine Formation from Glycated Polylysine–Iron(III) Complex¶

M. Nakano, H. Shindo, Y. Shibusawa, 2001 .

DNA-fiber EPR study of the orientation of Cu(II) complexes of 1,10-phenanthroline and its derivatives bound to DNA: mono(phenanthroline)-copper(II) and its ternary complexes with amino acids.

W. Antholine, H. Shindo, T. Sugizaki, 2002, Journal of inorganic biochemistry.

Observation of individual carboxyl groups in hen egg-white lysozyme by use of high field 13C-nuclear magnetic resonance.

J. Cohen, H. Shindo, 1976, Proceedings of the National Academy of Sciences of the United States of America.

Conformation of 145 base pair length poly (dG-dC) . poly (dG-dC) in solution and in association with histones.

R. Simpson, H. Shindo, 1980, Nucleic acids research.

Mechanism of oligonucleotide loop formation in solution.

E. Appella, J. Sussman, M. Miller, 1986, Biochemistry.

Backbone geometry of oriented DNA fibers as revealed by 31P chemical shielding anisotropy.

H. Shindo, 1985, Advances in biophysics.

Internal pH and state of ATP in adrenergic chromaffin granules determined by 31P nuclear magnetic resonance spectroscopy.

H. Pollard, J. Cohen, H. Shindo, 1979, The Journal of biological chemistry.

Nuclear magnetic resonance titration curves of histidine ring protons. A direct assignment of the resonances of the active site histidine residues of ribonuclease.

J. Cohen, H. Shindo, M. Hayes, 1976, The Journal of biological chemistry.

Nuclear magnetic resonance titration curves of histidine ring protons. Conformational transition affecting three of the histidine residues of ribonuclease.

J. Cohen, H. Shindo, 1975, The Journal of biological chemistry.

Chemically Induced Dynamic Nuclear Polarization in the Photochemical Reaction of Phenanthraquinone with Hydrogen Donors. II. A Consideration of Unusual Nuclear Spin Polarization

T. Maruyama, K. Maruyama, H. Shindo, 1971 .

Nucleic Acids

H Shindo, H. Shindo, John F. Norton, 1932, Nature.

How amino acids control the binding of Cu(II) ions to DNA. Part III. A novel interaction of a histidine complex with DNA.

M. Oumi, W. Antholine, H. Shindo, 2000, Journal of inorganic biochemistry.

How amino acids control the binding of Cu(II) ions to DNA: I—The role of the hydroxyl group of serine and threonine in fixing the orientation of the complexes

H. Shindo, M. Chikira, T. Nojima, 1996 .

Nonuniform backbone conformation of deoxyribonucleic acid indicated by phosphorus-31 nuclear magnetic resonance chemical shift anisotropy.

B. H. Pheiffer, S. Zimmerman, H. Shindo, 1980, Biochemistry.

How amino acids control the binding of Cu(II) ions to DNA (II): effect of basic amino acid residues and the chirality on the orientation of the complexes.

H. Shindo, M. Chikira, R. Nagane, 1997, Journal of inorganic biochemistry.

Counter-current chromatographic estimation of hydrophobicity of Z-(cis) and E-(trans) enalapril and kinetics of cis/trans isomerization.

A. Yanagida, Atsushi Shoji, H. Shindo, 2007, Journal of chromatography. A.

Aqueous-aqueous two-phase systems composed of low molecular weight of polyethylene glycols and dextrans for counter-current chromatographic purification of proteins.

A. Yanagida, H. Shindo, Y. Shibusawa, 2006, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

Three-phase solvent systems for comprehensive separation of a wide variety of compounds by high-speed counter-current chromatography.

A. Yanagida, Y. Yamakawa, H. Shindo, 2006, Journal of chromatography. A.

Comprehensive separation of secondary metabolites in natural products by high-speed counter-current chromatography using a three-phase solvent system.

A. Yanagida, Y. Yamakawa, H. Shindo, 2007, Journal of chromatography. A.

Countercurrent Chromatographic Purification of Polysaccharides from Achyranthes bidentata with an Aqueous Two‐Phase System Using a Cross‐Axis Coil Planet Centrifuge

H. Shindo, Y. Shibusawa, Y. Ito, 2003 .

Determination of Log Po/w for Catechins and Their Isomers, Oligomers, and Other Organic Compounds by Stationary Phase Controlled High‐Speed Countercurrent Chromatography

A. Yanagida, Atsushi Shoji, M. Tagashira, 2005 .

Purification of alcohol dehydrogenase from bovine liver crude extract by dye-ligand affinity counter-current chromatography.

H. Shindo, Y. Shibusawa, Y. Ito, 2004, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

One-step purification of histone deacetylase from Escherichia coli cell-lysate by counter-current chromatography using aqueous two-phase system.

A. Yanagida, H. Shindo, Y. Shibusawa, 2007, Journal of chromatography. A.

Purification of glucosyltransferase from cell-lysate of Streptococcus mutans by counter-current chromatography using aqueous polymer two-phase system.

A. Yanagida, H. Shindo, Y. Shibusawa, 2004, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

Purification of Glucosyltransferase from Streptococcus sobrinus Cell Culture Medium by Combined Use of Batch Extraction and Countercurrent Chromatography with a Polymer Phase System

A. Yanagida, H. Shindo, Y. Shibusawa, 2004 .

Purification of single-strand DNA binding protein from an Escherichia coli lysate using counter-current chromatography, partition and precipitation.

T. Kinebuchi, M. Shimizu, H. Shindo, 2003, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

Purification of lactic acid dehydrogenase from crude bovine heart extract by pH-peak focusing counter-current chromatography.

H. Shindo, Y. Shibusawa, Y. Ito, 2002, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

SEPARATION OF CHICKEN EGG WHITE PROTEINS BY HIGH-SPEED COUNTERCURRENT CHROMATOGRAPHY

S. Iino, H. Shindo, Y. Shibusawa, 2001 .

Search for new aqueous-aqueous two-phase systems for the countercurrent chromatographic separation of proteins

H. Shindo, Y. Shibusawa, W. Nagatsuka, 2004 .

High-speed counter-current chromatography of apple procyanidins.

Y. Ito, A. Yanagida, H. Shindo, 2000, Journal of chromatography. A.

Separation of Apple Catechin Oligomers by CCC

A. Yanagida, H. Shindo, Y. Shibusawa, 2003 .

NMR study of the structures of repeated sequences, GAGXGA (X = S, Y, V), in Bombyx mori liquid silk.

T. Yamazaki, T. Asakura, H. Shindo, 2014, Biomacromolecules.

Specific peptide-protein interactions in the ribonuclease S' system studied by 13C nuclear magnetic resonance spectroscopy with selectively 13C-enriched peptides.

J. Cohen, H. Shindo, C. Niu, 1979, The Journal of biological chemistry.

Nuclear magnetic spectra of self complementary decanucleotides in solution; base sequence effect on the chemical shifts of nonexchangeable protons.

G. Zon, C. Giessner-Prettre, H. Shindo, 1988, Journal of biomolecular structure & dynamics.

Mitochondria-specific RNA-modifying Enzymes Responsible for the Biosynthesis of the Wobble Base in Mitochondrial tRNAs

Y. Ohya, Tsutomu Suzuki, Takeo Suzuki, 2005, Journal of Biological Chemistry.

Application of 13C-labeling and nuclear magnetic resonance spectroscopy to pharmacokinetic research: measurement of metabolic rate of benzoic acid to hippuric acid in the rat.

S. Baba, H. Shindo, S. Takeo, 1993, Analytical biochemistry.

Thermodynamic and kinetic analyses of DNA triplex formation: application of filter-binding assay.

A. Sarai, H. Torigoe, H. Shindo, 1993, Journal of biomolecular structure & dynamics.

Deuterium nuclear magnetic resonance of oriented DNA fibers

D. Torchia, Y. Hiyama, Siddhartha Roy, 1987 .

Sequence-dependent variations in the backbone geometry of a synthetic DNA fibre

S. Zimmerman, H. Shindo, 1980, Nature.

NMR relaxation processes of 31P in macromolecules

H. Shindo, 1980, Biopolymers.

Transcriptional repression at a distance through exclusion of activator binding in vivo.

A. Mitchell, M. Shimizu, H. Shindo, 1997, Proceedings of the National Academy of Sciences of the United States of America.

Self-association of hen egg-white lysozyme as studied by nuclear magnetic resonance.

J. A. Rupley, J. Cohen, H. Shindo, 1977, Biochemistry.

Carbon-13 nuclear magnetic resonance studies of proteins.

J. Cohen, H. Shindo, W. Egan, 1977, Annual review of biophysics and bioengineering.

Effects of triplet repeat sequences on nucleosome positioning and gene expression in yeast minichromosomes.

R. Wells, R. Fujita, M. Shimizu, 2002, Nucleic acids research. Supplement.

Solution structure of the DNA binding domain of a nucleoid‐associated protein, H‐NS, from Escherichia coli

T. Mizuno, H. Kurumizaka, C. Ueguchi, 1995, FEBS letters.

NMR Structure of the N-terminal Domain of SUMO Ligase PIAS1 and Its Interaction with Tumor Suppressor p53 and A/T-rich DNA Oligomers*

S. Yokoyama, S. Shimotakahara, Hirofumi Tanaka, 2004, Journal of Biological Chemistry.

PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2

T. Yamazaki, H. Shindo, Y. Nishiuchi, 2012, FEBS letters.

Solution structures and DNA binding properties of the N‐terminal SAP domains of SUMO E3 ligases from Saccharomyces cerevisiae and Oryza sativa

T. Yamazaki, M. Shimizu, H. Shindo, 2009, Proteins.

Preferential binding of E.coli histone-like protein HUα to negatively supercoiled DNA

F. Imamoto, M. Shimizu, H. Shindo, 1992 .

Preferential binding of E.coli histone-like protein HU alpha to negatively supercoiled DNA.

F. Imamoto, M. Shimizu, H. Shindo, 1992, Nucleic acids research.

Destabilization of nucleosomes by an unusual DNA conformation adopted by poly(dA)·poly(dT) tracts in vivo

T. Mori, M. Shimizu, T. Sakurai, 2000 .

Destabilization of nucleosomes by an unusual DNA conformation adopted by poly(dA) small middle dotpoly(dT) tracts in vivo.

M. Shimizu, T. Sakurai, H. Shindo, 2000, The EMBO journal.

The loop sequence plays crucial roles for isomerization of intramolecular DNA triplexes in supercoiled plasmids.

M. Shimizu, H. Shindo, U. Matsumoto, 1994, Journal of molecular biology.

31P‐NMR studies of DNA in nucleosome core particles

J. S. Cohen, H. Shindo, James D. McGhee, 1980, Biopolymers.

The binding specificity and affinity of E. coli integration host factor (IHF) are influenced by the flexibility of flanking regions of its recognition sites.

M. Shimizu, H. Shindo, U. Matsumoto, 1995, Biological and Pharmaceutical Bulletin.

Studies of individual carboxyl groups in proteins by carbon 13 nuclear magnetic resonance spectroscopy.

J. Cohen, H. Shindo, W. Egan, 1978, The Journal of biological chemistry.

Geometry of the phosphodiester backbone in the A form of deoxyribonucleic acid determined by phosphorus-31 nuclear magnetic resonance spectroscopy.

S. Zimmerman, H. Shindo, J. Wooten, 1981, Biochemistry.

Genomic footprinting of the yeast zinc finger protein Rme1p and its roles in repression of the meiotic activator IME1.

A. Mitchell, M. Shimizu, H. Shindo, 1998, Nucleic acids research.

Diversity of Linker Histone H1 and Higher Order Structure of Chromatin

H. Shindo, 2006 .

Involvement of the histidine residues in the pH-induced conformational change of histone H5.

K. Mita, M. Zama, H. Shindo, 1985, Archives of biochemistry and biophysics.

Separation of Phospholipids from Hen Egg Yolk by High-Speed Countercurrent Chromatography

H. Shindo, Y. Shibusawa, Y. Ito, 2005 .

Yeast Ume6p repressor permits activator binding but restricts TBP binding at the HOP1 promoter.

A. Mitchell, Keiko Takahashi, M. Shimizu, 2003, Nucleic acids research.

Yeast Ume 6 p repressor permits activator binding but restricts TBP binding at the HOP 1 promoter

A. Mitchell, Keiko Takahashi, M. Shimizu, 2022 .

Deletion of the yhhP Gene Results in Filamentous Cell Morphology in Escherichia coli

T. Yamazaki, T. Mizuno, E. Katoh, 2000, Bioscience, biotechnology, and biochemistry.

Letter to the Editor: NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease

S. Yokoyama, S. Shimotakahara, M. Kainosho, 2003 .

Characterization of the acetyl-chymotrypsin intermediate by 13C nuclear magnetic resonance spectroscopy.

J. Cohen, H. Shindo, C. Niu, 1977, Journal of the American Chemical Society.

CHAPTER 13 – Solid-State Phosphorus-31 NMR: Theory and Applications to Nucleic Acids

H. Shindo, 1984 .

Multiple conformations coexist and interchange in natural B DNA fibers.

T. Fujiwara, H. Akutsu, H. Shindo, 1984, Journal of molecular biology.

31P NMR Studies on the Structure and Dynamics of DNA in Hydrated Fibers

T. Fujiwara, H. Akutsu, H. Shindo, 1983 .

Dielectric properties of stereoregular poly(methyl methacrylates)

H. Shindo, I. Murakami, H. Yamamura, 1969 .

Effect of Sequence-Directed Nucleosome Disruption on Cell-Type-Specific Repression by α2/Mcm1 in the Yeast Genome

Mitsuhiro Shimizu, Yuichi Yamamoto, A. Mitchell, 2006, Eukaryotic Cell.

The linker histone homolog Hho1p from Saccharomyces cerevisiae represents a winged helix-turn-helix fold as determined by NMR spectroscopy.

T. Yamazaki, S. Shimotakahara, M. Shimizu, 2003, Nucleic acids research.

NMR structure of ubiquitin-like domain in PARKIN: gene product of familial Parkinson's disease.

S. Yokoyama, S. Shimotakahara, M. Kainosho, 2003, Journal of biomolecular NMR.

Preferential Hydration and B–A Transition of Deoxyribonucleic Acid in Ethanol–Water Mixtures

K. Gekko, H. Shindo, Takehiro Sakaki, 1988 .

The Reaction of Photo-excited Phenanthraquinone with Hydrogen Donors. The Behaviors of the Resulting 1,2-Photoadducts Studied by the CIDNP Technique

T. Maruyama, K. Maruyama, H. Shindo, 1971 .

Photochemical Reactions of Phenanthraquinone with Hydrogen Donors. An Investigation of the Reaction by CIDNP Method

T. Maruyama, K. Maruyama, H. Shindo, 1971 .

Simulation study on the disordered state of an Alzheimer's β amyloid peptide Aβ(12–36) in water consisting of random‐structural, β‐structural, and helical clusters

Junichi Higo, Narutoshi Kamiya, Jinzen Ikebe, 2007, Protein science : a publication of the Protein Society.

Direct evidence for a bimorphic structure of a DNA-RNA hybrid, poly(rA).poly(dT), at high relative humidity.

H. Shindo, U. Matsumoto, 1984, The Journal of biological chemistry.

Thermal unfolding of ribonuclease T1 studied by multi-dimensional NMR spectroscopy

S. Shimotakahara, A. Yamagishi, M. Kojima, 2004, Biological chemistry.

Thermal Unfolding of Ribonuclease T1 studied by NMR

A. Yamagishi, M. Kojima, H. Shindo, 2001 .

On the tyrosine residues of ribonuclease A.

J. Cohen, H. Shindo, W. Egan, 1978, The Journal of biological chemistry.

Analysis of Polyphenols from Hop Bract Region Using CCC

T. Kanda, T. Shoji, A. Yanagida, 2005 .

Comparison of elution behavior of catechins in high-performance liquid chromatography with that on high-speed countercurrent chromatography

A. Yanagida, Atsushi Shoji, H. Shindo, 2004 .

Proton NMR study on a histone-like protein, HU alpha, from Escherichia coli and its complex with oligo DNAs.

H. Kurumizaka, F. Imamoto, N. Goshima, 1993, Biological & pharmaceutical bulletin.

Kinetic and chlorine-35 nuclear magnetic resonance studies in the effect of chloride on the properties of chicken liver dihydrofolate reductase.

B. Kaufman, H. Shindo, S. Subramanian, 1981, Biochemistry.

CHARACTERIZATION OF THE ACETYL-CHYMOTRYPSIN INTERMEDIATE BY CARBON-13 NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

J. Cohen, H. Shindo, C. Niu, 1977 .

Structure and Dynamic Properties of a Ti-Binding Peptide Bound to TiO2 Nanoparticles As Accessed by (1)H NMR Spectroscopy.

T. Asakura, H. Shindo, Yu Suzuki, 2016, The journal of physical chemistry. B.

Conformational sampling of a 40-residue protein consisting of α and β secondary-structure elements in explicit solvent

Haruki Nakamura, Junichi Higo, Narutoshi Kamiya, 2007 .

The role of nucleosome positioning in repression by the yeast α2/Mcm1p repressor

M. Shimizu, H. Shindo, S. Saito, 2002 .

The role of nucleosome positioning in repression by the yeast alpha 2/Mcm1p repressor.

M. Shimizu, H. Shindo, S. Saito, 2002, Nucleic acids research. Supplement.

Tyrosine-specific dephosphorylation-phosphorylation with alkaline phosphatases and epidermal growth factor receptor kinase as evidenced by 31P NMR spectroscopy.

S. Taniguchi, H. Shindo, U. Matsumoto, 1987, Journal of biochemistry.

Chromatin structure of yeast minichromosomes containing triplet repeat sequences associated with human hereditary neurological diseases.

R. Wells, R. Fujita, M. Shimizu, 2001, Nucleic acids research. Supplement.

Distinction and similarity in the structure of histones H1 and H5 as indicated by 13C nuclear-magnetic-resonance spectroscopy.

K. Mita, M. Zama, H. Shindo, 1985, European journal of biochemistry.

Products of reaction catalyzed by purified rat liver guanylate cyclase determined by 31p NMR spectroscopy.

S. Tsai, V. Manganiello, M. Vaughan, 1980, Proceedings of the National Academy of Sciences of the United States of America.