Matteo De Chiara

发表

Genome evolution across 1,011 Saccharomyces cerevisiae isolates

Stefan Engelen, Karine Labadie, Patrick Wincker, 2018, Nature.

CRISpy-Pop: A Web Tool for Designing CRISPR/Cas9-Driven Genetic Modifications in Diverse Populations

A. Gasch, R. Wrobel, Michael Place, 2020, G3.

Analysis of Two-Component Systems in Group B Streptococcus Shows That RgfAC and the Novel FspSR Modulate Virulence and Bacterial Fitness

I. Margarit, G. Grandi, K. Doran, 2014, mBio.

Comparison of Phylogenetic Tree Topologies for Nitrogen Associated Genes Partially Reconstruct the Evolutionary History of Saccharomyces cerevisiae

G. Liti, F. Salinas, C. Martínez, 2019, Microorganisms.

Aborting meiosis overcomes hybrid sterility

S. Loeillet, A. Nicolas, Jia-Xing Yue, 2020, bioRxiv.

Whole-Genome Sequences of Nonencapsulated Haemophilus influenzae Strains Isolated in Italy

M. Pizza, M. Soriani, G. Torricelli, 2015, Genome Announcements.

A structurally driven analysis of thiol reactivity in mammalian albumins.

V. Venditti, A. Bernini, O. Spiga, 2011, Biopolymers.

Neisseria Adhesin A Variation and Revised Nomenclature Scheme

R. Rappuoli, V. Masignani, K. Jolley, 2014, Clinical and Vaccine Immunology.

Discordant evolution of mitochondrial and nuclear yeast genomes at population level

G. Liti, B. Barre, A. Friedrich, 2020, BMC biology.

Domestication reprogrammed the budding yeast life cycle

C. Taccioli, Karl Persson, J. Warringer, 2022, Nature Ecology & Evolution.

An Out-of-Patagonia dispersal explains most of the worldwide genetic distribution in Saccharomyces eubayanus

Francisco A. Cubillos, D. Thompson, G. Liti, 2019, bioRxiv.

Ploidy influences the functional attributes of de novo lager yeast hybrids

Mikko Arvas, Jia-Xing Yue, G. Liti, 2016, Applied Microbiology and Biotechnology.

Genome sequencing of disease and carriage isolates of nontypeable Haemophilus influenzae identifies discrete population structure

Claudio Donati, Rino Rappuoli, Matteo De Chiara, 2014, Proceedings of the National Academy of Sciences.

On the Trail of an Ancient Middle Eastern Ethnobotany: Traditional Wild Food Plants Gathered by Ormuri Speakers in Kaniguram, NW Pakistan

Z. Ullah, A. Pieroni, Matteo De Chiara, 2021, Biology.

Genome-Wide Association Study Reveals Host Factors Affecting Conjugation in Escherichia coli

N. Verstraeten, J. Michiels, J. Warringer, 2022, Microorganisms.

Transcriptional Activity and Protein Levels of Horizontally Acquired Genes in Yeast Reveal Hallmarks of Adaptation to Fermentative Environments

Francisco A. Cubillos, G. Liti, F. Cubillos, 2020, Frontiers in Genetics.

Domestication reprogrammed the budding yeast life cycle

C. Taccioli, Karl Persson, J. Warringer, 2020, bioRxiv.

Deconvolution of intergenic polymorphisms determining high expression of Factor H binding protein in meningococcus and their association with invasive disease

V. Scarlato, A. Biolchi, I. Delany, 2021, PLoS pathogens.

Aborting meiosis allows recombination in sterile diploid yeast hybrids

S. Loeillet, A. Nicolas, Jia-Xing Yue, 2021, Nature Communications.

Lager Yeast Design Through Meiotic Segregation of a Saccharomyces cerevisiae × Saccharomyces eubayanus Hybrid

Jia-Xing Yue, G. Liti, V. Vidgren, 2021, Frontiers in Fungal Biology.

Lager yeast design through meiotic segregation of a fertile Saccharomyces cerevisiae x Saccharomyces eubayanus hybrid

Jia-Xing Yue, G. Liti, Sandra Castillo, 2021, bioRxiv.

A yeast living ancestor reveals the origin of genomic introgressions

E. Gilson, Jia-Xing Yue, Karl Persson, 2020, Nature.

Genomic Analysis Reveals the Molecular Basis for Capsule Loss in the Group B Streptococcus Population

H. Tettelin, C. Donati, I. Margarit, 2015, PloS one.

Discordant evolution of mitochondrial and nuclear yeast genomes at population level

G. Liti, A. Friedrich, Joseph Schacherer, 2019, BMC Biology.

Telomeres are shorter in wild Saccharomyces cerevisiae isolates than in domesticated ones

E. Gilson, Jia-Xing Yue, G. Liti, 2022, bioRxiv.

Meiotic Cells Counteract Programmed Retrotransposon Activation via RNA-Binding Translational Repressor Assemblies.

Luke E. Berchowitz, Jia-Xing Yue, G. Liti, 2020, Developmental cell.

An Out-of-Patagonia migration explains the worldwide diversity and distribution of Saccharomyces eubayanus lineages

Francisco A. Cubillos, G. Liti, F. Cubillos, 2020, PLoS genetics.

The natural diversity of the yeast proteome reveals chromosome-wide dosage compensation in aneuploids

Christoph B. Messner, G. Liti, J. Berman, 2022, bioRxiv.

Ploidy influences the functional attributes of de novo lager yeast hybrids

Mikko Arvas, Jia-Xing Yue, G. Liti, 2016, Applied Microbiology and Biotechnology.

Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae

T. Cokelaer, Jia-Xing Yue, Jing Li, 2023, Nature Genetics.

Single nucleotide polymorphisms associated with wine fermentation and adaptation to nitrogen limitation in wild and domesticated yeast strains

F. Salinas, C. Martínez, Matteo De Chiara, 2023, Biological Research.

An integrative taxonomy approach reveals Saccharomyces chiloensis sp. nov. as a newly discovered species from Coastal Patagonia

Francisco A. Cubillos, Nicolas Agier, Matteo De Chiara, 2024, bioRxiv.

Meiotic Cells Counteract Programmed Retrotransposon Activation via RNA-Binding Translational Repressor Assemblies.

Luke E. Berchowitz, Jia-Xing Yue, I. Adams, 2020, Developmental cell.

Natural proteome diversity links aneuploidy tolerance to protein turnover

Christoph B. Messner, V. Demichev, M. Mülleder, 2024, Nature.