Chloé Chong

发表

A Case for a Human Immuno‐Peptidome Project Consortium

Ruedi Aebersold, Etienne Caron, Michal Bassani-Sternberg, 2017, Immunity.

Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes

George Coukos, David Gfeller, Philippe Guillaume, 2019, Nature Biotechnology.

Estimating the Contribution of Proteasomal Spliced Peptides to the HLA-I Ligandome*

Ilan Beer, Ioannis Xenarios, Markus Müller, 2018, Molecular & Cellular Proteomics.

Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes

Ioannis Xenarios, Uwe Ohler, Markus Müller, 2020, Nature Communications.

Deep motif deconvolution of HLA-II peptidomes for robust class II epitope predictions

George Coukos, David Gfeller, Philippe Guillaume, 2019, bioRxiv.

Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes

Brian J. Stevenson, Markus Müller, I. Xenarios, 2019, Nature Communications.

Deciphering HLA-I motifs across HLA peptidomes improves neo-antigen predictions and identifies allostery regulating HLA specificity

David Gfeller, George Coukos, Michal Bassani-Sternberg, 2017, bioRxiv.

Sensitive identification of neoantigens and cognate TCRs in human solid tumors

Brian J. Stevenson, G. Coukos, D. Speiser, 2021, Nature Biotechnology.

Deciphering HLA motifs across HLA peptidomes correctly predicts neo-antigens and identifies allostery in HLA specificity

G. Coukos, D. Gfeller, M. Solleder, 2017, bioRxiv.

High-Throughput, Fast, and Sensitive Immunopeptidomics Sample Processing for Mass Spectrometry.

M. Bassani-Sternberg, F. Marino, Chloé Chong, 2019, Methods in molecular biology.

High-throughput and sensitive immunopeptidomics platform reveals profound (cid:44)(cid:41)(cid:49)(cid:534) -mediated remodeling of the HLA ligandome

G. Coukos, D. Gfeller, Julien Racle, 2017 .

Identification of tumor antigens with immunopeptidomics

G. Coukos, M. Bassani-Sternberg, Chloé Chong, 2021, Nature Biotechnology.

Tumour-reactive T cell subsets in the microenvironment of ovarian cancer

G. Coukos, M. Donia, I. Svane, 2019, British Journal of Cancer.

Sensitive Immunopeptidomics by Leveraging Available Large-Scale Multi-HLA Spectral Libraries, Data-Independent Acquisition, and MS/MS Prediction

Brian J. Stevenson, Markus Müller, G. Coukos, 2021, Molecular & cellular proteomics : MCP.

High-throughput and Sensitive Immunopeptidomics Platform Reveals Profound Interferonγ-Mediated Remodeling of the Human Leukocyte Antigen (HLA) Ligandome*

Markus Müller, G. Coukos, D. Gfeller, 2017, Molecular & Cellular Proteomics.

Cell-autonomous inflammation of BRCA1-deficient ovarian cancers drives both tumor-intrinsic immunoreactivity and immune resistance via STING

Brian J. Stevenson, F. Martinon, M. Delorenzi, 2021, Cell reports.

Improved NGS-based detection of microsatellite instability using tumor-only data

A. C. Marques, V. Hervieu, Xiaobin Xing, 2022, Frontiers in Oncology.

Estimating the Contribution of Proteasomal Spliced Peptides to the HLA-I Ligandome

Markus Müller, I. Xenarios, G. Coukos, 2018, bioRxiv.

The immunopeptidome landscape associated with T cell infiltration, inflammation and immune editing in lung cancer

Brian J. Stevenson, Emma Ricart Altimiras, G. Coukos, 2023, Nature Cancer.