P. Chain

发表

Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis.

C. Médigue, J. Lamerdin, F. Larimer, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Complete Genome Sequence of Yersinia pestis Strains Antiqua and Nepal516: Evidence of Gene Reduction in an Emerging Pathogen

Gary L. Andersen, Frank Larimer, Ping Hu, 2006, Journal of bacteriology.

Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing.

P. Chain, C. Lo, G. Xie, 2010, Molecular oral microbiology.

Phylogenetic and metagenomic analysis of Verrucomicrobia in former agricultural grassland soil.

G. Kowalchuk, E. Kuramae, J. V. van Veen, 2010, FEMS microbiology ecology.

Bacterial genome annotation.

S. Starkenburg, P. Chain, Tracey Freitas, 2012, Methods in molecular biology.

Advances and Challenges in Fluorescence in situ Hybridization for Visualizing Fungal Endobacteria

Andrew C. Pawlowski, Demosthenes P. Morales, J. Werner, 2022, Frontiers in Microbiology.

oriT-Directed Cloning of Defined Large Regions from Bacterial Genomes: Identification of theSinorhizobium meliloti pExo Megaplasmid Replicator Region

T. Finan, B. Golding, I. Hernández-Lucas, 2000, Journal of bacteriology.

Whole-Genome Analysis of the Methyl tert-Butyl Ether-Degrading Beta-Proteobacterium Methylibium petroleiphilum PM1

S. Lucas, P. Richardson, F. Larimer, 2007 .

Islands Within Islands: Bacterial Phylogenetic Structure and Consortia in Hawaiian Lava Caves and Fumaroles

A. Decho, Jimmy H. W. Saw, Tatyana Zamkovaya, 2022, Frontiers in Microbiology.

Genome of the Cyanobacterium Microcoleus vaginatusFGP-2, a Photosynthetic Ecosystem Engineer of Arid Land Soil Biocrusts Worldwide

C. Kuske, F. Garcia-Pichel, S. Starkenburg, 2011, Journal of bacteriology.

Genome of Ochrobactrum anthropi ATCC 49188T, a Versatile Opportunistic Pathogen and Symbiont of Several Eukaryotic Hosts

Dorothy M. Lang, S. Malfatti, R. Ugalde, 2011, Journal of bacteriology.

Whole-Genome Analysis of Methyl tert -Butyl Ether (MTBE)- 1 Degrading Beta-Proteobacterium Methylibium petroleiphilum PM1

S. Lucas, F. Larimer, K. Scow, 2006 .

De Novo Identification of Regulatory Regions in Intergenic Spaces of Prokaryotic Genomes

I. Ovcharenko, P. Chain, Emilio Garcia, 2007 .

Molecular characterization of L-413C, a P2-related plague diagnostic bacteriophage.

A. G. Bobrov, V. Motin, V. Lao, 2008, Virology.

Whole-Genome-Based Phylogeny and Divergence of the Genus Brucella

Paul Keim, Talima Pearson, Jeffrey T. Foster, 2009, Journal of bacteriology.

The complete genome sequence of Francisella tularensis, the causative agent of tularemia

Anders Sjöstedt, Ying Liu, Peter D Karp, 2005, Nature Genetics.

Whole-Genome Analyses of Speciation Events in Pathogenic Brucellae

S. Malfatti, F. Larimer, R. Ugalde, 2005, Infection and Immunity.

The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti

Kim Wong, J. Gouzy, A. Pühler, 2001, Proceedings of the National Academy of Sciences of the United States of America.

Array2BIO: from microarray expression data to functional annotation of co-regulated genes

Ivan Ovcharenko, Gabriela G. Loots, Patrick S. G. Chain, 2006, BMC Bioinformatics.

Array2BIO: A Comprehensive Suite of Utilities for the Analysis of Microarray Data

I. Ovcharenko, G. Loots, S. Mabery, 2006 .

Divergence among Genes Encoding the Elongation Factor Tu of Yersinia Species

D. K. Boudreau, M. Boissinot, P. H. Roy, 2008, Journal of bacteriology.

Multidrug-resistant (MDR) Klebsiella pneumoniae clinical isolates: a zone of high heterogeneity (HHZ) as a tool for epidemiological studies.

R. Bonomo, K. Hujer, G. Xie, 2012, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Identification of MglA-Regulated Genes Reveals Novel Virulence Factors in Francisella tularensis

David S. Weiss, Charles C. Kim, Stephanie Malfatti, 2006, Infection and Immunity.

Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria

M. Lynch, S. Malfatti, T. Doak, 2013, Proceedings of the National Academy of Sciences.

The Genome Sequence of Yersinia pestis Bacteriophage φA1122 Reveals an Intimate History with the Coliphage T3 and T7 Genomes

I. Molineux, P. Chain, J. Elliott, 2003, Journal of bacteriology.

Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments

S. Malfatti, F. Larimer, L. Hauser, 2008, Proceedings of the National Academy of Sciences.

Multiple Cases of Bacterial Sequence Erroneously Incorporated Into Publicly Available Chloroplast Genomes

P. Chain, H. Daligault, Erick S LeBrun, 2022, Frontiers in Genetics.

Pestoides F, an atypical Yersinia pestis strain from the former Soviet Union.

Dorothy M. Lang, S. Malfatti, F. Larimer, 2007, Advances in experimental medicine and biology.

Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing

E M Rubin, R. Sorek, E. Rubin, 2009, Proceedings of the National Academy of Sciences.

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

Patricia P. Chan, M. Könneke, T. Lowe, 2010, Proceedings of the National Academy of Sciences.

The Genome of the Obligately Intracellular Bacterium Ehrlichia canis Reveals Themes of Complex Membrane Structure and Immune Evasion Strategies

N. Kyrpides, P. Richardson, N. Ivanova, 2006, Journal of bacteriology.

Inaugural Article: Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility

Vincent J. Denef, Luke E. Ulrich, K. Konstantinidis, 2006 .

Complete Genome Sequence of Yersinia pestis Strains Antiqua and Nepal516: Evidence of Gene Reduction in an Emerging Pathogen

G. Andersen, S. Malfatti, F. Larimer, 2006, Journal of bacteriology.